Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1601 ATGAGCAATTTTTTTGGAATATTTACAGCAATCCAAACGAATAACTTGGGATCGCCGATGACTTTGGATACGGGATCGGTAGCGACACCTTATGATTATGGGGCAGGAGAAATATCAACCACTGGAGCATTACAACCAGGATTAGTCTATGAAACTAGTACAACAGACTACTTAAACTACCTTTGCTACCGAGGTTATAACCTGTCCATCATTAAGAGCATCTCAAATACTGTTCCTGAAGGGTTTGATTGCCCCAAGAATTCAACTGCAGACTACATATCCAACATGAACTACCCAACAATAGCAGTGTCCGAATTGACAGGCAAGGAAAGCAAGAAAATAAGCAGAACAGTTACAAATGTTGGTGGCGATGGCGAAACAGTTTACACAGTTAGTGTGGAAGCACCTGGGGAAGTAGATGTCAAAGTGATTCCAGAGAAATTGGAATTTACAAAGAACAATCAGAAGCAGAGTTACCAAGTGGTGTTCACTTCAACTGTAGCCACACTGAAGAAAGAAGTCTTTGGATCAATAACTTGGACTAATGGAAAATATCGAGTCCGGAGTTTATTTGTTGTAACTAGTAAGAGTAGTAAGCTAGAAGATTACCTATAA 615 39.84 MSNFFGIFTAIQTNNLGSPMTLDTGSVATPYDYGAGEISTTGALQPGLVYETSTTDYLNYLCYRGYNLSIIKSISNTVPEGFDCPKNSTADYISNMNYPTIAVSELTGKESKKISRTVTNVGGDGETVYTVSVEAPGEVDVKVIPEKLEFTKNNQKQSYQVVFTSTVATLKKEVFGSITWTNGKYRVRSLFVVTSKSSKLEDYL 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81294671 81295285 + Hsped.01g16010.1 Hepe01g1601 560711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1601 204 Gene3D - 61 196 - -
Hepe01g1601 204 Gene3D Peptidase S8/S53 domain 22 57 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe01g1601 204 Pfam Fibronectin type-III domain 95 193 IPR041469 -
Hepe01g1601 204 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 189 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1601 Hepe-Chr1:81294671 Hepe08g0286 Hepe-Chr8:2588624 4.40e-30 dispersed
Hepe01g1601 Hepe-Chr1:81294671 Hepe06g0715 Hepe-Chr6:52371135 2.95e-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1601 K25898 - csv:101213415 320.857