Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1585 ATGGCGGCAGCGGTCGTAGGAGGTGGTGGTAATGGAGGCGGTTTGATGACCAGCGGTGGAGATGTGTCGAAAGCGCATGCGGCTATGGCTTTGGTGCAAGTTATCAATGGAGGTTACCATGTTATCACCAAAGTCGCCCTCAATGTTGGGATGAATCAACTCGTCTTTTGTTTGTTCCGCGACTTGTTGGCTCTCGCGATTCTTGCTCCTGTCGCTTATGTTCGGGAGAAGCGGGTTCGTTTGCCTATGACTCGAGACCTCCTCGTATCGTTCTTCGTTCTTGGTTTAACGGGGATTTTTGGTAACCAACTTCTCTTTCTTGTTGGACTTGGCTACACTAATCCAACTTATGCTGCTGCCATACAGCCTTCCATTCCGGTTTTTACATTCCTTTTTGCTGTTATGATGGGCACAGAGACTGTGAACATCCTCAAACTGGAAGGACAGGCAAAGGTTGGAGGTACACTCGTTTGTGTCGCTGGTGCCATATTTATGGTTTTATTTCGTGGTCCAGCTTTGGTTGGAAGCAGCGAGTCTGACTTGATGTCGCTTAACGAAATAAGTGCAAGGGGTCAGCCAGAGCCTGCTGGATGGCTACTGTCTAACTTCCTGGAGTATGGATTGGATCATTTTCACGTTGGGGTTTTATGCTTGATAGGGAACTGTATGTGCATGGCTGCTTTCTTGGCTATCCAGGCACGGGTGTTAAAGAAGTATCCTGCCAACTTATCGGTCACAGCATATTCTTATTTATTTGGTGCTATACTGATGGTGATCACATCTTTCTTCATGACCAACGAATCCACAGACTGGAATTTGACGCAATCAGAGTTTTTTGCTGTCCTTTATGCTGGAATTTTTGCATCTGCCATAAATTATGGACTCTTGACATGGTGCAATAAAATATTGGGGCCTTCATTGGTCGCTCTTTACAATCCGCTTCAACCTGCAGCGTCGGCGCTGTTGTCAAGAGTTTTCATAGGAAGCCCTATTTATCTTGGAAGTGTTTTGGGGGGATCTCTTATAATTGCTGGTCTTTATTTGGTTACTTGGGCGTCGCATAAGGAACGACAAACGACTCCAGTTTTGCTATCACATTCATCCAGGTCCTCCGAACCACTTATTCACAAAGATGCATTGACTAACAAGTTTGCTTATCAGATAGGACACATTTTCTCCGGGCCTGCCTCTTCACTCAAATCTGTAGATTAG 1212 45.71 MAAAVVGGGGNGGGLMTSGGDVSKAHAAMALVQVINGGYHVITKVALNVGMNQLVFCLFRDLLALAILAPVAYVREKRVRLPMTRDLLVSFFVLGLTGIFGNQLLFLVGLGYTNPTYAAAIQPSIPVFTFLFAVMMGTETVNILKLEGQAKVGGTLVCVAGAIFMVLFRGPALVGSSESDLMSLNEISARGQPEPAGWLLSNFLEYGLDHFHVGVLCLIGNCMCMAAFLAIQARVLKKYPANLSVTAYSYLFGAILMVITSFFMTNESTDWNLTQSEFFAVLYAGIFASAINYGLLTWCNKILGPSLVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHKERQTTPVLLSHSSRSSEPLIHKDALTNKFAYQIGHIFSGPASSLKSVD 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81061878 81066804 + Hsped.01g15850.1 Hepe01g1585 560695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1585 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 356 - -
Hepe01g1585 403 PANTHER WAT1-RELATED PROTEIN 27 365 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Hepe01g1585 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 169 - -
Hepe01g1585 403 Pfam EamA-like transporter family 27 148 IPR000620 GO:0016020(InterPro)
Hepe01g1585 403 Pfam EamA-like transporter family 214 350 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1585 Hepe-Chr1:81061878 Hepe10g0597 Hepe-Chr10:7316847 7.48e-74 dispersed
Hepe01g1585 Hepe-Chr1:81061878 Hepe01g1647 Hepe-Chr1:81687419 2.16e-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1585 - - - 0.0