Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1742 ATGCTTGGTGCCTGGGCGAGAAGTCGATCTTCTCATCGATTGATTGATCTTCGTCGTTTCTCCTCGTCGTCTTCATCTTCTACTGCGCAGAAATCAATCGACGGCTCGAAAATTCTCCAGAATTCGCATCTAGTCTCACCTCCGCCTCCGATTTTGCGCCGCCCACCGAACAGTTTGTTGCCTAGTGCATCACCCGCTTCTTTTTCTCGCCGTTCGATTATAACCGTCTCCGCGGCTGTTATTTCTGCTTTAGTCACTTCCATTGCTCTTCTTTCCTCTGAAAATCAGTCTGATCTCCCCCAGGAGAGTTATAATACCTTGTATGATGGGATTGGAGGGGCAGCCCAGAGATCTAGCGATTCATTTAAGAAGATTTTTCATCACATCAAACAAACTGGCGTTGCCGCTTCGGTTCTCTGGCAGTCGTTAAGGTCTGTGATGTCATCGGCCAATCATGAGGTCCGGTCCGGCTTTGAACTTAGGGTTGCGGCATTGCTGGCTGACATTGCTGCAGCCAATGCCAGCCGTAGGGCGGCTATTGTCGGGGCTGGAGGCGGTGCTGTAGTGGATTGGTTGCTCGAGTCGGTGGCGGTACCTCGAGATGGATGTGGAACTCAGGCAGAGTCGGCCAGAGCGCTTGCCTACTTGATTTCTGACCCTGATGTGTCTGCTTCCGTCCTTGGTAGGCCTCGTGCAGTTCCAAATCTTTTGAGGTTCATCTTCTCGTGTCAGCCTCGGCGAACGAAGCAGCATCCAAGACGTAGTTCATTCGATATTTCTGATTCTTTGAAAGGTAGGAGCATGCTTGTGGCTGCCATCATGGATATTGTAACGTCCAATTGTGATAAGTCAGAGAAGCTAGCTTTTGAGCCATCCTTGCCTGCAAATGCTGAAACTAGAGATATTGCAGCAGCCATTCAAGTTATCGAGGAAGGTGGTTTTCAATTTGATGAACCAAATGGTGGTGAAGAGGAAAATGGTGGAAGAGGAATCAAAGGAATAGGAATTAAAATTCTTGGAGGCACTACTATTGTGGGACTTTCGAGAACAAGTGGGCTTGTGAAGTTGGCATATTCTGATGTTGGTCATGTAGAGCTGGTAAAAAATACACCTAAAAGTTTTGTTTCAGAAAAGCATGATAGCTCTCTTGTAGCCAATTCTTCTGTTGTTCCCGGTCTCTGGGATGATTTGCATTGTGAGCATGTTGCTGTACCTTTTGCAGCATGGGCGTTGGCAAATTGGTCAATGGCATCAGAACTGAACAGATTGCACATTCATGAACTAGATCAAGATGGACAAGCTGTCATGACTGCTTTAATGGCACCTGAAAGGTCGGTGAAATGGCATGGAAGTTTGGTAGCAAGGGTTTTACTAGAGGATCGTAATCTTCCCTTAAATGATTCTGTTTCTGATTGGAGCTCAAGCCTTCTTTCTACTGTTTCTCATGCAAGTAAAAATGATGACATTCCTTTGGCTCAGGCTGCTTTGTCTGCATTTTTGGCTTCTGTTGAACGGTTCCCTGGGGCACAAAAAAAGATAATGGAGAAGGGTCTGCATCTAATGAGAGATGCTGCTATGCGGACCCAAAAACATGGAGAGGTTCAAGAAGCTTTAGCAAAGGCATTAGAGTTACTCAGCACTGGGCGGATGCATCTATCAGCTGAAGAGAGTCAGAGATGGTCTGCTATACTGCTTCAATGGGTTTTTGGCAAATTTTCCTCTGAATCTTTGAGGGCTTCTGCAACTAAAATTTTATCTTGCATTCTTGATGACTATGGACCAAGCTCCATACCTATTTCTCAAGGATGGTTGGCTATACTGCTGATTGAAATACTGGATTCTACTAAGAAGCCTGCAGTTAATGGAGCTACTCAGCTTAAAAACGACAAAGTGAAGACTAAGATTGAGCAGTCAAACATTGTTTTTGCCAGTCAAGTTGCTAATCAGTTAGCGGGAGCAGTTGTTAACCTGGCAGTACACCAGTTTGGTGCAACTACTGATTCATTAGATACGTCTCCATTGGCAGATCTACTTTCACGTGAACCTTTTATAGCACCTTTAAAGAATATTAAAAAAGAGATTAGTCCAAAGTTTGATGCGGCTGATTCTGCAATGGCAACAATGAAGGGGATTAAAGCGCTGACTGAAGTTTGTGCAGATGATTCTTCATGTCAGAGCAGAATAGCTGATTTTGGTGTTCTCTTTTTGCTGAGACGCCTTTTGTTATGTGATGATTATGAGAAGCTGGCAGCAATGGAAGCATATGATGCATCTAGAGTTCTTGAGGCTCAAGAACGTGTTTCAAATGCCTCTGGGGAACCATCACTTTCAGAGAAGAAGAATGATTCATCTAGTGTCCGAGTACCCCCTACAGCTCACATCCGTAGACATGCTGCTCGGCTTTTAACCATCCTTTCACTTCTAGAGAAAGTCCAGAAGGAGATTCTTTCTGATGACGAATTTTGTAGATGGCTTGAGGACTGTGCCAATGGGGCCATTCCTGGTTGCAATGATGGTAAATTGCAAAGCTATGCTAGAGCCACACTGCTAAATATATTTTGTATTAACCGTAGAGCTTCTGAAAATGATTCTCCCTCTGAGCCTACAAACAGGAAGAAGAACTGCCCCCGTTACGATGATATGATTTTCTTAATAAATCCTGAGCTTCCTCACTGGAAGGTTCATGAAGAAGAGGAGCAGGACACTGTTCAAAAGGATGATGAATCTTCTCTTTCACTGGCTAATTTCATTGATATCGATGGTGTAGCTGTAGCAAGACATGTAAATGATAACAATGCCTCGTCTTCATCTGATTCTAGGCGGGACTCTCCTTTGGTAGATGTTGTTTTTATTCATGGCCTTCGAGGTGGACCTTACAAGTCATGGCGCATATCTGAGGACAAATCCTCCACAAAATCTGGACTGGTAGAGAAGATTGATCAGGAGGCAGGGAAACTAGGGACGTTTTGGCCAGGTGAATGGCTTTCATCTGACTTCCCAAGGGCTCGTATGTTTACCCTTAAATACAAGACAAATCTCACCCAGTGGTCTGGGGCTAGCCTTCCTCTTCAGGAAGTCAGCTCCATGCTACTGGATAAGCTTGTTGCTGCTGGAATTGGGGAACGACCTGTTGTATTTGTTACTCACAGCATGGGAGGGCTGGTTGTCAAGGAAATGCTGCACAAAGCCAAGACAGAAAATATCGATAACCTCGTGAAGAATACTGTGGGAGTTGTCTTCTATAGCTGCCCACATTTTGGCAGCAAACTAGCAGACATGCCTTGGCGAATGGGTCTCGTATTTCGCCCTGCCCCTACTATAGGAGAGCTGAGAAGTGGGTCGCCTAAATTGGTTGAGCTGAATGATTTTCTCCGCCACCTCCATAAGAAAGGACTGCTTGAGGTCCTTAGTTTCTGTGAGACGAAGGTGACCCCAATTGTTGAAGGTTATGGAGGATGGGCTTTCCGGATGGAAATTGTTCCCATTGAATCTGCATATCCTGGCTTTGGCGAACTAGTTGTGTTAGAGTCAACGGATCACATAAATTCGTGTAAGCCCCTAAGTCGCACTGACCCTTCATACACAGAGACATTAGAATTTTTGCAGAAGTTGAAAGCTCGCATTCCGGCGAAGGTAGATGATTGCAGAACAAAAATCGTCAGCCTGAACGTTCCTTCGCCGATGCCGGAGAGCGTAGCGCTGCATTCTCTTGAACGAATGTCTTCAACTCATGCTTCTATTTCTTGCTCCTTCTCCTTCCTAGGTTCTTCGAGACCCTTGATGATTTGTGCGAGTGTAAGGACTCGGAATATGAAGTTCAGAAATGGAGGTGCTCTGAGGTTGTGCTGCTCGGATTCAAATCATTCGGCTCCTTTGCCGTCCACGACTGCAACCAGCACGGGCCCTCCTCCTCCGGTTCTGAAGAGGAGGAATAGGTACAGGAAAGAGTATCCTGGAGAGAGCAAAGGCATTACTGAGGAGTTGAGGTTCGTCGCCATGAGGCTTCGTAATGTTAATGGTAAAAAGTTACCTAGTGATGCTGTGGATTCATCCAGCGAAGATGAAGTAGAGGAGGAAGATGACGGAAATTTGGTGTTGAGTGATAATGATAATGATGAGAACGAGGATACAGAGACTTGGCAACCGAGCTTGGAAGGATTCCTTAAATATTTGGTTGATAGTAAGCTCGTCTTCAGCACTGTGGAGCAAATCGTTGATGAATCCAGCGACGTTGCTTATAGTTACTTCAGAAAATCAGAGTTGGAACGTTCAGAATGTCTTGCCAAGGATCTAGAGTGGTTCAGCGAACAGGGTATTGAGATACCTGAGCCGAGCAATCCAGGAGTTTCTTATGCTAAGTATCTGGAGGAACTTTCTGAGAGGAGTGCCCCTCTGTTCCTTTGCCATTACTATAACATATACTTTTCACATATAGCAGGTGGGCAAGTGATAGCGAAACAGGTTTCTGAGAGACTTCTTGAAGGAAGAAAGCTCGAATTTTATACATGGGCAGGGGACGCAGAAGAATTGCTGAAAAATGTTCGTGAGAAGCTTAACATGCTTGGAGAGCACTGGTCTCGGGATGAGAAAAATAAATGCTTGAGAGAAGCAACCAAGTCATTCCGCTCTCTGGGACAGATAGTTCGTTTGATTATCTTATGA 4662 45.13 MLGAWARSRSSHRLIDLRRFSSSSSSSTAQKSIDGSKILQNSHLVSPPPPILRRPPNSLLPSASPASFSRRSIITVSAAVISALVTSIALLSSENQSDLPQESYNTLYDGIGGAAQRSSDSFKKIFHHIKQTGVAASVLWQSLRSVMSSANHEVRSGFELRVAALLADIAAANASRRAAIVGAGGGAVVDWLLESVAVPRDGCGTQAESARALAYLISDPDVSASVLGRPRAVPNLLRFIFSCQPRRTKQHPRRSSFDISDSLKGRSMLVAAIMDIVTSNCDKSEKLAFEPSLPANAETRDIAAAIQVIEEGGFQFDEPNGGEEENGGRGIKGIGIKILGGTTIVGLSRTSGLVKLAYSDVGHVELVKNTPKSFVSEKHDSSLVANSSVVPGLWDDLHCEHVAVPFAAWALANWSMASELNRLHIHELDQDGQAVMTALMAPERSVKWHGSLVARVLLEDRNLPLNDSVSDWSSSLLSTVSHASKNDDIPLAQAALSAFLASVERFPGAQKKIMEKGLHLMRDAAMRTQKHGEVQEALAKALELLSTGRMHLSAEESQRWSAILLQWVFGKFSSESLRASATKILSCILDDYGPSSIPISQGWLAILLIEILDSTKKPAVNGATQLKNDKVKTKIEQSNIVFASQVANQLAGAVVNLAVHQFGATTDSLDTSPLADLLSREPFIAPLKNIKKEISPKFDAADSAMATMKGIKALTEVCADDSSCQSRIADFGVLFLLRRLLLCDDYEKLAAMEAYDASRVLEAQERVSNASGEPSLSEKKNDSSSVRVPPTAHIRRHAARLLTILSLLEKVQKEILSDDEFCRWLEDCANGAIPGCNDGKLQSYARATLLNIFCINRRASENDSPSEPTNRKKNCPRYDDMIFLINPELPHWKVHEEEEQDTVQKDDESSLSLANFIDIDGVAVARHVNDNNASSSSDSRRDSPLVDVVFIHGLRGGPYKSWRISEDKSSTKSGLVEKIDQEAGKLGTFWPGEWLSSDFPRARMFTLKYKTNLTQWSGASLPLQEVSSMLLDKLVAAGIGERPVVFVTHSMGGLVVKEMLHKAKTENIDNLVKNTVGVVFYSCPHFGSKLADMPWRMGLVFRPAPTIGELRSGSPKLVELNDFLRHLHKKGLLEVLSFCETKVTPIVEGYGGWAFRMEIVPIESAYPGFGELVVLESTDHINSCKPLSRTDPSYTETLEFLQKLKARIPAKVDDCRTKIVSLNVPSPMPESVALHSLERMSSTHASISCSFSFLGSSRPLMICASVRTRNMKFRNGGALRLCCSDSNHSAPLPSTTATSTGPPPPVLKRRNRYRKEYPGESKGITEELRFVAMRLRNVNGKKLPSDAVDSSSEDEVEEEDDGNLVLSDNDNDENEDTETWQPSLEGFLKYLVDSKLVFSTVEQIVDESSDVAYSYFRKSELERSECLAKDLEWFSEQGIEIPEPSNPGVSYAKYLEELSERSAPLFLCHYYNIYFSHIAGGQVIAKQVSERLLEGRKLEFYTWAGDAEELLKNVREKLNMLGEHWSRDEKNKCLREATKSFRSLGQIVRLIIL 1553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82587641 82604367 - Hsped.01g17420.1 Hepe01g1742 560852

