Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1565 ATGAAAGGAAGTTTGAAGAAGTTGTTCCAGTGGATGAGGAATGTTGGGAAGAAGAGATATGGTGGTGAAGTGAAGGCAAAGAAGGTTTACAGGTGGGGGAAATCTGGAGTCCGATTCAACGAAGAGGGCGGGGCAGGTAAAGGCGTCGGTTGCACGTGTGCAAGTTGTGATTCACACGTATGGTTTGTTGTAATTGTATTATGCTTGACTGGTGCCACCATGGGCTTCTACACAGTAAAATGGCAATGGCTACTGATTCTTCACATTGTACCGCTTTGCATGCTAATCAGCAGAAGTAGTGGTATCAACTCTGATGGTGAGGCACTTTTGAGCTTCAGAGCAGCAATTCTTGATTCTGATGGTGTTCTTCTTCAATGGAAGCCAGAGGAACCCCATCCTTGTAAATGGAAAGGAGTAACATGTGATCCAAAAACTAAGAGAGTGATATATCTGAGTCTTCCTTATCACAAACTTAGTGGATCTTTATCCCCTGAACTTGGAAAGCTGGACCACCTAAAACTTTTAGCTCTTCATGACAATAACATTTATGGGACAATTCCATCAGAATTAGGGAATTGCTCACAGATGCAGGGAATGTACCTGCAGGGTAATTACTTTAGTGGGTTCATTCCCAATGAATTAGGGAATCTTTCGGCACTTAAAAATTTAGATATTTCAAGTAACTCACTCGGTGGTAGTATTCCCATCTCGCTTGGGAAGTTGGACAAGCTTATTACTCTAAATGTGTCTGCCAATTTTCTGGTTGGATCAATACCAAATGTTGGCGTGCTAATCAGCTTCTCGGAAAGCTCATTTCTTGGAAACCGTGGCTTGTGCGGGAAGCAAATAAATGTTATGTGCAAAGATGACAAAGAGGGACCTGGAGCAAATGATTCACCATTCTCAGTGCAAAATCAAATTGGGAGGAAGAAGTACTCTGGCCGACTACTTATAAGTGCTTCCGCAACTGTGGGTGCTTTACTGCTGGTTGCCCTAATGTGTTTCTGGGGTTGCTTTCTGTATAAAAAGTTTGGCAAAAATGACAATAAAGGTCTAGTGCTGGACGTTTGTGGAGGTGCTTCTGTTGTAATGTTTCACGGAGACTTGCCATACTCATCTAAAGATATTATTAAGAAATTTGAGACATTGAATGAAGAACACATAATAGGATGTGGGGGCTTTGGAACCGTGTACAAGCTTGCAATGGATGATGGCAGTGTTTTTGCCTTAAAAAGAATTGTAAAATTGAATGAGGGCTTTGATCGTTTTTTTGAGAGAGAGCTCGAAATCCTTGGAAGCATAAAACACAGATTCCTTGTGAATCTGCGAGGATATTGCAATTCTCCTACATCAAAGCTGTTAATTTATGATTTCCTTTCTGGAGGCAGCCTTGATGAGGCATTACACGGCGTACGTACCGAAGTATCTGAGCAACTAGACTGGGATGCACGCTTAAATATCATCATGGGAGCTGCAAAGGGACTTGCATATTTGCATCATGATTGCTCTCCGCGGATCATTCACCGAGACATAAAATCAAGCAACATTTTGCTTGATGCTAATTTGGATGCTCGAGTTTCTGATTTTGGACTTGCCAAGCTTTTAGAGGATGAAGAATCACATATCACAACTATTGTTGCAGGAACATTTGGTTATCTGGCTCCTGAGTATATGCAAAGTGGTAGAGCTACTGAAAAGTCTGATGTATACAGTTTTGGGGTATTGGTACTTGAAGTGTTGAGTGGCAAACGTCCCACCGATGCGTCATACATTGAAAAGGGACTAAACATTGTTGGTTGGTTAAACTTTCTGGTCACAGAGAATCGACAACGACAAATAGTAGACTTACAGTGCGAGGGCATGCAAACAGAGAGCCTCGACGTGTTGCTTTCGGTTGCCATCCAATGTGTTTTGTCGAGTCCAGAGGATCGACCAACGATGCACAGGGTGGTCAAGATACTGGAATCTGAGATTATGACTCCATGCCCAAGTGATTTCTATGATACAGATTAA 2013 42.18 MKGSLKKLFQWMRNVGKKRYGGEVKAKKVYRWGKSGVRFNEEGGAGKGVGCTCASCDSHVWFVVIVLCLTGATMGFYTVKWQWLLILHIVPLCMLISRSSGINSDGEALLSFRAAILDSDGVLLQWKPEEPHPCKWKGVTCDPKTKRVIYLSLPYHKLSGSLSPELGKLDHLKLLALHDNNIYGTIPSELGNCSQMQGMYLQGNYFSGFIPNELGNLSALKNLDISSNSLGGSIPISLGKLDKLITLNVSANFLVGSIPNVGVLISFSESSFLGNRGLCGKQINVMCKDDKEGPGANDSPFSVQNQIGRKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDNKGLVLDVCGGASVVMFHGDLPYSSKDIIKKFETLNEEHIIGCGGFGTVYKLAMDDGSVFALKRIVKLNEGFDRFFERELEILGSIKHRFLVNLRGYCNSPTSKLLIYDFLSGGSLDEALHGVRTEVSEQLDWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDANLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLVLEVLSGKRPTDASYIEKGLNIVGWLNFLVTENRQRQIVDLQCEGMQTESLDVLLSVAIQCVLSSPEDRPTMHRVVKILESEIMTPCPSDFYDTD 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80849149 80864246 + Hsped.01g15650.1 Hepe01g1565 560675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1565 670 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 102 264 - -
Hepe01g1565 670 SUPERFAMILY Protein kinase-like (PK-like) 369 654 IPR011009 -
Hepe01g1565 670 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 459 665 - -
Hepe01g1565 670 Gene3D Phosphorylase Kinase; domain 1 360 458 - -
Hepe01g1565 670 SMART serkin_6 383 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1565 670 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 357 458 - -
Hepe01g1565 670 Pfam Leucine Rich Repeat 171 193 IPR001611 GO:0005515(InterPro)
Hepe01g1565 670 Pfam Leucine Rich Repeat 220 241 IPR001611 GO:0005515(InterPro)
Hepe01g1565 670 Pfam Leucine Rich Repeat 199 217 IPR001611 GO:0005515(InterPro)
Hepe01g1565 670 ProSitePatterns Protein kinases ATP-binding region signature. 389 415 IPR017441 GO:0005524(InterPro)
Hepe01g1565 670 SUPERFAMILY L domain-like 102 265 - -
Hepe01g1565 670 Gene3D Ribonuclease Inhibitor 102 289 IPR032675 -
Hepe01g1565 670 Gene3D Transferase(Phosphotransferase) domain 1 459 661 - -
Hepe01g1565 670 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 256 656 IPR050647 -
Hepe01g1565 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1565 670 Pfam Leucine rich repeat N-terminal domain 103 142 IPR013210 -
Hepe01g1565 670 Pfam Protein kinase domain 385 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1565 670 ProSiteProfiles Protein kinase domain profile. 383 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1477 Hepe-Chr1:80076338 Hepe01g1565 Hepe-Chr1:80849149 3.09e-97 dispersed
Hepe01g1565 Hepe-Chr1:80849149 Hepe07g0840 Hepe-Chr7:10597574 5.16e-286 dispersed
Hepe02g1245 Hepe-Chr2:15550047 Hepe01g1565 Hepe-Chr1:80849149 5.60e-06 dispersed
Hepe01g1565 Hepe-Chr1:80849149 Hepe07g2279 Hepe-Chr7:67118446 1.27e-162 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72478 PF00069 Pkinase 3.70E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1565 - - - 0.0