Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1712 ATGTTCTCAAAAGCCTTCACGTTTAGTAACGACATTCGTAACTTGGCTTCTGAAATGTTCCCCGGCCAAGTCGAAGCCGCTTTGAAGGAGCCTCCCGGTGCCAAAGCGCCGCCGGATAAGGTTCTCGTCGCCGTCAAGGCTGAGAGATTGATTTCCAAATCTGCTCTGGCTTGGGCTCTTACTCATGTCGTTCGTCCTGGTGACTGTATAACCTTACTCGCCGTCTTCTCCGTCGAGAAAACTGGAAGAAGATTCTGGAATTTTCACAGATGGAGCGGGGATTGTGCGAATGGTGTTCAGGAGAATCTGCCGGATCGGGTACATGAGATCTCCGAGTCTTGTTCTCAGATGGTGCTTCGTTTCCACAATCAAGTTGAGGTTCAAGTGAGGATTAAAGTGGTCACAGGAACACAAGGAGGAGCTGTCGCTGCTGAAGCTAAGTTAAAAGGAGTTAACTGGGTCGTACTAGACAGGAAATTGAAGAATGAGGTGAAGAGTTGCCTGGAAGAATTAAGTTGCAATATTGCTACAGTCAAAGGGTCTATACCAAAAGTTCTCAGGCTTAATTTGGAGTGCTGGAGTGAACCTCAAACTCCTTTCTTTTCAGCTAATTCTTCTCCTGTTCGAAAAGGTCAACAAAATAGGATGAAGCAGACAACTCCTCTACCAAGCAGACCCGAAGAAGAACCTGGTGCCTCATTCAGAAAATCCTCAAAAGAAGGATCAAAATTGGGTACTGATGCAGTGTCTTCTATTTTCCTTGTATATGAGCAAAACCCTCTATATGAAGGAAACTTAAAAAGAAATCACTTGCCAATTAATGAGAATAACGATTTAAGCATTTCAGTATCTTCATCCAACTCGATGGAAGAAAAAGTTCTCTCTCTACCTCCAACATCTGTGGCTTCAAATCAAAAATGTGTCTATTGGATTTCTCAGAACCATAACATTGCTGAAGGAAAAACTCTATCCAAGTCCAAAAGAAGATTCCTTAGATTTGCTTCAACTCCCAAGGTGCCATTCAGTAATCCTACAAGTCTTGAGAAGAGTACGACTTTCGAAGATATTAGGCTCAACCAGTCTGAGAGAAAAGACTACATTGTCGACTCGAATATCAGGGATGCTGTCTCTCTGGGTAGAGCATCCTCTGCACCCCCTCCTCTGTGCTCAATATGTCAACACAAGGCGCCGGCTTTTGGAAAACCTCCCAGACAGTTCTCTCTCAAAGAGCTCGAGGAAGCTACAGACAGATTTTCGGATATGAACTTCTTGGCAGAAGGCGGTTTCGGAATTGTTCATAGAGGAATCTTGAGAGATGGTCAGGTTGTAGCTGTGAAGCAGTTGAAATGTGGAGGCTTACAAGCAGATGCTGATTTTTGTAGGGAAGTTCGGGTGCTGAGTTGTGCACAACACAGAAATGTAGTGTTGCTGATTGGGTTTTGTATTGAGGACACAATGAGGTTATTGGTTTATGAGTACATATGCAATGGTTCATTGGATTTCCATTTACATGGAAATGGAAGCCAGTTAGATTGGCATTCAAGGCAAAAGATAGCAATAGGAGCAGCACGAGGTTTACGTTATCTTCACGAAGATTGCCGAGTCGGGTGTATAGTGCATAGAGATATGAGACCTCACAATATCCTCCTAACACATGATTTTGAACCCATGGTTGCTGATTTCGGGCTGGCGAGATGGCATAATAAATGGTCTACCAGTGTTGAGGAGCAAGTCATTGGAACTTCAGGGTATTTAGCACCAGAGTACATCAATGGCGGTATGGTATCACATAAAGTGGATGTATATGCATTTGGCATGGTTTTATTAGAGTTGATTAGTGGTAGAAGAAGCTGTGAGTTGCACCGTCTAGAGGGAAAACAATTCATATCAGAATGGTTCCACCCCATCTCTGCATTGCAAATTCAACATTTACTAGCAAGTAGTAATCATTTAGTAGATCCATGCTTGGCCTCTGAGCCATCCCCCGACTTCTGTTATCAACTGCATTCAATGGTCCGTGCCGCTTCCTTGTGTCTATGTCCAGATCCTGAATCAAGACCCTCAATGTCAAAGATTCTTCGAGTGCTAGAAGGAGGAGATCCAGTTGTTCCTCTCGGTTTAGATTTCGACCCGGTCGGCTGCAGAAGTGCACACTTGGATGGTCTGACGTCTCACAAACAAATTGAAGCAAGAAGAAGTCATACTCGTACACTCTCACAATAA 