Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1760 ATGGGTGTAATTTTTGTATCTCTTTTCGTATTATTTCTCACTCTATTATTATGGTACATTTCCTTAAACAGAAACAAGAAGGCAGCCATTGCAAATAATGGAGGACCTAAGCTCCCTCCTGGTTCTTTGGGTTGGCCTTATATTGGAGAAACCCTTCAACTCTATTCTCAACATCCCGATTTCTTCTTCGCCTCCAAACAGAAAAGGTATGGAGAGATTTTTAAGACGCATATTCTTGGATGTCCTTGTGTGATGTTGGCTAGCCCCGAGGCGGCGAGGTTTGTGCTGACCACACAAGCTCATTTGTTTAAGCCTACTTACCCCAAAAGTAAAGAGCTTTTGATCGGTCCATCAGCCCTGTTTTTTCACCAAGATGACTATCATTTCCGCCTAAGGAAGCTGGTTCAAAACTCTCTTTCTTTGGACGCCATTCGGAGGTTGGTGCCCGATATCGACTCCACCGCCGCCTCCGCTCTCGACTCTTGGGCCGGTGGACACCTTATTAACACCTTTCATGAAATGAAAAAGATATCATTTGAAGTAGGGATATTGACCATTTTTGGGCATTTAGAAGCTGCTTACAAAGAGGACCTTAAAAAGAACTACAGCATATTGGACGCAGGCTACAATTCTTTTCCCACCAACATTCCCGGAACTCTATACAAAAAGGCACTCTCAGCAAGAAAGCGACTAAGTAAAATATTAGGTGACATAATCCATGAGAGAAGGGAAAAAAAGGTGGGTGAGAAGGATTTATTAGGATGCCTTATGAAGTCTATAGATGAAGAAGGTGAAGTTATAAGCGATGCACAAATAGCAGATAACATAATAGGAGTTCTTTTTGCTGCTCAAGACACTACAGCTAGTGTCATGACTTGGATTGTCAAGTACCTTTATGACCAACCCAAGCTTCTCCACACCGTTAAGGCAGAACAAGAGGGAATACTAGAATTCAATGGAGAGAATAATCAACGATTGAACTGGGTTCAGACAAGAAACATGCCGATGAGTTACAAGCTGGTATTGGAGAGCTTAAGGATGGCGAGCATTATATCATTCACTTACAGAGAAGCTGTAGCTGATGTGGAATACAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCCGAAACATCCATCACAGTCCAGAATATTTCGCCGATCCTCACAAATTCGACCCTTCCCGATTCGAGGTTGCACCAAAACCCAATACATTTATGCCATTTGGCAGTGGAGTTCATGCCTGCCCAGGAAATGAACTTGCCAAGCTGGAGATCTTGATCATGATTCATCATCTAGTCACCAAGTTCAGGTGGGAATTGGTTGGTTCGCAAAACGGGGTTCAGCATAGTCCATTTCCAGTTCCATTTCAAGGCCTTCCAGCTAGATTTTGGAGGATAGCCCACTAG 1419 42.85 MGVIFVSLFVLFLTLLLWYISLNRNKKAAIANNGGPKLPPGSLGWPYIGETLQLYSQHPDFFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLTTQAHLFKPTYPKSKELLIGPSALFFHQDDYHFRLRKLVQNSLSLDAIRRLVPDIDSTAASALDSWAGGHLINTFHEMKKISFEVGILTIFGHLEAAYKEDLKKNYSILDAGYNSFPTNIPGTLYKKALSARKRLSKILGDIIHERREKKVGEKDLLGCLMKSIDEEGEVISDAQIADNIIGVLFAAQDTTASVMTWIVKYLYDQPKLLHTVKAEQEGILEFNGENNQRLNWVQTRNMPMSYKLVLESLRMASIISFTYREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFADPHKFDPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEILIMIHHLVTKFRWELVGSQNGVQHSPFPVPFQGLPARFWRIAH 472
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 82707553 82711343 - Hsped.01g17600.1 Hepe01g1760 560870
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1760 472 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe01g1760 472 FunFam Abscisic acid 8 28 469 - -
Hepe01g1760 472 Pfam Cytochrome P450 39 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 SUPERFAMILY Cytochrome P450 36 468 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 Gene3D Cytochrome P450 28 469 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1760 472 PANTHER CYTOCHROME P450 26 37 447 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Hepe01g1760 472 CDD CYP90-like 67 466 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1760 Hepe-Chr1:82707553 Hepe02g0585 Hepe-Chr2:5930217 5.81e-233 dispersed
Hepe07g0864 Hepe-Chr7:10900098 Hepe01g1760 Hepe-Chr1:82707553 5.71e-192 transposed
Hepe07g2298 Hepe-Chr7:67299842 Hepe01g1760 Hepe-Chr1:82707553 1.39e-55 transposed
Hepe01g1760 Hepe-Chr1:82707553 Hepe08g1280 Hepe-Chr8:13982169 7.23e-200 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1760 K09843 - csv:101213916 822.002