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1742 1553 MobiDBLite consensus disorder prediction 766 789 - -
Hepe01g1742 1553 Pfam Heme oxygenase 1386 1549 IPR016053 GO:0004392(InterPro)|GO:0006788(InterPro)
Hepe01g1742 1553 CDD HemeO 1381 1551 IPR002051 GO:0004392(InterPro)|GO:0006788(InterPro)
Hepe01g1742 1553 MobiDBLite consensus disorder prediction 1290 1311 - -
Hepe01g1742 1553 MobiDBLite consensus disorder prediction 25 43 - -
Hepe01g1742 1553 SUPERFAMILY Heme oxygenase-like 1379 1550 IPR016084 -
Hepe01g1742 1553 Gene3D - 75 294 IPR011989 -
Hepe01g1742 1553 MobiDBLite consensus disorder prediction 25 58 - -
Hepe01g1742 1553 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 1208 - -
Hepe01g1742 1553 MobiDBLite consensus disorder prediction 1342 1379 - -
Hepe01g1742 1553 Gene3D alpha/beta hydrolase 947 1134 IPR029058 -
Hepe01g1742 1553 MobiDBLite consensus disorder prediction 766 788 - -
Hepe01g1742 1553 SUPERFAMILY alpha/beta-Hydrolases 943 1205 IPR029058 -
Hepe01g1742 1553 MobiDBLite consensus disorder prediction 1350 1379 - -
Hepe01g1742 1553 SUPERFAMILY ARM repeat 405 829 IPR016024 -
Hepe01g1742 1553 Gene3D - 1373 1552 IPR016084 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1742 K23504 - - csv:101222471 2019.2
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1742 Hepe-Chr1:82587641 Hepe09g0682 Hepe-Chr9:6468243 2.17e-58 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g810 . . . . . . . . . . Cma01g01856 . Car01g01447 . . . . . . . . . . . . . . . . . . Cone4ag1560 Cone7ag1391 . . Lsi04g01581 Csa04g02388 . . . . Bda08g01328 . . . . Bma05g00095 . Cmo01g01917 . . . . . . . Bhi09g03350 . . . Hepe01g1742 Mch11g0268 . Cla05g02021 Cam05g2171 Cec05g2187 Cco05g2235 Clacu05g2164 Cmu05g2032 Cre05g2160 . . Chy07g00114 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005432 1 4 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5 2 1 39