Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1607 ATGGATACCCAAATTTCATTCTTATTATATCTCCTAACCATTCTAATTTCATTATCTGGAGTATTATCCACCACTTTCAGCTTCGTTAATCAATGTGATTACACTGTTTGGCCGGGAATTCTCACAAACGCCGGAGTTCCACCACTTCCGACCACCGGTTTCGTCCTCGCTTCCGGCGAGTCTAAACCAATCTCCGCTCCGGCATCTTGGGGCGGCCGGTTCTGGGGCCGGACCCACTGCTCCCAAGATTCCACCGGAAAATTCTCCTGCCTCACCGCCGACTGCGGCTCCGACAAGATAGAGTGCAACGGAAACGGCGCGAAGCCGCCGGCAACTCTGGCGGAGTTCACCCTCGACGGCGCCGGCGGGCTGGACTTCTTCGACGTGAGTTTGGTCGACGGTTACAACATCCCTATGCTGGTGGTCCCACAAGGCGGCACCGGCGACAAATGCTTGAGCACGGGTTGCGTGGTGGACTTGAACGGCGCGTGTCCTTCAGAGCTCAAGGTTACGAGCGTGGACGGCGGAGAAAGCGTCGCGTGTAAAAGCGCGTGTGAAGCGTTTAATCAACCCGAGTTTTGTTGCAGTGGCGCGTACGCGACTCCCGATACTTGCAAACCCTCTCAGTACTCGCAGGCTTTCAAAAGCGCGTGCCCACGCGCTTACAGCTACGCTTACGACGATTTAACCAGCACGTTTACATGTGCCGACGCCGATTATATCATTACATTCTGCCCTTCACCCAACACAAGTCAGAAATCAACGGACAATCACAACACGGAAGGCCACGGCACAAACACGCCGTCGATCAACGGCGGCAACGGCACAATGGTTTACCAAGGGGCTGAGTTTGATCTAAGCGGCGCGTCGAGAACAACGCTCCGCCGTATTCTCGGTGTAGTTGTTGCGACAGTGGCAACTCTTCAATTTCGGCAACTCTTTTGA 945 54.5 MDTQISFLLYLLTILISLSGVLSTTFSFVNQCDYTVWPGILTNAGVPPLPTTGFVLASGESKPISAPASWGGRFWGRTHCSQDSTGKFSCLTADCGSDKIECNGNGAKPPATLAEFTLDGAGGLDFFDVSLVDGYNIPMLVVPQGGTGDKCLSTGCVVDLNGACPSELKVTSVDGGESVACKSACEAFNQPEFCCSGAYATPDTCKPSQYSQAFKSACPRAYSYAYDDLTSTFTCADADYIITFCPSPNTSQKSTDNHNTEGHGTNTPSINGGNGTMVYQGAEFDLSGASRTTLRRILGVVVATVATLQFRQLF 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81348554 81350103 - Hsped.01g16070.1 Hepe01g1607 560717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1607 314 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Hepe01g1607 314 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Hepe01g1607 314 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Hepe01g1607 314 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Hepe01g1607 314 Gene3D Thaumatin 24 246 IPR037176 -
Hepe01g1607 314 SMART tha2 26 246 IPR001938 -
Hepe01g1607 314 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Hepe01g1607 314 PIRSF PR5 1 284 IPR001938 -
Hepe01g1607 314 PANTHER OS03G0233200 PROTEIN 10 246 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
Hepe01g1607 314 Pfam Thaumatin family 30 246 IPR001938 -
Hepe01g1607 314 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Hepe01g1607 314 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Hepe01g1607 314 CDD TLP-PA 25 245 - -
Hepe01g1607 314 MobiDBLite consensus disorder prediction 250 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1607 Hepe-Chr1:81348554 Hepe08g0278 Hepe-Chr8:2518500 1.32e-115 dispersed
Hepe01g1607 Hepe-Chr1:81348554 Hepe10g0160 Hepe-Chr10:1635964 2.30e-152 wgd
Hepe01g1607 Hepe-Chr1:81348554 Hepe04g1597 Hepe-Chr4:71470404 1.96e-105 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1607 - - - 0.0