Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1937 ATGGTCTGCGAGATGGAGACTGATGTTATAGAAGATATGGACATCGAAGCCCTTTCTTCTATGTGGCCTGAGGATGTTGGACCAGATGTTCGAAAACAGTTCAATGTAGAAAGGCCAGGAGCAGATCAAGATATGTTGAAAGAAGTTAACATAATCGAAGAACCGACAATTGTTGATTTCCAGAGACTGATAGAGTTAACTAACTATACTGAGAAAGGATCTTCTCAATTACAATATCTTGCAAAACAGTGGGAGTATAAGCAAGCAAATGCTGTGCGTCTCATTAAAGAAGAACTTGACATTCTAAGCAAGCAGAAGAAAGAAGTTGAGCTCAAGAAATTGAAGATATTAGAGGAACATCTTTTTGAGGAAGAAAGATATGCTGGTGATAAACGTCCAATTTCTATTTTGGAAGAATCTTGTGATCTATGGCAAGATATTCCAAGGAGAAAAACTGATCTCGTTGTTCAAAGTAAGAGAGTTGAAATTGATGCAGAGTATGATACAGTGACGTACTGGAAGCAGCGAGCCATGGATCTCGAAAAGTTCTTGGAAGCAAGTCTACAGCGAGAACAGATGCTCTCAGAGAAGCTTCAGGATAACATAAAAAATATTGAAAAGCAGTCCTCACCAGTTGAGGAATTGTCACAGATTCTGAAAAGAGCTGACAATTTTTTGCATTTTGTTCTGCAGAATGCACCAGTTGTTTTTGGTCATCAGGACAAAGAGTTGCGCTACCGATTTATCTACAATCATTTTCCTAGTTTGCAAGAAGAGGATATTATAGGAAGAACAGACGTCGAAATTTTTAGTGGTGCTGGTGTTAAGGAATCTCAAGATTTCAAGAAAGAAGTTCTGGAGAAAGGGTTGCCTGCAAAGAGGGAAATACAGTTTGATACAGAATTGTTTGGGCTGAAGACCTTTTTGATTTACGTTGAACCTGTCTTTAGCAAGGCTGGGGAGACAATTGGAATAAATTATATGGGAATGGACATAACTGATCAGGTAGTTAAAAAAAGAGAAAAGATGGCAAAGCTTCGTGAGGAGATAGCAGTACAAAAAGCCAAGGAATCAGAACTGAACAAAACAATTCATATTACGGAGGAGACAATGCGAGCAAAGCAAATGCTAGCAACCATGTCCCATGAAATTAGATCTCCACTGTCTGGAGTGGTTAGTATGGCTGAGATCCTGTCCACCACAAAACTTGACCGGGAACAACAACATCTGTTGGATGTTATGCTGTCTTCAGGAGACTTGGTTCTTCAACTTATAAACGATATCTTGGACCTGTCTAAAGTTGAATCAGGAGTAATGAAATTGGAAACTACAAAATTCCGTCCAAGAGAGGTTGTAAACCATATTCTGCAGACTGCTGCCGCATCATTGCGAAAATTCTTAGTTCTGGAGGGACGTATAGCAGATGATGTTCCTATAGAGGTCATTGGAGATGTTCTTAGGATTCGGCAAATCCTCACCAACTTGATCAGCAACGCAATCAAGTTCACTCATAAAGGGAAGGTTGGAATTAAACTTTATGTTTTACCCTATCCACCCATTATTGGCAAAGGAGAAGAATGCCATAAGAAATCAACGGCTGATAACTCAACAGTTCCAGTAAATGGTTTGCAAGAAGGAACATGTCATCCAGCCCCTCAGAATGGCTTTTGTGGCCAAAAACAAGGTGACAGAAATCATTTGCATTGTGATGGACCAGGAACTCCAAACAAGAGTGAAGCCACAATGAATGGAAATAGAGAAAACAAATCTTGTTCGCCCGAAACGACGGTATGGATACGCTGCGATGTATACGATACAGGAATTGGAATACCAGAAAATGCATTACCAACCCTTTTTAAGAGGTACATGCAAGCTAGTGCCGATCATGCTCGAAAATATGGAGGGACTGGACTTGGACTAGCAATATGCAAACAACTGGTTGAATTGATGGGTGGTCATCTCACCGTTACCAGCCGAGAGAACCATGGCTCTACATTTACATTTGTATTGCCATACAAGGTTTCAACCACCAGCAGTCCTTCCGAAGATTCCGATGAGCTCTCAGACGACGAGTCCACAAATGACGAAATGACTGAGGGCTTTTTCCAATTCCAACCCCACAGTTTCAGTTCACTATCCTCTTCTAATGGATCCACAAGGATCCCAAACTCATTGTTACATACATCTGGCTATCCCAGCTCAACCAAACTCAATGGATTTGCTGAAGCTTCTTATCCTTTTCCCTCGAACAACATCACACCACAAGAGACTGCTTCTCTTAGAGATGCCAGTTCAGCCGATGCCACATTAACCTCAAGTGAATCACAATGTTCATCAAGTCAGATCAACTCAAATCTCGATAACGAGAAATCAACTCATGGAGGAAACCGAAATGTCGGTGTGAATTCCCTTCACAGATCAGAAACAACGAAGCAGGAAGATACATTGGAAAAGCCAAGTAATAAACTTCAAAAAACAGATCAGGGGAAAGAGAGATCCGATGCAAGTTCCCACTTTAGAACTAGCAGTAGTGGATCAGAAGTAACAATGGCATTGGAACCCAGAATTCTTCTTGTTGAGGACAATAAGACTAATATTATGGTGGCTCAGTCCATGATGAAGAAGTTCGGCCAAAAACTCGATGTAGTAACCAACGGAATTGAAGCTGTTCGTGCAGTTCAACAACGTTCTTACGATCTCATTCTCATGGATGTATTCATGCCATTTATGGACGGGCTTGAAGCAACAAGGTTAATCCGTTCATATGAGGAAACAGGGAGCTGGGAGGCAGCTGTAAATGCTGGAGTAGAGCAAACTACACCTTGTCGGACTCCGCCTTCCTCCTCCCGCAACAGGATGCCCATCATTGCTATGACGGCGAATGCATTGTCAGAAAGCGCAGATGAGTGTTATGAAAATGGTATGGATTCGTTCGTATCAAAGCCAATCACCTTCCAAAAGTTAAAACAATGTCTTGATCAATATTTACCACAACCACGACCCTTGTAA 3009 41.31 MVCEMETDVIEDMDIEALSSMWPEDVGPDVRKQFNVERPGADQDMLKEVNIIEEPTIVDFQRLIELTNYTEKGSSQLQYLAKQWEYKQANAVRLIKEELDILSKQKKEVELKKLKILEEHLFEEERYAGDKRPISILEESCDLWQDIPRRKTDLVVQSKRVEIDAEYDTVTYWKQRAMDLEKFLEASLQREQMLSEKLQDNIKNIEKQSSPVEELSQILKRADNFLHFVLQNAPVVFGHQDKELRYRFIYNHFPSLQEEDIIGRTDVEIFSGAGVKESQDFKKEVLEKGLPAKREIQFDTELFGLKTFLIYVEPVFSKAGETIGINYMGMDITDQVVKKREKMAKLREEIAVQKAKESELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQQHLLDVMLSSGDLVLQLINDILDLSKVESGVMKLETTKFRPREVVNHILQTAAASLRKFLVLEGRIADDVPIEVIGDVLRIRQILTNLISNAIKFTHKGKVGIKLYVLPYPPIIGKGEECHKKSTADNSTVPVNGLQEGTCHPAPQNGFCGQKQGDRNHLHCDGPGTPNKSEATMNGNRENKSCSPETTVWIRCDVYDTGIGIPENALPTLFKRYMQASADHARKYGGTGLGLAICKQLVELMGGHLTVTSRENHGSTFTFVLPYKVSTTSSPSEDSDELSDDESTNDEMTEGFFQFQPHSFSSLSSSNGSTRIPNSLLHTSGYPSSTKLNGFAEASYPFPSNNITPQETASLRDASSADATLTSSESQCSSSQINSNLDNEKSTHGGNRNVGVNSLHRSETTKQEDTLEKPSNKLQKTDQGKERSDASSHFRTSSSGSEVTMALEPRILLVEDNKTNIMVAQSMMKKFGQKLDVVTNGIEAVRAVQQRSYDLILMDVFMPFMDGLEATRLIRSYEETGSWEAAVNAGVEQTTPCRTPPSSSRNRMPIIAMTANALSESADECYENGMDSFVSKPITFQKLKQCLDQYLPQPRPL 1002
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 84207514 84215146 + Hsped.01g19370.1 Hepe01g1937 561047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1937 1002 Gene3D - 436 679 IPR036890 -
Hepe01g1937 1002 Pfam His Kinase A (phospho-acceptor) domain 374 437 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Hepe01g1937 1002 Coils Coil 336 363 - -
Hepe01g1937 1002 FunFam Histidine kinase 5 848 997 - -
