Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1589 ATGCTGAAGTCGAAGCCCTTCGCCGGAGCCAATGTGTTCGTGTCCCGTAATCTCGTTGCTCCGGAGATATTCGACGCTCTTCACGACGCTTTGAAGCAGAATGGGGCTCAGGTCTTCCTCTGTTGCGATCCCTCCCGAAACGGGCCGAATGACTATCATGTTATCTCCTCCGCCGATCACGAAAAGTTTGAGGATCTTCGCGCGAAGAGATGCACTTTGCTAGGTCCTCAGTGCGTGCTTTCATGTGCAAAAGAGTACAGACCCCTTCCTCAACAGGGTTTTACTTGCTGCCTTGCTTTGGATGGTGTGAAAATTCTGGCATCCGGTTTTCAGGCGGATGAAAAGGTTGAGATAGAGAAGTTAGTTACTGCAATGGGAGGAATATTGCATTCGAAAGCATCTCTGGATGTCACCTTTGTCATCGTGAAGAATGTTTTGGCTGCAAAATACAAGTGGGCACTAAACATTTCAAAGAAACCAATTGTCACAATTGCTTGGTTACAACAGTGCTGGATTGAACATCGTGTAGTGCCTCAGGAGGGATATCGAGTCCTTCCATTTTCTGGGTTGAATATTTCGGTATCTAGAATTCCAGCAGATGAGCGCAAGGAGATTGAAAAGCTTATCTTGCTAAATGGTGGAAGATATTCTGCTGATCTTACAAGAAAGTGTACACATTTGATATGTATTATATCCTTTTCTCCTGAAGGTGACAAGTACAAGGTTGCACGAACATGGGGCCATATCAATATTGTAGCTCGGAAATGGTTTGATCAATCCATAGCTAGAAGAGCATGTCTTAATGAGGAGTCGTACCCTGTTGGTTGCGTTTCTGGAACTTCAAATAAAATGGCAAGGGGTTGCTTGACTGCTCACAATAGCCAAGAAAAGGTTATTGGGAACTTGCAAGCTGCACCCTCCTCCTTTATTGCCGATTCAGCAGTTTCTGGCCCTGGGTTTTCAGATATGGATTTAGAAGCTACTCTTTCACAGAGCACATCTATGTTTTCAGATTCTTCTCATTTTATAAAGGAGGTTGTAGTTGAAGTGCCAGTTACAATGCCAAAGGACGAAGCAAGCACTGATAATTGTTTTGCAAATGACTTCCAATCTGAAGACAATGACCTATATCTGTCAGCATGTAGAATAAAAGTTGTTGGGTTTGAAGCTTCTGAGATGCGCAAGATTGTGAATATGATTCGCAGTGGTGGAGGCTCCCGGTACATGCTGTTCAATGACAAGTTAACACACATAATAGTTGGAAATCCGTCGGAAATGGAGAAAAAGGAGGTAAGAGATATTGCAGCTTCAGGTGTCATCCATGTGGTTAGAACCACTTGGCTTGAGGATTGTGATCGTCAGAAGAAGGAGATCCCTGTTCTTAGCAGACATATAGCCTATGATGAACTTATTCCTAAAGGTTTCATATCATCCAGTAAAACAAGCAGCATCGTTATGGATCAGAATAAAGTTTCTAATGTTCATCCAATCATGCCGTCAAATGAATTGGAAGGAAATATTCATGTTAGAACTGGAAAGACATCAATGATAGAGGAAAAAATTCAAGAAAAAAGTGAAGCAAATATGAGTGGAGACAGGACCATTAAATTATCCCAGAAAAGCCAACCTTCTGTAGCAAATGGTAGAAACAGGAGTCAAGAAAAGATGCAGCGTGATTTCATGGATACAAATGGGAAGTCATCATGTGTGTTTAAGGGGAAATTATTTTGGTTTTCTAGTTCCTTTCCAGAAGATCGGAGAGCTGAAATTGTTGAATGGATAAATCAAGGGGGAGGGGAGGTTGTTGAGGATAATATGAAACAGAAAGTGCACTTCACTGTTGAAAGTCATGGTGAGGCTCCAAGGAGTGCAGATGTTCATACTACATGCGTGTCAAGTCATTGGGTCCGATCATGTTTAGAGGATGGATGCTTGCGGGATACCAATGGGCACATTCTCTACTCTCCACTTCCTTGTTGTGTCCCTTTGCCTGGGTTTAAAAATATTCGGTTCTGTGTTTCACAATATGAAGATAAAGATAGAGTATTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGTTGACAAAGAAGGTAACCCATCTAATATGCAAGTTTTCCGATGGGCCAAAGTATGAAGCCGCTTGTAAATGGGGAATACATTCAATTACAGCAGAATGGATATATGAGTGCGTCAGACAGAGTAAGATTGTTTCTCTTGATTTGTATCGTCCAAAAGAAGTTACAGCTCAAGACAGAGAGGCAGGCTTATGCACTGTAAGTCAGTTTCCTACTCAAGCTGTCCAAATGATAGCCGGTGAAAGTCAATCTCAGTTCCCTATCCGTTCTGCTATCCTGAGAGACCGATCAGCTGGAACTAACAGTAGCTCTATGGGAGAAGTTGAAAAATTAAGTTTTTCTAATAAAAGGCTCAAGTATCTTGACGAAGCTATACAAAAGCCTCCACTTTTTGTTGGAAACAGTCTCACTCCTTTTGACTGCAATTTGAACGCCACAAGACAAACTACATCAAAATCTTCTGTAGTAACTTCACGTGTTCCTGATGTCGCTTCCGCAATTGAGGACTTGTTGGAGCAGACAACTAAGATTCATGATCAGAAGTCACCTGGAAAGACTGGCTGCGACAAAGGTATTTTCCCGCCTCACTGTTCGGTCATTGGTCAAGACCATTCAGAAGCTCATCCAAGTAGTGATTTATCTAACCAGTGGTTAAAAAGAGCTGAAAGAATAGAAGACGTCAGCAATCCTACTACTGGAGATGGGAGTGCAGGCATATATGATGGTTTTAGTGAAACACAAACTGAGTCTCAGGTTGTGGGTTATGAAGAGGATTTGTCGGGAAGGCAAATGCTCATAGACAGAGTTCGAACCCGGAGTAGCATGACTTAA 2922 42.2 MLKSKPFAGANVFVSRNLVAPEIFDALHDALKQNGAQVFLCCDPSRNGPNDYHVISSADHEKFEDLRAKRCTLLGPQCVLSCAKEYRPLPQQGFTCCLALDGVKILASGFQADEKVEIEKLVTAMGGILHSKASLDVTFVIVKNVLAAKYKWALNISKKPIVTIAWLQQCWIEHRVVPQEGYRVLPFSGLNISVSRIPADERKEIEKLILLNGGRYSADLTRKCTHLICIISFSPEGDKYKVARTWGHINIVARKWFDQSIARRACLNEESYPVGCVSGTSNKMARGCLTAHNSQEKVIGNLQAAPSSFIADSAVSGPGFSDMDLEATLSQSTSMFSDSSHFIKEVVVEVPVTMPKDEASTDNCFANDFQSEDNDLYLSACRIKVVGFEASEMRKIVNMIRSGGGSRYMLFNDKLTHIIVGNPSEMEKKEVRDIAASGVIHVVRTTWLEDCDRQKKEIPVLSRHIAYDELIPKGFISSSKTSSIVMDQNKVSNVHPIMPSNELEGNIHVRTGKTSMIEEKIQEKSEANMSGDRTIKLSQKSQPSVANGRNRSQEKMQRDFMDTNGKSSCVFKGKLFWFSSSFPEDRRAEIVEWINQGGGEVVEDNMKQKVHFTVESHGEAPRSADVHTTCVSSHWVRSCLEDGCLRDTNGHILYSPLPCCVPLPGFKNIRFCVSQYEDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFSDGPKYEAACKWGIHSITAEWIYECVRQSKIVSLDLYRPKEVTAQDREAGLCTVSQFPTQAVQMIAGESQSQFPIRSAILRDRSAGTNSSSMGEVEKLSFSNKRLKYLDEAIQKPPLFVGNSLTPFDCNLNATRQTTSKSSVVTSRVPDVASAIEDLLEQTTKIHDQKSPGKTGCDKGIFPPHCSVIGQDHSEAHPSSDLSNQWLKRAERIEDVSNPTTGDGSAGIYDGFSETQTESQVVGYEEDLSGRQMLIDRVRTRSSMT 973
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81089520 81098633 + Hsped.01g15890.1 Hepe01g1589 560699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1589 973 FunFam Transcription coactivator 355 465 - -
Hepe01g1589 973 SUPERFAMILY BRCT domain 186 275 IPR036420 -
Hepe01g1589 973 ProSiteProfiles BRCT domain profile. 100 184 IPR001357 -
