Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1526 ATGACGTCAAGTGTTGATGAAGATGAGCATGAGAGGGAGGAGCCAGCCATGGAGTCTGGCGAATCCGAGGAAGGAGGAATAGCTGCCCGGGAATTCTGTGCCAATGGGGTCTGCATAAAAACAGCAGAAGTAGAAGCAAAGCTTGATGAGGGAAATATCCAAGAGGCAGAGTCTTCATTACGGGAAGGGTTATCTCTCAATTTTGAGGAAGCCAGAGCCCTTCTTGGAAAGTTGGAGTATCAGAGAGGTAATGTTGAAGGTGCTCTACGTGTGTTTGATGGTATAGATCTCCAAGCAGCTATTCAACGATTACAGCCTTGCGTCGCTGAGAAGACGCCTCCAAAAAAAGGACGTACCCGCCCTGAATCTCAACATTCAGTTTCGCAGCATGCTGCAAACCTGGTGCTTGAAGCCATATATTTAAAAGTGAAGTCACTTCAGAAGCTAGGGAGAGTAACTGAGGCTGCTGATGAGTGTACAAGTGTACTTGATGCCGTAGAGAAGATATTCAGCCAAGGAATTCCTGATGGCCAAGTGGATAGTAGATTGCAAGAAACAATCAGTCAGGCTGTAGAACTCCTCCCTGATCTATGGAAACAGGCTGGATGTTTCCAGGAAGCAATATCTGCCTATAGGCGTGCCCTCTTAAGCCATTGGAATGTCAGTGATGAATGTTGTGCTAGGATCCAGAAAGGATTTGCTGTATTATTGCTTTACAGTGGAGTAGACGCTGGTCCTCCTAGTTTAGCTGTTCAACTTGAAGGTTCATATGTACCGAAAAATAATTTGGAAGAAGCAATTCTACTTCTGATGCTTCTTGTGAAGAAATCTTACCTTGGTAAGATAAAATGGGATCCATCAGTGATGGAGCACCTAATATTTGCTCTATCTTTATGCAGCCAGACTTCTGTTTTAGCAAAACAACTTGAAGAGGTCATGCCTGGAGTATATCACCGTGTAGAACGTTGGAAGTATTTAGCTCTTTGTTATTGTGCAGCAGGACAGGATAAAGTTGCCTTGAATCTTCTAAGAAAGTCTCTACACAAACATGAGCAACCAGATGATGTGGCAGCCTTATTACTGGCTGCCAAGATCTGCAGTGAGGATCCTTATCTTGCTGCTGAAGGTGTTGATTATGCCCAGCGGGCAATGAACAATTGTATAGGAAATGAAGAGCATTTAAAGGGTGTGGGTCTTCGCTTGTTAGGTCTTTGTTTGGGAAAACAAGCCAAAATGTCTTCCTCTGACTTTGAGAGGTCCCGTCTTCAGTCAGAGGCATTGAAATCTCTTGAGGCAGCAAGTGGTTTGGAGAGCAATAACTTAGATTTGATGCTTGAGTTAGGAGTACAATATTCAGAATATCGGAATTTGAATGCTGCTTTGCAATATGCGAAGAAGTTCATTGATGAAACCGGTGGCTCTGTCTTAAAAGGCTGGCAGTTGCTTGCGCTTGTTTTGTCTGCCCAAAAGAGGTTTTCAGAGGCTGAAGTGGTCACTGATGCTGCAATGGATGAGACCACAAAATGGGAACAAGGACCACTTCTCAGACTCAAGGCAAAGCTGAAGATATCTCAATCATTACATATGGATGCTATTGAAACTTACCGTTATCTCCTTGCATTAGTTCAAGCACAAAAGAAATCCTTTGGGCCTCTCAGAATTGTCCCCCAGGTTGAAGATGATAAATTGAATGAATTTGAAGTTTGGAACGGTCTAGCCAATTTATACTCCAGCCTTTCACATTGGAAAGATGCAGAGATATGTCTAGGAAAAGCAAAAGAGCTGAAAGAGTTCTCCCCAGAAGTACTACATACCGAAGGTCTAATGTGTGAAGGACGTGAGAAAATACAAGAAGCTCTAGCTGCTTATATTAATGCTCTCCTACTCGAACCGACTTATGTTCATTGCAAGGTTTTGATTGGCGCTCTTTGGTCGAAAGCGGGCCCGGATGCATTGCCTATAGCAAGAAGCTTACTTTCAGACGCGTTGAGATTAGATCCTACCAACCGTAAGGCTTGGTTTTACTTGGGGGTGATTCATAGGGACGAAGGACGAATGGCTGATGCTATAGACTGCTTCCAGGCAGCCGCCATGCTTGAAGAATCAGATCCCATTGAAAGCTTCAGCAGTATTCTCTAG 2139 43.85 