Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g1760 | ATGGGTGTAATTTTTGTATCTCTTTTCGTATTATTTCTCACTCTATTATTATGGTACATTTCCTTAAACAGAAACAAGAAGGCAGCCATTGCAAATAATGGAGGACCTAAGCTCCCTCCTGGTTCTTTGGGTTGGCCTTATATTGGAGAAACCCTTCAACTCTATTCTCAACATCCCGATTTCTTCTTCGCCTCCAAACAGAAAAGGTATGGAGAGATTTTTAAGACGCATATTCTTGGATGTCCTTGTGTGATGTTGGCTAGCCCCGAGGCGGCGAGGTTTGTGCTGACCACACAAGCTCATTTGTTTAAGCCTACTTACCCCAAAAGTAAAGAGCTTTTGATCGGTCCATCAGCCCTGTTTTTTCACCAAGATGACTATCATTTCCGCCTAAGGAAGCTGGTTCAAAACTCTCTTTCTTTGGACGCCATTCGGAGGTTGGTGCCCGATATCGACTCCACCGCCGCCTCCGCTCTCGACTCTTGGGCCGGTGGACACCTTATTAACACCTTTCATGAAATGAAAAAGATATCATTTGAAGTAGGGATATTGACCATTTTTGGGCATTTAGAAGCTGCTTACAAAGAGGACCTTAAAAAGAACTACAGCATATTGGACGCAGGCTACAATTCTTTTCCCACCAACATTCCCGGAACTCTATACAAAAAGGCACTCTCAGCAAGAAAGCGACTAAGTAAAATATTAGGTGACATAATCCATGAGAGAAGGGAAAAAAAGGTGGGTGAGAAGGATTTATTAGGATGCCTTATGAAGTCTATAGATGAAGAAGGTGAAGTTATAAGCGATGCACAAATAGCAGATAACATAATAGGAGTTCTTTTTGCTGCTCAAGACACTACAGCTAGTGTCATGACTTGGATTGTCAAGTACCTTTATGACCAACCCAAGCTTCTCCACACCGTTAAGGCAGAACAAGAGGGAATACTAGAATTCAATGGAGAGAATAATCAACGATTGAACTGGGTTCAGACAAGAAACATGCCGATGAGTTACAAGCTGGTATTGGAGAGCTTAAGGATGGCGAGCATTATATCATTCACTTACAGAGAAGCTGTAGCTGATGTGGAATACAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCCGAAACATCCATCACAGTCCAGAATATTTCGCCGATCCTCACAAATTCGACCCTTCCCGATTCGAGGTTGCACCAAAACCCAATACATTTATGCCATTTGGCAGTGGAGTTCATGCCTGCCCAGGAAATGAACTTGCCAAGCTGGAGATCTTGATCATGATTCATCATCTAGTCACCAAGTTCAGGTGGGAATTGGTTGGTTCGCAAAACGGGGTTCAGCATAGTCCATTTCCAGTTCCATTTCAAGGCCTTCCAGCTAGATTTTGGAGGATAGCCCACTAG | 1419 | 42.85 | MGVIFVSLFVLFLTLLLWYISLNRNKKAAIANNGGPKLPPGSLGWPYIGETLQLYSQHPDFFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLTTQAHLFKPTYPKSKELLIGPSALFFHQDDYHFRLRKLVQNSLSLDAIRRLVPDIDSTAASALDSWAGGHLINTFHEMKKISFEVGILTIFGHLEAAYKEDLKKNYSILDAGYNSFPTNIPGTLYKKALSARKRLSKILGDIIHERREKKVGEKDLLGCLMKSIDEEGEVISDAQIADNIIGVLFAAQDTTASVMTWIVKYLYDQPKLLHTVKAEQEGILEFNGENNQRLNWVQTRNMPMSYKLVLESLRMASIISFTYREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFADPHKFDPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEILIMIHHLVTKFRWELVGSQNGVQHSPFPVPFQGLPARFWRIAH | 472 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 82707553 | 82711343 | - | Hsped.01g17600.1 | Hepe01g1760 | 560870 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g1760 | 472 | PRINTS | P450 superfamily signature | 419 | 430 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | P450 superfamily signature | 410 | 419 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | P450 superfamily signature | 339 | 350 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | P450 superfamily signature | 282 | 299 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 412 | 421 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe01g1760 | 472 | FunFam | Abscisic acid 8 | 28 | 469 | - | - | |
| Hepe01g1760 | 472 | Pfam | Cytochrome P450 | 39 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | E-class P450 group I signature | 378 | 402 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | E-class P450 group I signature | 409 | 419 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | E-class P450 group I signature | 419 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | E-class P450 group I signature | 271 | 288 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PRINTS | E-class P450 group I signature | 291 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | SUPERFAMILY | Cytochrome P450 | 36 | 468 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | Gene3D | Cytochrome P450 | 28 | 469 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1760 | 472 | PANTHER | CYTOCHROME P450 26 | 37 | 447 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Hepe01g1760 | 472 | CDD | CYP90-like | 67 | 466 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g1760 | Hepe-Chr1:82707553 | Hepe02g0585 | Hepe-Chr2:5930217 | 5.81e-233 | dispersed | |
| Hepe07g0864 | Hepe-Chr7:10900098 | Hepe01g1760 | Hepe-Chr1:82707553 | 5.71e-192 | transposed | |
| Hepe07g2298 | Hepe-Chr7:67299842 | Hepe01g1760 | Hepe-Chr1:82707553 | 1.39e-55 | transposed | |
| Hepe01g1760 | Hepe-Chr1:82707553 | Hepe08g1280 | Hepe-Chr8:13982169 | 7.23e-200 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g1760 | K09843 | - | csv:101213916 | 822.002 |