Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g1720 | ATGTTTCTGAGTTCCAACGCCCCTGTGATGAACACGTCATCTTCCTTGCCGGACCTCTCCTTGCAGATCAGCCTTCCGTCGTCCGCGCCGCCCAAGCCACGGACCTCAACAACCACCACGGATTCTGGTTGCAGTACTGCCAAAAGTGATTTGAGCAATGAAAATGGTCTCTTCCGCTTAGGGTTTGAAGTGGCAGATCATGTCGGTCTTCCTCCTCGACATCACCAAGCTCGTAATGTACTCCACGGTCGTCGCGACTTTAAAAGAAGCGGCGGCGGAGTCGGCTGTGGAGTAAGGAGAAGCGTTCGTGCTCCCAGAATGAGATGGACTACAACTCTACATGCTCATTTTATACATGCTGTTGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTCAAAAGCCATTTGCAGATGTACCGAACAGTGAAGAACACTGTGAAGGGAACAGATGATTGTGGAAGGCCTGAGGTTGAAGCAGAAGCTGTTTTATCTTCTTCTTCTTCGTCTGTTCATAAATCTAACTTTGAATCTCCTCATTGCCAGAGAATCCAAAGAAGTAGTTTGGTAACATCAATGCACAAGAATAACGAAATGGCCAAGTCAAACGGCGACGCTTTCGCTAAATCAAGAGGAATAAAGGTTGAAGGAACCAAGAGAGGTTATCACGAAGCTCTCAGCATGCAGCGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTATGCTGATGCACATGACCTTGCCCTTCTCAATTGCTAA | 822 | 46.59 | MFLSSNAPVMNTSSSLPDLSLQISLPSSAPPKPRTSTTTTDSGCSTAKSDLSNENGLFRLGFEVADHVGLPPRHHQARNVLHGRRDFKRSGGGVGCGVRRSVRAPRMRWTTTLHAHFIHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKGTDDCGRPEVEAEAVLSSSSSSVHKSNFESPHCQRIQRSSLVTSMHKNNEMAKSNGDAFAKSRGIKVEGTKRGYHEALSMQRINLEFTLGRPSWQLDYADAHDLALLNC | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 82393847 | 82396510 | - | Hsped.01g17200.1 | Hepe01g1720 | 560830 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g1720 | 273 | Gene3D | - | 104 | 161 | - | - | |
Hepe01g1720 | 273 | FunFam | Myb family transcription factor | 103 | 161 | - | - | |
Hepe01g1720 | 273 | SUPERFAMILY | Homeodomain-like | 102 | 159 | IPR009057 | - | |
Hepe01g1720 | 273 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Hepe01g1720 | 273 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 105 | 158 | IPR006447 | GO:0003677(InterPro) | |
Hepe01g1720 | 273 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 11 | 261 | IPR044847 | GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro) | |
Hepe01g1720 | 273 | Pfam | Myb-like DNA-binding domain | 106 | 157 | IPR001005 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1720 | Hepe-Chr1:82393847 | Hepe06g0993 | Hepe-Chr6:57694093 | 4.88e-33 | dispersed | |
Hepe01g1720 | Hepe-Chr1:82393847 | Hepe10g0690 | Hepe-Chr10:9119845 | 5.40e-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54853 | PF00249 | Myb_DNA-binding | 9.00E-06 | CL0123 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g1720 | - | - | - | 0.0 |