Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g1772 | ATGGATCAAAATGATCATCATCTAAAATCAGAGGATCAGATGGAGATTATCATGATGATGCAACAGATGGAAAAAATCCCAGAATTTTGCAGTGCTTACAATGATCTCTCACCGCCGTCTGATTTCAGCTCAAGTAGCACAGACCCACACTGCCTGGAAAACCTTCAACAAGCCGCAGAGTCATCTCCTCCATTCATGAACCTACCTTTTCCCCCAACTGTTGAACAAGGGTCGGTTCTGGCGGCAACAGCTCCATTCCTCACCACTTCACGGTGGCGAAATTCAGTACTTACCAGTGGTGAAAGCGACGAGTCGCAGAAGCAGAGGTCAGTGGCGGCTATGAGGGAGATGATATTCCGAATGGCAGTGATGCAACCAATTCACATAGACCCAGAATCGGTGAAGCCACCAAAAAGAAGGAACGTGAAGATTTCAACAGACCCACAAAGCGTAGCGGCTCGACATAGAAGAGAGCGAATAAGTGAGAGAATTAGGATACTTCAAAGACTTGTCCCTGGAGGTACCAAAATGGATACAGCTTCCATGTTGGACGAAGCTATACATTACGTAAAATTCTTAAAGACCCAAGTGCAGTCGCTAGAAAGAGCTGCCGCTAACAGGGCAATCAGTGCTACTGCTGCTGCAGCAGGAGGTGGTGGTGTAGTAGGGTTTCCTTTGGAAATGTCAAGTGGGAGCTATGTTCCCATGGCAAAACCATCCCGAATAATGCCTCACAACGTTGAGCAATTCGGAGATGCTTAA | 762 | 46.85 | MDQNDHHLKSEDQMEIIMMMQQMEKIPEFCSAYNDLSPPSDFSSSSTDPHCLENLQQAAESSPPFMNLPFPPTVEQGSVLAATAPFLTTSRWRNSVLTSGESDESQKQRSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRAISATAAAAGGGGVVGFPLEMSSGSYVPMAKPSRIMPHNVEQFGDA | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 82828504 | 82831904 | - | Hsped.01g17720.1 | Hepe01g1772 | 560882 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g1772 | 253 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 30 | 213 | IPR045843 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe01g1772 | 253 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 144 | 193 | IPR011598 | GO:0046983(InterPro) | |
Hepe01g1772 | 253 | FunFam | BHLH transcription factor | 147 | 211 | - | - | |
Hepe01g1772 | 253 | Pfam | Helix-loop-helix DNA-binding domain | 153 | 194 | IPR011598 | GO:0046983(InterPro) | |
Hepe01g1772 | 253 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 149 | 202 | IPR036638 | GO:0046983(InterPro) | |
Hepe01g1772 | 253 | MobiDBLite | consensus disorder prediction | 131 | 156 | - | - | |
Hepe01g1772 | 253 | Gene3D | - | 147 | 213 | IPR036638 | GO:0046983(InterPro) | |
Hepe01g1772 | 253 | SMART | finulus | 150 | 199 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1772 | Hepe-Chr1:82828504 | Hepe03g1487 | Hepe-Chr3:71700449 | 1.66e-33 | dispersed | |
Hepe04g0735 | Hepe-Chr4:61261071 | Hepe01g1772 | Hepe-Chr1:82828504 | 3.42e-25 | transposed | |
Hepe04g1118 | Hepe-Chr4:66094109 | Hepe01g1772 | Hepe-Chr1:82828504 | 4.60e-40 | transposed | |
Hepe01g1772 | Hepe-Chr1:82828504 | Hepe04g1255 | Hepe-Chr4:68034645 | 2.10e-08 | wgd | |
Hepe01g1772 | Hepe-Chr1:82828504 | Hepe08g1290 | Hepe-Chr8:14350005 | 2.52e-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54856 | PF00010 | HLH | 1.70E-06 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g1772 | - | - | - | 0.0 |