Hepe01g1589 973 Gene3D BRCT domain 563 659 IPR036420 -
Hepe01g1589 973 ProSiteProfiles BRCT domain profile. 182 274 IPR001357 -
Hepe01g1589 973 SUPERFAMILY BRCT domain 570 655 IPR036420 -
Hepe01g1589 973 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 23 803 - GO:0006270(PANTHER)|GO:0007095(PANTHER)|GO:0033314(PANTHER)
Hepe01g1589 973 Pfam twin BRCT domain 103 166 IPR001357 -
Hepe01g1589 973 Pfam twin BRCT domain 190 256 IPR001357 -
Hepe01g1589 973 Pfam twin BRCT domain 670 731 IPR001357 -
Hepe01g1589 973 CDD BRCT 103 170 - -
Hepe01g1589 973 FunFam DNA topoisomerase II binding protein 1 187 282 - -
Hepe01g1589 973 SUPERFAMILY BRCT domain 629 750 IPR036420 -
Hepe01g1589 973 ProSiteProfiles BRCT domain profile. 566 653 IPR001357 -
Hepe01g1589 973 FunFam Transcription coactivator 97 185 - -
Hepe01g1589 973 ProSiteProfiles BRCT domain profile. 666 749 IPR001357 -
Hepe01g1589 973 MobiDBLite consensus disorder prediction 524 556 - -
Hepe01g1589 973 CDD BRCT_TopBP1_rpt3 372 456 - -
Hepe01g1589 973 FunFam Transcription coactivator 563 659 - -
Hepe01g1589 973 Gene3D BRCT domain 664 756 IPR036420 -
Hepe01g1589 973 SUPERFAMILY BRCT domain 57 184 IPR036420 -
Hepe01g1589 973 Gene3D BRCT domain 185 276 IPR036420 -
Hepe01g1589 973 CDD BRCT_TopBP1_rpt2_like 186 264 - -
Hepe01g1589 973 SMART BRCT_7 663 739 IPR001357 -
Hepe01g1589 973 SMART BRCT_7 568 643 IPR001357 -
Hepe01g1589 973 SMART BRCT_7 4 86 IPR001357 -
Hepe01g1589 973 SMART BRCT_7 184 264 IPR001357 -
Hepe01g1589 973 SMART BRCT_7 97 174 IPR001357 -
Hepe01g1589 973 SMART BRCT_7 375 455 IPR001357 -
Hepe01g1589 973 ProSiteProfiles BRCT domain profile. 373 465 IPR001357 -
Hepe01g1589 973 Gene3D BRCT domain 358 462 IPR036420 -
Hepe01g1589 973 CDD BRCT_TopBP1_rpt2_like 664 739 - -
Hepe01g1589 973 Pfam BRCA1 C Terminus (BRCT) domain 378 451 IPR001357 -
Hepe01g1589 973 MobiDBLite consensus disorder prediction 531 551 - -
Hepe01g1589 973 Gene3D BRCT domain 32 94 IPR036420 -
Hepe01g1589 973 Gene3D BRCT domain 97 184 IPR036420 -
Hepe01g1589 973 SUPERFAMILY BRCT domain 375 459 IPR036420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1589 K10728 - csv:101212525 1561.58