Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1786 ATGAATAACACAAATTTCGTCTGTAATCCTATGGACGCTCTGCCATTATTAACCTCGGCCTCTCAGTTGCTGTTTTCGAATAACGCCATCAATTTCAGGCACAGGGTATCCATTCCTGTAAAACCCACTTTTCAGGGTTCGTGTAGATGGCGAATTCGAGCCACCGCCGAAAACGGAGCTTCATCGGCGTCGACCTCCGAGATCGACATGGTGAGGAACAGAGAGGGGATTTTCACCGCCAAACAAAGCAAAGTCGTCGTGCTTTGGGATCTCGACAACAAACCCCCTCGTGGCCCGCCGTACGAGGCGGCTATGGCCCTCAAACGAGTGGCGCAACGCTTCGGGGAAGTTGTCGAAATGTCGGCTTACGCCAATCGTCACGCCTTTATCCATTTGCCGCAATGGGTTGTCGAGGAACGCCGCGAGCGTCGGCAATTGGACATTTTTGAGCGCAAAGGGTTGATCACGCCGTCCGAATCGTACGTCTGTGGGGTTTGCGGTCGTAAGTGCAAAACAAACCTAGACCTCAAGAAGCATTTCAAGCAACTTCACGAACGCGAGCGCCAGAAGAAATTGAACAGAATGAAGTGTCTCAAGGGCAAAAAGCGGCAGCGTTATAAAGAAAGGTTCGTATCTGGGAACCATAAGTACAATGAAGCGGCCAGATCTCTGATTACTCCGAAAGTTGGGTATGGGTTGGCCTCGGAATTGAGACGTGCTGGGGTTTTTGTGAAGACAGTGGAGGATAAGCCGCAGGCGGCTGATTGGGCTTTGAAGCGGCAGATGCGGCACTCTATGAGTCGTGGTATTGATTGGATGTTTTTGGTTTCCGATGATTCTGATTTCTCAGAGATGTTAAGGAAGGCTAAGGAGGCTAATTTGGGGACTGTGGTGGTGGGGGATCGTGATAGAGCATTGGGTAGGTACGCTGATTTATGGGTTCCATGGATGGGAGTTGAAAATGGGGATGTTACAGAGGAGGATTTGGTGCCCAAAAGATGGAGGATGAGGAGGAGCGATGAGGATTTGGATGAAGATGATGGATTTTCAGTTTCTCGTTTTTATGGAGAAATTGAAGCTGGTAGTGATTTGGAGAGTGTAGTGGAAGAGCTTGCTTCCGCAAGTACAGGGTTCAATCGCTTTAGAATTTCTGCATTTTCAGATGGGGAAGATGAAGAAGAAGAAGAAGATGATGAATGGGTTGAAGAGGATGTGGCAAATGACTATCTGCTAGTGATGAGTGACGAGGAAGATGAGTATTTCTGA 1266 48.58 MNNTNFVCNPMDALPLLTSASQLLFSNNAINFRHRVSIPVKPTFQGSCRWRIRATAENGASSASTSEIDMVRNREGIFTAKQSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGEVVEMSAYANRHAFIHLPQWVVEERRERRQLDIFERKGLITPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKCLKGKKRQRYKERFVSGNHKYNEAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMRHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRYADLWVPWMGVENGDVTEEDLVPKRWRMRRSDEDLDEDDGFSVSRFYGEIEAGSDLESVVEELASASTGFNRFRISAFSDGEDEEEEEDDEWVEEDVANDYLLVMSDEEDEYF 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82937574 82939658 - Hsped.01g17860.1 Hepe01g1786 560896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1786 421 ProSitePatterns Zinc finger C2H2 type domain signature. 163 184 IPR013087 -
Hepe01g1786 421 ProSiteProfiles Zinc finger C2H2 type domain profile. 161 189 IPR013087 -
Hepe01g1786 421 Gene3D - 159 317 - -
Hepe01g1786 421 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 52 398 - -
Hepe01g1786 421 CDD PIN_LabA-like 171 301 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1786 Hepe-Chr1:82937574 Hepe06g1163 Hepe-Chr6:60999919 1.50e-65 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54860 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1786 - - - 0.0