Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g1891 | ATGCAAGTGTTGAAATCCGAGAGCAGGGCCGGCCTACCAATTGTGGCGAGTTTACCTTTTGGAGTTGGTGCAATATTGTTCACGACGTTGTGCGTCGTGGGAGGGAGTTTGGTTTATTTCTATGGACCATACTGGGGAGTAAGAAGGGTGCCTGGTCCACCAGCTATTCCACTGGTCGGACACCTTCCCTTGCTGGCTAAGTACGGCCCGGACGTTTTCTCTGTCCTCGCCTCCCAATATGGCCCTATCTTCAGGTTCCATATGGGTAGGCAGCCATTGATAATTATTGCAGAGCCTGAGCTTTGTAAAGAAGTTGGTATCAAGAAATTCAAGGACATCCCTAATAGAAGTGTCCCTTCTCCAATATCAGCTTCCCCGCTTCATCAGAAAGGTCTTTTCTTCACAAGGGATGCAAGATGGTCGACAATGCGAAACACGATATTATCGGTCTATCAGCCCTCTCATCTAACGAGCCTAATACCTACAATGCAATCAATCATTGAAACTGCAACTCAAAATCTCCATTCCTCTGTCGAGGAAGACATCTCTTTCTCCAATCTCTCCCTCAAATTGACCACAGATGTGATTGGAACTGCAGCCTTCGGTGTCAACTTTGGGCTCTCTAATCCACAAGCAACCAAAACTTGTGCTACCAATGGCCAAGACAACAAAATTGATGAAGTTTCGGACTTCATCAATCAACATATCTACTCCACAACGCAGCTCAAGATGGATTTATCAGGTTCCTTCTCCATCATTTTGGGACTACTTGTCCCTATACTCCAAGAACCATTTAGACAAATCCTGAAGAGAATACCATTCACCATGGACTGGAAAGTTGACCGGACAAATCAGAAGTTGAGTGGTCGGCTTAACGAGATTGTCGACAAGAGAATGAAGTGTAACGATCGAGGTTCGAAAGACTTCTTATCACTCATTTTGAGAGCAAGAGAGTCAGAGACGGTATCGAGGAATGTCTTCACTCCAGACTACATCAGTGCAGTCACGTACGAACACCTACTTGCTGGGTCAGCTACCACGGCGTTCACTTTGTCCTCTGTTGTATATTTAGTTGCTGGACATTCCGAAGTTGAGAATAAGTTGCTAGAAGAGATTGACAACTTTGGCCCATTAGATCAGATACCAACAGCTAATGAGCTTCAGCAGAAGTTTCCATATCTTGATCAGGTGATTAAAGAGGCTATGAGGTTCTACACTGTTTCCCCTCTAGTAGCTAGAGAGACATCTAAAGATGTGGAGATTGGTGGATATCTTCTTCCAAAGGGGACATGGGTTTGGTTAGCACTTGGAGTTCTTGCCAAGGATCCAAAGAACTTTCCAGAACCAGATAAATTCAAACCAGAGAGATTCGATCCAAATGAGGAAGAGGAGAAACAAAGGCATCCCTATGCTTTGATCCCATTCGGAATAGGTCCTCGAGCATGCATCGGTCAAAAATTCGCCCTTCAGGAGTTGAAGCTCTCTTTGATTCATTTGTATAGGAAGTTTGTATTTCGGCATTCCCTCTCCATGGAACAACCTCTTGAACTTGAGTATGGTGTCATTCTCAACTTCAAGAATGGTGTCAAGCTCCGAGTGATAAACCGTAAATAG | 1614 | 44.55 | MQVLKSESRAGLPIVASLPFGVGAILFTTLCVVGGSLVYFYGPYWGVRRVPGPPAIPLVGHLPLLAKYGPDVFSVLASQYGPIFRFHMGRQPLIIIAEPELCKEVGIKKFKDIPNRSVPSPISASPLHQKGLFFTRDARWSTMRNTILSVYQPSHLTSLIPTMQSIIETATQNLHSSVEEDISFSNLSLKLTTDVIGTAAFGVNFGLSNPQATKTCATNGQDNKIDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPFTMDWKVDRTNQKLSGRLNEIVDKRMKCNDRGSKDFLSLILRARESETVSRNVFTPDYISAVTYEHLLAGSATTAFTLSSVVYLVAGHSEVENKLLEEIDNFGPLDQIPTANELQQKFPYLDQVIKEAMRFYTVSPLVARETSKDVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPDKFKPERFDPNEEEEKQRHPYALIPFGIGPRACIGQKFALQELKLSLIHLYRKFVFRHSLSMEQPLELEYGVILNFKNGVKLRVINRK | 537 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 83752764 | 83759979 | + | Hsped.01g18910.1 | Hepe01g1891 | 561001 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g1891 | 537 | PRINTS | E-class P450 group I signature | 395 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | E-class P450 group I signature | 351 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | E-class P450 group I signature | 191 | 209 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | E-class P450 group I signature | 435 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | E-class P450 group I signature | 331 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PANTHER | THROMBOXANE-A SYNTHASE | 28 | 536 | - | - | |
| Hepe01g1891 | 537 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 475 | 484 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe01g1891 | 537 | SUPERFAMILY | Cytochrome P450 | 43 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | Pfam | Cytochrome P450 | 51 | 517 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | P450 superfamily signature | 482 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | P450 superfamily signature | 342 | 359 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | P450 superfamily signature | 396 | 407 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | PRINTS | P450 superfamily signature | 473 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | Gene3D | Cytochrome P450 | 41 | 537 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g1891 | 537 | FunFam | Cytochrome P450 3A4 | 38 | 537 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g1891 | Hepe-Chr1:83752764 | Hepe10g1571 | Hepe-Chr10:52437193 | 1.39e-29 | dispersed | |
| Hepe01g1891 | Hepe-Chr1:83752764 | Hepe08g2561 | Hepe-Chr8:67226398 | 2.35e-26 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g1891 | K20771 | - | csv:101209772 | 992.645 |