Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1619 ATGGCTCTCTTAACTTCCTTGGCAGAGCCCTCTGAGCAAAAGAAACCCCTCACTAACAAACGCAGAAAAAAACACCAAAACCCAACGCCGCCGCCGCCGTCCTCCGCCCAATCCTCGTGGTACCAAATCAAGAACCTCATCACCTGCAAACAGGTTGAGGCTTCGAGAGTTCACGAGCCGGCGAAACGGTCGTCGCCGGCGTATTCGAAGTTGGGGTCTTCTTGCAGCTCCATTTGTAGTTTCAGAGACGTGGTCCATGGCAATGCTAAAGTTGTTCATAGAGCCGACAACTCACCGGAAAGCAGCTCCGTCGGCCAGGAATCTAGGTTACTTACTAGAAAACCTCTTAACGGCTCGTCGTCTCGTTCTTTAATGGCGACGGCGCCGGCGCCGGCGAGAACCAAAAATCCTGCTTCATACTCCTCGTCTTCTAGAGGAATACAATTACGAAAGCTTTCTGGCTGTTATGAATGCCACACCATCGTTGACCCTACCAGGTACCCAATTCCAAGGAGTTCCATATGTCCTTGTCCTCAGTGTGGAGAGGTCTTCCCCAAAATTGAAAGCTTAGAGCTTCACCAAGCACTTCGCCATGCTGTATCGGAGTTGGGTCCTGACGATTCGGGTCGAAACATCGTGGAGATTATTTTCAAATCCAGCTGGCTAAAAAAGGACCGCCCGATTTGCAAGATCGAACGGATATTAAAGGTCCACAATACCCCACGCACGATCCAACGGTTCGAGGACTGCCGTGAAGCAGTGAAGACACGTGCGCTCGGCAGCACCAGAAAAAACCCGCGGTGTGCGGCTGACGGCAATGAGCTGTTGCGGTTCCATTGCAGCGCTTTGTGGTGCGACCTCGGCTCACGTGGCTCCACCGGCTTGTGCGGCTCGATTCCCGGCTGCGGCGTGTGTAGAGTCATCCGCCACGGATTCCAGTGCAAGCCCGCTGGGCCCGCTGGTGTACGGACCACCGCCAGTAGTGGTAGGGCCCACGATTCGTTCGACTGCGGCGACGGGAAACGGCGGGCGATGTTGGTGTGCCGTGTCATCGCCGGAAGGGTGAAGCGGATCGCGGAGGATGCGGCGGTGGCGGAGGAAGAGAATGTGTCGGCGGTGGCAGCCTCTTACGACTCTATTTCTCGACACGCTGGGATGTACTCGAACCTCGAGGAGCTGATCATTTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTCGTCATCTATGAAGCACTCCAAACCTAA 1245 54.7 MALLTSLAEPSEQKKPLTNKRRKKHQNPTPPPPSSAQSSWYQIKNLITCKQVEASRVHEPAKRSSPAYSKLGSSCSSICSFRDVVHGNAKVVHRADNSPESSSVGQESRLLTRKPLNGSSSRSLMATAPAPARTKNPASYSSSSRGIQLRKLSGCYECHTIVDPTRYPIPRSSICPCPQCGEVFPKIESLELHQALRHAVSELGPDDSGRNIVEIIFKSSWLKKDRPICKIERILKVHNTPRTIQRFEDCREAVKTRALGSTRKNPRCAADGNELLRFHCSALWCDLGSRGSTGLCGSIPGCGVCRVIRHGFQCKPAGPAGVRTTASSGRAHDSFDCGDGKRRAMLVCRVIAGRVKRIAEDAAVAEEENVSAVAASYDSISRHAGMYSNLEELIIFNPKAILPCFVVIYEALQT 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 81436104 81438972 - Hsped.01g16190.1 Hepe01g1619 560729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1619 414 MobiDBLite consensus disorder prediction 95 127 - -
Hepe01g1619 414 Gene3D - 199 411 - -
Hepe01g1619 414 ProSiteProfiles Zinc finger C2H2 type domain profile. 175 203 IPR013087 -
Hepe01g1619 414 SUPERFAMILY ADP-ribosylation 200 410 - -
Hepe01g1619 414 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 38 409 - -
Hepe01g1619 414 MobiDBLite consensus disorder prediction 92 145 - -
Hepe01g1619 414 ProSitePatterns Zinc finger C2H2 type domain signature. 175 198 IPR013087 -
Hepe01g1619 414 MobiDBLite consensus disorder prediction 54 74 - -
Hepe01g1619 414 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1619 Hepe-Chr1:81436104 Hepe02g2313 Hepe-Chr2:67059264 4.95e-106 dispersed
Hepe01g1619 Hepe-Chr1:81436104 Hepe07g1110 Hepe-Chr7:19100442 2.86e-61 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54844 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1619 - - - 0.0