2223 43.81 MFSKAFTFSNDIRNLASEMFPGQVEAALKEPPGAKAPPDKVLVAVKAERLISKSALAWALTHVVRPGDCITLLAVFSVEKTGRRFWNFHRWSGDCANGVQENLPDRVHEISESCSQMVLRFHNQVEVQVRIKVVTGTQGGAVAAEAKLKGVNWVVLDRKLKNEVKSCLEELSCNIATVKGSIPKVLRLNLECWSEPQTPFFSANSSPVRKGQQNRMKQTTPLPSRPEEEPGASFRKSSKEGSKLGTDAVSSIFLVYEQNPLYEGNLKRNHLPINENNDLSISVSSSNSMEEKVLSLPPTSVASNQKCVYWISQNHNIAEGKTLSKSKRRFLRFASTPKVPFSNPTSLEKSTTFEDIRLNQSERKDYIVDSNIRDAVSLGRASSAPPPLCSICQHKAPAFGKPPRQFSLKELEEATDRFSDMNFLAEGGFGIVHRGILRDGQVVAVKQLKCGGLQADADFCREVRVLSCAQHRNVVLLIGFCIEDTMRLLVYEYICNGSLDFHLHGNGSQLDWHSRQKIAIGAARGLRYLHEDCRVGCIVHRDMRPHNILLTHDFEPMVADFGLARWHNKWSTSVEEQVIGTSGYLAPEYINGGMVSHKVDVYAFGMVLLELISGRRSCELHRLEGKQFISEWFHPISALQIQHLLASSNHLVDPCLASEPSPDFCYQLHSMVRAASLCLCPDPESRPSMSKILRVLEGGDPVVPLGLDFDPVGCRSAHLDGLTSHKQIEARRSHTRTLSQ 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82212479 82219446 - Hsped.01g17120.1 Hepe01g1712 560822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1712 740 MobiDBLite consensus disorder prediction 203 221 - -
Hepe01g1712 740 FunFam Os07g0541700 protein 494 581 - -
Hepe01g1712 740 Gene3D HUPs 39 179 IPR014729 -
Hepe01g1712 740 Pfam Protein kinase domain 422 694 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1712 740 Gene3D Transferase(Phosphotransferase) domain 1 494 701 - -
Hepe01g1712 740 SUPERFAMILY Protein kinase-like (PK-like) 400 696 IPR011009 -
Hepe01g1712 740 Gene3D Phosphorylase Kinase; domain 1 389 493 - -
Hepe01g1712 740 ProSiteProfiles Protein kinase domain profile. 418 703 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1712 740 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 390 493 - -
Hepe01g1712 740 PANTHER OS01G0750732 PROTEIN 316 697 IPR050885 -
Hepe01g1712 740 MobiDBLite consensus disorder prediction 203 243 - -
Hepe01g1712 740 ProSitePatterns Tyrosine protein kinases specific active-site signature. 538 550 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1712 Hepe-Chr1:82212479 Hepe02g1475 Hepe-Chr2:19156125 1.67e-190 dispersed
Hepe01g1712 Hepe-Chr1:82212479 Hepe08g1024 Hepe-Chr8:9837175 4.03e-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72482 PF00069 Pkinase 8.50E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1712 - - - 0.0