Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1605 ATGAGGAAGAAATCGCTCAATCCTGTTGTTTCCCATTTGTTCATCTTCGTTTTACTTCTTTTCTCTGTCTCTTTTTGCTTCGCCAATCGCGATATGGAAGCGCTGTTGAAGATGAAGACCGCCATGATTGCACCGGGGAGGTCGGGGCTTACTGATTGGGAGCCGTCGTCGTCGCCGTCTGCTCACTGCGATTTCTCTGGTGTTTCTTGCGATGGCGATTATAGAGTTGTGGCTCTTGACGTTTCCAATTTCCGTTTATCCGGCCGGATTCCGCCGGAGATTGGAATGTTGGAGAAGATTGTGAACTTGACGTTAGTGAATGACAATCTCACTGGAGAGCTTCCTCTCGAAATGGCGAAACTCACGTCGCTTAAGACTGTTAACCTCTCTAATAACGCATTCGGTGATGATCTGCGGGCGGAAATTATGCTCGGAATGACGGAACTCGAGGCTTTTGATATATATAACAATAATTTCTCCGGTCTGCTTCCGGTGGCGTTTGTTAAACTGGAGAAGCTTAAGCATCTTGACCTCGGCGGATGCTACTTCACCGGACAGATTCCGGCGGTTTACTCGGAGATGCAGACGTTGGAGTTCTTGAGCGTGCGGGGAAATGCGCTTTCCGGAAGGATTCCGACGAGTTTGGCGCGGTTGAAGAATCTCAAGTATCTTTACGCCGGATATTTTAATCATTACGACGGCGGAATACCGGCGGAGTTTGGATCGTTGAGTTCTCTCGAGCTTCTCGATTTTGCCAACTGTAATCTCTCCGGGGAAATTCCTCCGAGTTTGGGGGACTTGAAGCATCTGCACAGTCTATTTCTACAAGTAAACAATCTCACCGGTCGGATTCCCTCTGAACTCTCCGGTCTGATTAGCCTAAAATCACTCGACCTCTCGCTGAATGAACTCACCGGAGAGATACCGGCGAGTTTCGTAGCACTGCAGAACCTTACGCTGATCAATTTGTTCAGCAACAAACTTCACGGTCCGATTCCTGGTTTCGTCGGCGATTTTCCAAATCTCGAAGTGCTTCAGTTATGGAGTAACAACTTCACGCTCGAGCTCCCCGAGAATCTCGGCCGTAACGGAAAGTTGTTTCTGCTCGACGTGGCCACAAATCATCTAACTGGGCTTATTCCTCCGGACTTATGTAATAATGGTGGGTTGAAGACTTTGATTCTGTTGGATAATTACTTCTTTGGGCCCATCCCCGAGAAATTAGGCCTCTGTGATTCGCTTACGAAAATAAGAATTGCGGGAAATTTCTTCAATGGAACGGTTCCGGCTGGGTTCTTCAACTTTCCGGCGTTGGAGCTACTCGATATCAGTAATAATTACTTCTCCGGCGCCCTTCCGTCGCGAATGTCAGGTGAGTTTCTTGGAAGTGTACAGCTCAGTAACAACCATATCACCGGGGAAATCCCGGCGGCCATTAAGAATTTAGGAAACTTGCAGGTGCTTTCCTTGGAACATAACCAATTCACCGGGGATTTGCCTGTGGAAATATTTGAATTCGATAAGTTGCTGAGGATCAATATCAGCTTTAACAACATTAGCGGCGGAATTCCGCAGTCGATCGTTCAGTGCACATCTTTAACGTCGATTGATCTCAGTGAAAACTACCTCGATGGTCAAATTCCCAGAGGAATTTCGAAACTGAAAATCTTGAGCGTCCTGAATCTGTCAAGAAATCAACTGACAGGGCAAATTCCGAACGAGATTCGATCGATGATGAGTCTTACAACTCTGGATCTGTCATACAACAATTTCTTTGGTAAAATCCCGACCGGCGGTCAGTTTTCGGTGTTCAACGGCAGCGCATTCGCCGGAAACCCTAACCTCTGCTTCCCCAACTACGGACCTTGCGAATCTCTACACAAAAATTTCAAATCCATCAAGCTAATCATCTTAATCGTAGCGATATCCACCGTTCTGTTATGCGTACTCATCGGAGTTTACATCAGGAAGAGAAAGAGGATCCAGAAATCGAAGGCATGGAAACTCACAGCATTCCAACGCCTGAATTTCAAAGCGGAGGACGTCCTGGAATGTTTAAAGGAGGAAAACATAGTCGGCAAAGGCGGCGCCGGCGTGGTGTACCGTGGATCTATGCCGGACGGCTCCGTCATAGCAATCAAACTATTGTTAGGAAGTGGGCGGAACGACCACGGTTTCTCAGCCGAAATCCAGACGCTAGGGCGAATCAAGCACCGGAATATCGTCAGGCTTTTGGGGTTCGTGTCGAACAGAGACACGAATCTGCTGCTGTACGAGTACATGCCGAACGGGAGCCTGGACCAGAGGCTGCATGGAGTGAAGGGCGGGCATTTGCATTGGGATTTGAGGTACAAGATCGCCATGGAAGCCGCCAAGGGTCTCTGTTACTTGCACCATGATTGTACGCCGCTGATCCTTCACAGAGACGTGAAGTCCAATAATATACTGCTGGATAAATTGTTTGAGGCGCATGTCTCTGACTTTGGGCTCGCTAAGTTCTTGCACAGCGGCGGCGCCTCCGAGTGTATGTCCTCCATTGCCGGCTCCTATGGCTACATCGCTCCAGAATACGCGTACACACTGAGAGTTGACGAGAAGAGTGACGTGTACAGTTTCGGTGTGGTACTCCTAGAGCTGATAGCAGGTAGGAAGCCAGTTGGCGATTTTGGAGAAGGCGTGGACATAGTGAGGTGGATCCTTAAAACCACGTCAGAACTCTCTCAACCATCGGATGCAGCGACAGTATTAGCCGTGGTGGACTCGCGGCTGACCGAATACCCTCTCCAAGGAGTCATCCATCTCTTCAAAATAGCCATGATGTGCGTTGAAGAAGACAGCTCTGCAAGGCCAACCATGAGAGAAGTCGTCCACATGCTATCAAATCCCCCAAGGTCCGCCCCTACTCTAATCAACCTCTAA 2919 48.65 MRKKSLNPVVSHLFIFVLLLFSVSFCFANRDMEALLKMKTAMIAPGRSGLTDWEPSSSPSAHCDFSGVSCDGDYRVVALDVSNFRLSGRIPPEIGMLEKIVNLTLVNDNLTGELPLEMAKLTSLKTVNLSNNAFGDDLRAEIMLGMTELEAFDIYNNNFSGLLPVAFVKLEKLKHLDLGGCYFTGQIPAVYSEMQTLEFLSVRGNALSGRIPTSLARLKNLKYLYAGYFNHYDGGIPAEFGSLSSLELLDFANCNLSGEIPPSLGDLKHLHSLFLQVNNLTGRIPSELSGLISLKSLDLSLNELTGEIPASFVALQNLTLINLFSNKLHGPIPGFVGDFPNLEVLQLWSNNFTLELPENLGRNGKLFLLDVATNHLTGLIPPDLCNNGGLKTLILLDNYFFGPIPEKLGLCDSLTKIRIAGNFFNGTVPAGFFNFPALELLDISNNYFSGALPSRMSGEFLGSVQLSNNHITGEIPAAIKNLGNLQVLSLEHNQFTGDLPVEIFEFDKLLRINISFNNISGGIPQSIVQCTSLTSIDLSENYLDGQIPRGISKLKILSVLNLSRNQLTGQIPNEIRSMMSLTTLDLSYNNFFGKIPTGGQFSVFNGSAFAGNPNLCFPNYGPCESLHKNFKSIKLIILIVAISTVLLCVLIGVYIRKRKRIQKSKAWKLTAFQRLNFKAEDVLECLKEENIVGKGGAGVVYRGSMPDGSVIAIKLLLGSGRNDHGFSAEIQTLGRIKHRNIVRLLGFVSNRDTNLLLYEYMPNGSLDQRLHGVKGGHLHWDLRYKIAMEAAKGLCYLHHDCTPLILHRDVKSNNILLDKLFEAHVSDFGLAKFLHSGGASECMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELIAGRKPVGDFGEGVDIVRWILKTTSELSQPSDAATVLAVVDSRLTEYPLQGVIHLFKIAMMCVEEDSSARPTMREVVHMLSNPPRSAPTLINL 972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81332934 81338202 + Hsped.01g16050.1 Hepe01g1605 560715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1605 972 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 17 960 IPR050647 -
Hepe01g1605 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1605 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 231 335 - -
Hepe01g1605 972 Gene3D Ribonuclease Inhibitor 142 229 IPR032675 -
Hepe01g1605 972 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Hepe01g1605 972 Gene3D Ribonuclease Inhibitor 230 334 IPR032675 -
