Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1772 ATGGATCAAAATGATCATCATCTAAAATCAGAGGATCAGATGGAGATTATCATGATGATGCAACAGATGGAAAAAATCCCAGAATTTTGCAGTGCTTACAATGATCTCTCACCGCCGTCTGATTTCAGCTCAAGTAGCACAGACCCACACTGCCTGGAAAACCTTCAACAAGCCGCAGAGTCATCTCCTCCATTCATGAACCTACCTTTTCCCCCAACTGTTGAACAAGGGTCGGTTCTGGCGGCAACAGCTCCATTCCTCACCACTTCACGGTGGCGAAATTCAGTACTTACCAGTGGTGAAAGCGACGAGTCGCAGAAGCAGAGGTCAGTGGCGGCTATGAGGGAGATGATATTCCGAATGGCAGTGATGCAACCAATTCACATAGACCCAGAATCGGTGAAGCCACCAAAAAGAAGGAACGTGAAGATTTCAACAGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGCGAATAAGTGAGAGAATTAGGATACTTCAAAGACTTGTCCCTGGAGGTACCAAAATGGATACAGCTTCCATGTTGGACGAAGCTATACATTACGTAAAATTCTTAAAGACCCAAGTGCAGTCGCTAGAAAGAGCTGCCGCTAACAGGGCAATCAGTGCTACTGCTGCTGCAGCAGGAGGTGGTGGTGTAGTAGGGTTTCCTTTGGAAATGTCAAGTGGGAGCTATGTTCCCATGGCAAAACCATCCCGAATAATGCCTCACAACGTTGAGCAATTCGGAGATGCTTAA 762 46.85 MDQNDHHLKSEDQMEIIMMMQQMEKIPEFCSAYNDLSPPSDFSSSSTDPHCLENLQQAAESSPPFMNLPFPPTVEQGSVLAATAPFLTTSRWRNSVLTSGESDESQKQRSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRAISATAAAAGGGGVVGFPLEMSSGSYVPMAKPSRIMPHNVEQFGDA 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82828504 82831904 - Hsped.01g17720.1 Hepe01g1772 560882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1772 253 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 30 213 IPR045843 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g1772 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983(InterPro)
Hepe01g1772 253 FunFam BHLH transcription factor 147 211 - -
Hepe01g1772 253 Pfam Helix-loop-helix DNA-binding domain 153 194 IPR011598 GO:0046983(InterPro)
Hepe01g1772 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 202 IPR036638 GO:0046983(InterPro)
Hepe01g1772 253 MobiDBLite consensus disorder prediction 131 156 - -
Hepe01g1772 253 Gene3D - 147 213 IPR036638 GO:0046983(InterPro)
Hepe01g1772 253 SMART finulus 150 199 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1772 Hepe-Chr1:82828504 Hepe03g1487 Hepe-Chr3:71700449 1.66e-33 dispersed
Hepe04g0735 Hepe-Chr4:61261071 Hepe01g1772 Hepe-Chr1:82828504 3.42e-25 transposed
Hepe04g1118 Hepe-Chr4:66094109 Hepe01g1772 Hepe-Chr1:82828504 4.60e-40 transposed
Hepe01g1772 Hepe-Chr1:82828504 Hepe04g1255 Hepe-Chr4:68034645 2.10e-08 wgd
Hepe01g1772 Hepe-Chr1:82828504 Hepe08g1290 Hepe-Chr8:14350005 2.52e-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54856 PF00010 HLH 1.70E-06 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1772 - - - 0.0