MTSSVDEDEHEREEPAMESGESEEGGIAAREFCANGVCIKTAEVEAKLDEGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPCVAEKTPPKKGRTRPESQHSVSQHAANLVLEAIYLKVKSLQKLGRVTEAADECTSVLDAVEKIFSQGIPDGQVDSRLQETISQAVELLPDLWKQAGCFQEAISAYRRALLSHWNVSDECCARIQKGFAVLLLYSGVDAGPPSLAVQLEGSYVPKNNLEEAILLLMLLVKKSYLGKIKWDPSVMEHLIFALSLCSQTSVLAKQLEEVMPGVYHRVERWKYLALCYCAAGQDKVALNLLRKSLHKHEQPDDVAALLLAAKICSEDPYLAAEGVDYAQRAMNNCIGNEEHLKGVGLRLLGLCLGKQAKMSSSDFERSRLQSEALKSLEAASGLESNNLDLMLELGVQYSEYRNLNAALQYAKKFIDETGGSVLKGWQLLALVLSAQKRFSEAEVVTDAAMDETTKWEQGPLLRLKAKLKISQSLHMDAIETYRYLLALVQAQKKSFGPLRIVPQVEDDKLNEFEVWNGLANLYSSLSHWKDAEICLGKAKELKEFSPEVLHTEGLMCEGREKIQEALAAYINALLLEPTYVHCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEESDPIESFSSIL 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80489946 80496250 + Hsped.01g15260.1 Hepe01g1526 560636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1526 712 MobiDBLite consensus disorder prediction 1 26 - -
Hepe01g1526 712 SUPERFAMILY TPR-like 318 502 IPR011990 GO:0005515(InterPro)
Hepe01g1526 712 SMART tpr_5 476 509 IPR019734 GO:0005515(InterPro)
Hepe01g1526 712 SMART tpr_5 600 633 IPR019734 GO:0005515(InterPro)
Hepe01g1526 712 SMART tpr_5 566 599 IPR019734 GO:0005515(InterPro)
Hepe01g1526 712 SMART tpr_5 320 353 IPR019734 GO:0005515(InterPro)
Hepe01g1526 712 SMART tpr_5 670 703 IPR019734 GO:0005515(InterPro)
Hepe01g1526 712 Gene3D Tetratricopeptide repeat domain 650 708 IPR011990 GO:0005515(InterPro)
Hepe01g1526 712 PANTHER PROTEIN NPG1 17 710 IPR043376 -
Hepe01g1526 712 SUPERFAMILY TPR-like 516 700 IPR011990 GO:0005515(InterPro)
Hepe01g1526 712 Gene3D Tetratricopeptide repeat domain 373 500 IPR011990 GO:0005515(InterPro)
Hepe01g1526 712 ProSiteProfiles TPR repeat profile. 670 703 IPR019734 GO:0005515(InterPro)
Hepe01g1526 712 MobiDBLite consensus disorder prediction 1 19 - -
Hepe01g1526 712 FunFam NPG1 557 706 - -
Hepe01g1526 712 Gene3D Tetratricopeptide repeat domain 501 647 IPR011990 GO:0005515(InterPro)
Hepe01g1526 712 Gene3D Tetratricopeptide repeat domain 41 368 IPR011990 GO:0005515(InterPro)
Hepe01g1526 712 Pfam Tetratricopeptide repeat 42 95 - -
Hepe01g1526 712 Pfam Tetratricopeptide repeat 654 697 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1526 Hepe-Chr1:80489946 Hepe05g1675 Hepe-Chr5:66675980 1.10e-195 dispersed
Hepe01g1526 Hepe-Chr1:80489946 Hepe06g1909 Hepe-Chr6:70244692 4.57e-198 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1526 K21843 - csv:101206641 1260.36