Hepe01g1937 1002 PRINTS Bacterial sensor protein C-terminal signature 599 613 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Hepe01g1937 1002 PRINTS Bacterial sensor protein C-terminal signature 658 671 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Hepe01g1937 1002 PRINTS Bacterial sensor protein C-terminal signature 634 652 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Hepe01g1937 1002 ProSiteProfiles Histidine kinase domain profile. 379 674 IPR005467 -
Hepe01g1937 1002 MobiDBLite consensus disorder prediction 807 837 - -
Hepe01g1937 1002 MobiDBLite consensus disorder prediction 751 806 - -
Hepe01g1937 1002 SMART HisKA_10 372 437 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Hepe01g1937 1002 Gene3D - 850 996 - -
Hepe01g1937 1002 ProSiteProfiles Response regulatory domain profile. 855 996 IPR001789 GO:0000160(InterPro)
Hepe01g1937 1002 Coils Coil 188 208 - -
Hepe01g1937 1002 SUPERFAMILY CheY-like 854 997 IPR011006 -
Hepe01g1937 1002 CDD REC_hyHK_CKI1_RcsC-like 856 992 - -
Hepe01g1937 1002 Gene3D - 335 435 - -
Hepe01g1937 1002 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 34 997 - GO:0000155(PANTHER)|GO:0005887(PANTHER)|GO:0009927(PANTHER)|GO:0046777(PANTHER)
Hepe01g1937 1002 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 372 437 IPR036097 GO:0000155(InterPro)|GO:0007165(InterPro)
Hepe01g1937 1002 SMART HKATPase_4 483 674 IPR003594 -
Hepe01g1937 1002 SMART REC_2 854 992 IPR001789 GO:0000160(InterPro)
Hepe01g1937 1002 CDD HisKA 371 433 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Hepe01g1937 1002 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 441 672 IPR036890 -
Hepe01g1937 1002 MobiDBLite consensus disorder prediction 751 847 - -
Hepe01g1937 1002 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 597 672 IPR003594 -
Hepe01g1937 1002 Gene3D PAS domain 205 334 - -
Hepe01g1937 1002 Pfam Response regulator receiver domain 856 923 IPR001789 GO:0000160(InterPro)
Hepe01g1937 1002 Coils Coil 92 119 - -
Hepe01g1937 1002 FunFam Histidine kinase 5 213 349 - -
Hepe01g1937 1002 CDD HATPase_EvgS-ArcB-TorS-like 488 671 - -
Hepe01g1937 1002 FunFam Putative histidine kinase 5 360 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1937 Hepe-Chr1:84207514 Hepe03g1107 Hepe-Chr3:63614763 9.31e-41 dispersed
Hepe01g1937 Hepe-Chr1:84207514 Hepe08g0395 Hepe-Chr8:3532040 5.33e-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54877 PF02518 HATPase_c 6.60E-28 CL0025 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1937 - - - 0.0