Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1839 ATGAGTAATCTCATTAGAAGGGAAGATTGGGTGGATTTTGATTTTTTGAGTAGTGACCATTTTGAAGATGCCCACGACTACGATTCTCCTCCGTGTCCCTGTTTTGTTGGTTGTTCTTTTACTGGTGGTCGCCGCCGTAGGGTCTTTCCGGACAGTGAAGTTTCTGCCGGGATTCTCAGGTCCTCTTCCTTTCGTACTGGAAACAGGGAGTATGAATACTTACTTGCTACCTATTGGATTAACGACGACCGAGTTCGAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGGTGAGATGTAAGGACAACGGATATTACGTTTATGAGCGTGATAGTGTTTTTCCTTATCATGTGAACCTTAGTTCTGAAGGCTATCGATCGTTAATCTTTAGTGGGGATCATGATATGAAAGTGCCGCATATGGAAACTCAAGCATGGATCAAATCTTTAAATTATTCCATTGTCGATGATTGGAGGCCATGGTTTATCGAGGATGATGTAGCCGGATACACAAGAAGTTATGCAAATAATATGACATTTGCAAGTATAAAAGTAAGAGGAAAATTGAGGGTGGGGGGCATACGCCACAATACACACGAAAGGAATGCAGCATACTGTTTAACAGGTGGATAG 639 42.1 MSNLIRREDWVDFDFLSSDHFEDAHDYDSPPCPCFVGCSFTGGRRRRVFPDSEVSAGILRSSSFRTGNREYEYLLATYWINDDRVRKALHIHEGSIGEWVRCKDNGYYVYERDSVFPYHVNLSSEGYRSLIFSGDHDMKVPHMETQAWIKSLNYSIVDDWRPWFIEDDVAGYTRSYANNMTFASIKVRGKLRVGGIRHNTHERNAAYCLTGG 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83290666 83291868 - Hsped.01g18390.1 Hepe01g1839 560949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1839 212 Gene3D alpha/beta hydrolase 25 191 IPR029058 -
Hepe01g1839 212 Pfam Serine carboxypeptidase 65 186 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Hepe01g1839 212 SUPERFAMILY alpha/beta-Hydrolases 65 186 IPR029058 -
Hepe01g1839 212 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 72 190 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1839 Hepe-Chr1:83290666 Hepe03g0050 Hepe-Chr3:630147 4.76e-58 dispersed
Hepe01g1839 Hepe-Chr1:83290666 Hepe01g1841 Hepe-Chr1:83318481 8.12e-58 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1839 K16296 - csv:101207623 206.068