Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1867 ATGGGAATCTGTATATCCTTTGCATCTTTTCAGATTCGCCATGAAACTAAAGTTGAGACTATTTGTACAACAAACGATGTCGTTTTTAAAGAAGAAGATTTTAGCTTTGTCTGTGGGACTCCCAATATTGAATCCATTCTTTCCAAAGAAGGGATCAAAGGGCTCAACCAAGATGCTGCCTTTTTCTATCAAGAGTATGGAGGACAGGACAGGGATTTGCTTGGAGTATTTGATGGGCATGGAAAAAATGGTCATATTGTAAGCAGTATGGTGAAGGATAGACTACCTTCGTTGTTGCTTGGGCAGATAAATAATAATGGTATGTCAAATTTGGAAAACAGAGATTGTGAAAAGCACTTTGATGTGAGAGATGGGGAATTGGTTCAAAGCAACAATTTTGTATCGTGGAAACAAGCTTTTGTGACTGCCTTCAAGGTTATGGACAAGGAGATCAAACTTCGAGAGAATTTGGATTGCTCCTTCAGTGGATCCACTGCAGTTATCGCTCTCAAACAGGGAGAAGATTTGGTGATTGCAAATTTAGGAGATTCAAGGGCAGTGATGGGGAGAATGACCGCTGATGGAATCAAAGCCATTCAATTAACCACGGATTTGAAGCCCGGTTTGCCAATTGAGGCTGAGCGGATAAGGAAGTGTAATGGGAGAGTGTTGGCGCTGACAGAAGAACCACATATACAAAGAGTTTGGTTGCCCAAGGAAGATTTGCCGGGGCTGGCCATGTCCAGAGCTTTTGGAGATTTTGCTCTTAAAAAACATGGCATTATTGCTCTTCCCGACATCTCCTACCGCCGTCTAACTTCCGACGACCGCTTCATCGTCCTTGCCACCGATGGGATTTGGGACGTGCTAAGAAACGACCAAGTAGCGGCGATCGTGCGGGCGGCGGAGAGCGAAGAAGCGGCGGCGAAAGCAGTGATGGAGGCGGCGGCGGTGGCTTGGGAACGCTACCCTTCTAAACTCGATGACTGCACCGTCGTTTGCCTCTTTTTACAAAACCAACGCCAGACGGAAAATTAA 1038 45.38 MGICISFASFQIRHETKVETICTTNDVVFKEEDFSFVCGTPNIESILSKEGIKGLNQDAAFFYQEYGGQDRDLLGVFDGHGKNGHIVSSMVKDRLPSLLLGQINNNGMSNLENRDCEKHFDVRDGELVQSNNFVSWKQAFVTAFKVMDKEIKLRENLDCSFSGSTAVIALKQGEDLVIANLGDSRAVMGRMTADGIKAIQLTTDLKPGLPIEAERIRKCNGRVLALTEEPHIQRVWLPKEDLPGLAMSRAFGDFALKKHGIIALPDISYRRLTSDDRFIVLATDGIWDVLRNDQVAAIVRAAESEEAAAKAVMEAAAVAWERYPSKLDDCTVVCLFLQNQRQTEN 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83600673 83603966 - Hsped.01g18670.1 Hepe01g1867 560977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1867 345 CDD PP2Cc 51 337 IPR001932 -
Hepe01g1867 345 Gene3D - 44 340 IPR036457 -
Hepe01g1867 345 ProSiteProfiles PPM-type phosphatase domain profile. 43 337 IPR001932 -
Hepe01g1867 345 SMART PP2C_4 27 335 IPR001932 -
Hepe01g1867 345 PANTHER PROTEIN PHOSPHATASE 56 336 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe01g1867 345 ProSitePatterns PPM-type phosphatase domain signature. 73 81 IPR000222 GO:0043169(InterPro)
Hepe01g1867 345 SMART PP2C_SIG_2 47 337 IPR001932 -
Hepe01g1867 345 SUPERFAMILY PP2C-like 46 339 IPR036457 -
Hepe01g1867 345 Pfam Protein phosphatase 2C 105 316 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1867 Hepe-Chr1:83600673 Hepe08g1761 Hepe-Chr8:34251428 8.22e-92 dispersed
Hepe01g1867 Hepe-Chr1:83600673 Hepe02g0152 Hepe-Chr2:1671125 1.05e-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1867 - - - 0.0