Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g1530 | ATGGTTGAATTAGACTTTGAAATCCCATCTGCTTTCGATGCATTCGCTGACGCCAAGGATTCTGATGCCTCCGGAACAAAAGAGTATGTTCATATCCGCGTCCAGCAGAGGAATGGTAGAAAGTGCTTGACTACTGTTCAGGGTCTCAAGAAAGACTTGAGCTACGAGAGGATCCTGAAAGACGTCAAAAAGGAATTCTGCTGTAATGGCAACGTCGTCCAAGACAAAGATTTGGGGAAGGTAATTCAACTTCAGGGCGATCAGCGGAAGAACGTCTCTCAATTCCTGGTTCAGGCTGGACTTGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA | 339 | 45.43 | MVELDFEIPSAFDAFADAKDSDASGTKEYVHIRVQQRNGRKCLTTVQGLKKDLSYERILKDVKKEFCCNGNVVQDKDLGKVIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF | 112 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 80535841 | 80537526 | + | Hsped.01g15300.1 | Hepe01g1530 | 560640 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g1530 | 112 | PIRSF | Transl_init_SUI1_Euk | 1 | 112 | IPR005874 | GO:0003743(InterPro) | |
Hepe01g1530 | 112 | SUPERFAMILY | eIF1-like | 5 | 112 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe01g1530 | 112 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 2 | 112 | - | GO:0003723(PANTHER) | |
Hepe01g1530 | 112 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 30 | 100 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe01g1530 | 112 | Pfam | Translation initiation factor SUI1 | 27 | 101 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe01g1530 | 112 | NCBIfam | translation initiation factor SUI1 | 7 | 112 | IPR005874 | GO:0003743(InterPro) | |
Hepe01g1530 | 112 | CDD | eIF1_SUI1 | 28 | 111 | IPR005874 | GO:0003743(InterPro) | |
Hepe01g1530 | 112 | FunFam | Eukaryotic translation initiation factor SUI1 | 2 | 112 | - | - | |
Hepe01g1530 | 112 | Gene3D | - | 2 | 112 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1272 | Hepe-Chr1:77992758 | Hepe01g1530 | Hepe-Chr1:80535841 | 2.02e-73 | dispersed | |
Hepe01g1530 | Hepe-Chr1:80535841 | Hepe02g0211 | Hepe-Chr2:2104628 | 2.06e-55 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g1530 | K03113 | - | csv:101202908 | 206.838 |