Hepe01g1605 972 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Hepe01g1605 972 FunFam LRR receptor-like serine/threonine-protein kinase EFR 336 628 - -
Hepe01g1605 972 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515(InterPro)
Hepe01g1605 972 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515(InterPro)
Hepe01g1605 972 Gene3D Transferase(Phosphotransferase) domain 1 761 966 - -
Hepe01g1605 972 Gene3D Phosphorylase Kinase; domain 1 650 760 - -
Hepe01g1605 972 SUPERFAMILY Protein kinase-like (PK-like) 677 959 IPR011009 -
Hepe01g1605 972 Pfam Leucine Rich Repeat 463 482 IPR001611 GO:0005515(InterPro)
Hepe01g1605 972 Pfam Leucine Rich Repeat 484 503 IPR001611 GO:0005515(InterPro)
Hepe01g1605 972 Pfam Leucine Rich Repeat 293 313 IPR001611 GO:0005515(InterPro)
Hepe01g1605 972 Pfam Leucine Rich Repeat 245 267 IPR001611 GO:0005515(InterPro)
Hepe01g1605 972 SMART serkin_6 686 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1605 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 655 760 - -
Hepe01g1605 972 Gene3D Ribonuclease Inhibitor 335 631 IPR032675 -
Hepe01g1605 972 SUPERFAMILY L domain-like 333 627 - -
Hepe01g1605 972 SMART LRR_typ_2 146 169 IPR003591 -
Hepe01g1605 972 SMART LRR_typ_2 339 363 IPR003591 -
Hepe01g1605 972 SMART LRR_typ_2 554 578 IPR003591 -
Hepe01g1605 972 SMART LRR_typ_2 482 506 IPR003591 -
Hepe01g1605 972 SMART LRR_typ_2 291 315 IPR003591 -
Hepe01g1605 972 SMART LRR_typ_2 243 267 IPR003591 -
Hepe01g1605 972 SMART LRR_typ_2 121 145 IPR003591 -
Hepe01g1605 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 761 970 - -
Hepe01g1605 972 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 143 230 - -
Hepe01g1605 972 ProSiteProfiles Protein kinase domain profile. 686 969 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1605 972 SUPERFAMILY RNI-like 79 422 - -
Hepe01g1605 972 Pfam Protein kinase domain 688 957 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1605 Hepe-Chr1:81332934 Hepe07g0583 Hepe-Chr7:6307627 2.72e-147 dispersed
Hepe01g1605 Hepe-Chr1:81332934 Hepe04g1362 Hepe-Chr4:69258205 3.79e-148 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72480 PF00069 Pkinase 1.50E-41 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1605 - - - 0.0