Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1748 ATGTCCACGAGGAGTGAACATCATACAGTCCCGCTCTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCTTACATGGTCAGGCGTGTCATAGTAAGAAAGGGGAGGATTTTACATTGCTAAAGACGGAATGCGAGAGAGTGGTGGGAGATGGAGTCTCTACGTATTCCGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCTGCGGCTATTTATACGAAGGAGAATCTGCTGAACAATGTTTTAGCTGCTATTCCATCAGATCTCAACAGAGATGAATGGATTGCAGCATTGCCAAGGGCCTTGGTTGCAGGTTTTGTGAAGACGGACAAAGATTTACAAGAGAAAGCACAAACATCAGGAACCACCGTCACCTTCATGATCATTGAGGGATGGGTTCTCACTGTTGCTTCTGTTGGTGATTCCCGATGCACTTTAGAATCAACTGAAGGTGGCATCCACTACTTATCAGCAGATCATAGACTAGAATGCAACGAAGAAGAGAGAGAACGTATAATTGCTAGTGGTGGTGAGGTGGGCCGACTAAATACTGGTGGTGGTGCAGAGATTGGTCCATTGAGATGCTGGCCCGGTGGCTTGTGTCTATCACGATCGATTGGTGATATGGATATTGGCGAGTTTATAGTGCCTGTTCCCTACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTATATCAGCTGAAACTGCCTATGATTGTTGTCGGGGGATGCCGGCAGAAACTGCTGCTGCACAGATTGTCAAAGAAGCAGTACAGTCAAAGGGACTTCGAGATGATACTACATGTATTGTGATTGACATATATCCGAGGGAGAAACTACCTACTGCTTTGCCGCCACCAAAGAAGCAGGGAAAAGGAATGTTTAAAGCAATATTCCAAAAAAAAAAAGCTTCTGAATCATCTTCTCATTTTGAGAAGGAATATAATGAGCCGGATGTTGTTGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGATGCCAAGTATCCTATCTGCAACATGTTTAAGCTGTTTGTATGCGCAGTATGCCAAGTTGAGATCCAACCTCGGGAGGGTGTTTCCATATATGCCGACTCATCTAACAGAGGAAAATTACGCGCTTGGGATGGACCTTTTCTATGCATAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGACCATCTGGAGGTTTGTGGATCCTGTGTTTGTGTGTGATTCTGAATAGACACAGCAGTGGAAGTGACTAG 1323 44.52 MSTRSEHHTVPLSVLLKRELAIEKIERPEILHGQACHSKKGEDFTLLKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYTKENLLNNVLAAIPSDLNRDEWIAALPRALVAGFVKTDKDLQEKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESTEGGIHYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDAISAETAYDCCRGMPAETAAAQIVKEAVQSKGLRDDTTCIVIDIYPREKLPTALPPPKKQGKGMFKAIFQKKKASESSSHFEKEYNEPDVVEELFEEGSAMLSERLDAKYPICNMFKLFVCAVCQVEIQPREGVSIYADSSNRGKLRAWDGPFLCISCQEKKEAMEGKRPSGGLWILCLCVILNRHSSGSD 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82629468 82635581 + Hsped.01g17480.1 Hepe01g1748 560858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1748 440 ProSiteProfiles PPM-type phosphatase domain profile. 33 293 IPR001932 -
Hepe01g1748 440 Gene3D - 34 300 IPR036457 -
Hepe01g1748 440 Pfam Protein phosphatase 2C 54 278 IPR001932 -
Hepe01g1748 440 SMART PP2C_4 26 291 IPR001932 -
Hepe01g1748 440 PANTHER PROTEIN PHOSPHATASE 36 292 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe01g1748 440 FunFam probable protein phosphatase 2C 12 32 299 - -
Hepe01g1748 440 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Hepe01g1748 440 CDD PP2Cc 39 293 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1748 Hepe-Chr1:82629468 Hepe09g1703 Hepe-Chr9:51781406 1.03e-165 dispersed
Hepe01g1748 Hepe-Chr1:82629468 Hepe05g0665 Hepe-Chr5:11002837 1.10e-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1748 - - - 0.0