Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1598 ATGGCCCAAACGACGCCGAATCACACGCAGACAGTCTCCGGTTGGGCAGCTCATGATTCCTCCGGCAAGATCACTCCATATACTTTCAAACGCAGAGAAAACGGCCCCGACGATGTGACCATAGAGATTTTGTACTGTGGAATATGCCATACGGATCTTCACTATGCCAAAAACGACTGGGGCATCACTATGTATCCTGTAGTTCCTGGGCATGAGATGACAGGGTTGATCACTAAAGTGGGAAGCAACGTGAAGAAGTTCAAAATAGGGGACAGAGCGGGAGTTGGGTGTATAGGCGCTACGTGTTTGGACTGTGAGTTCTGCCAAGATTCCCAAGAGAATTACTGTGATAAAATGCAGTTTTCATACAACGGAATCTTCTGGGATGGAAGCATAACTTACGGCGGATACTCCAAAATGTTTGTTTCAGATCATAGGTACGTGGTGCGCATACCGGAGAGCCTGCCAATGGACGCGGCGGCGCCGCTGCTGTGTGCTGGGATTACAGTGTTTACGCCGATGAAAGACCTTAATCTGATTGACTCGCCGAAGAAGAAGATCGGAGTGGTGGGGCTTGGAGGGCTTGGCCACATAGCAGTCAAATTTGCAAAGGCGTTTGGCCACCATGTCACTGTCATTAGCACCTCTGCTTCCAAGGAACAAGAGGCTAAACAGCGCCTTGGCGCTGATGAGTTCATAGTCAGTAAAGATCCTCAGCAAATGCAGAGTTACAAGAGGACATTGGATTTTATATTGGACACAGTGTCAGCACAGCATTGTCTTGGAGCAATCTTGGAACTACTGAAAGTAAATGGGACATTATCCATTGTGGGAGCTCCAGACAAGCCCATTCAATTGCCCTCTTTCCCTCTAATATTTGGGAAGAGGACAGTGAGAGGAAGCATAATTGGTGGAATACAAGAGACCCAAGAGATGATGGACTTATGTGGAAAGTATAATATCACTAGTGATATCGAGGTCATCAAACCTGATTACATCAACCAAGCTATGGAACGCCTCAGCAAAAATGATGTTCGATATCGATTTGTTATTGACATTGCCGATAACAAAGCTAAATATTAA 1083 46.17 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGPDDVTIEILYCGICHTDLHYAKNDWGITMYPVVPGHEMTGLITKVGSNVKKFKIGDRAGVGCIGATCLDCEFCQDSQENYCDKMQFSYNGIFWDGSITYGGYSKMFVSDHRYVVRIPESLPMDAAAPLLCAGITVFTPMKDLNLIDSPKKKIGVVGLGGLGHIAVKFAKAFGHHVTVISTSASKEQEAKQRLGADEFIVSKDPQQMQSYKRTLDFILDTVSAQHCLGAILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVRGSIIGGIQETQEMMDLCGKYNITSDIEVIKPDYINQAMERLSKNDVRYRFVIDIADNKAKY 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81270372 81272759 - Hsped.01g15980.1 Hepe01g1598 560708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1598 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Hepe01g1598 360 PANTHER ALDEHYDE REDUCTASE 7 354 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Hepe01g1598 360 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Hepe01g1598 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Hepe01g1598 360 Gene3D - 166 323 - -
Hepe01g1598 360 Pfam Alcohol dehydrogenase GroES-like domain 35 153 IPR013154 -
Hepe01g1598 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Hepe01g1598 360 FunFam probable cinnamyl alcohol dehydrogenase 15 178 - -
Hepe01g1598 360 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Hepe01g1598 360 Gene3D - 15 353 - -
Hepe01g1598 360 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Hepe01g1598 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491(InterPro)
Hepe01g1598 360 SUPERFAMILY GroES-like 17 179 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1598 Hepe-Chr1:81270372 Hepe04g1386 Hepe-Chr4:69519309 3.44e-150 dispersed
Hepe01g1598 Hepe-Chr1:81270372 HepeContig67g0004 Hepe-ChrContig67:510515 6.48e-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1598 K00083 - csv:101213170 660.218