Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1943 ATGGCGAAAACGGCGTCGTATCGGAAGATCGTATGCAAGTTTTACGTTCTTCTTCTTTTGTTTATTCCGGCTGCGGCGGACTTATCGTTCGGCTTCTACGCTGCCACGTGTCCCGCGGCGGAGTTTATGGTCAGGAACACCGTCAGATCGGCTTCCTCCGTTGACCCCTCTGTCCCCGGCAAGCTCCTCCGATTGCTCTTTCATGACTGTTTCGTTGAGGGATGTGACGCTTCTGTATTGCTCCAAGGAAACGGAACCGAACGAACAGATCCGGGAAATAGGTCACTTGGAGGATTTGAGGTTATTGATTCAGCTAAGAGAGCCCTCGAGTTTTTCTGTCCTGGAACTGTTTCATGTGCCGACGTTGTCGTTTTAGCCGCTAGAGATGCCGTTGAATTTGCCGGTGGGCCCTCAGTCGAAGTCACAACCGGCCGGAGAGATGGAAGAATATCAGCGGCGATAAACGTCCGACCAAACATCGTCGACACAGGCTTTTCAGTGGACCAAATGATGAAACTCTTCACATCAAAAGGGCTGTCGGCGGACGATCTCGTCATCCTCTCTGGGGCCCACACAATCGGAACCGCCCACTGCAGCGCCTTCAGCGACCGCTTCAGAAGAGGCCCAAACGGCCAACAGACCCTCGTCGACGCCTCTCTCGACGGCGCCTACGCCGACGAGCTCATGCGGCGGTGCCCTGCCGGAGCCGCCTCCGGCGTGACCGTCGACAACGATCCGGCAACGGGGAATGTGTTCGACAATCAGTACTACAGAAACATTATGTCGCACAAAGGGCTGTTTCAGTCGGATTCCGTTCTGATCAGCGACGGCCGGACGAGGGCTCAGGTGGAGAGGCTTGCGAAGGATCAGATTGGGTTTTTTGAAAACTGGGCTGAGTCGTTCTTGAAACTTAGTAGCATTGGAGTTAAAAGTGGGGAAGAAGGTGAAATTAGATTGTCTTGTTCTACTAATAATGTTTGA 981 53.31 MAKTASYRKIVCKFYVLLLLFIPAAADLSFGFYAATCPAAEFMVRNTVRSASSVDPSVPGKLLRLLFHDCFVEGCDASVLLQGNGTERTDPGNRSLGGFEVIDSAKRALEFFCPGTVSCADVVVLAARDAVEFAGGPSVEVTTGRRDGRISAAINVRPNIVDTGFSVDQMMKLFTSKGLSADDLVILSGAHTIGTAHCSAFSDRFRRGPNGQQTLVDASLDGAYADELMRRCPAGAASGVTVDNDPATGNVFDNQYYRNIMSHKGLFQSDSVLISDGRTRAQVERLAKDQIGFFENWAESFLKLSSIGVKSGEEGEIRLSCSTNNV 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 84288469 84292207 - Hsped.01g19430.1 Hepe01g1943 561053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1943 326 Gene3D - 31 325 - -
Hepe01g1943 326 FunFam Peroxidase 31 172 - -
Hepe01g1943 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Hepe01g1943 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe01g1943 326 SUPERFAMILY Heme-dependent peroxidases 27 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 FunFam Peroxidase 161 304 - -
Hepe01g1943 326 Pfam Peroxidase 44 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 PANTHER - 17 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe01g1943 326 Gene3D Peroxidase, domain 2 161 304 - -
Hepe01g1943 326 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1943 Hepe-Chr1:84288469 Hepe04g1622 Hepe-Chr4:71616041 1.97e-75 dispersed
Hepe01g1943 Hepe-Chr1:84288469 Hepe02g0183 Hepe-Chr2:1906315 1.30e-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1943 K00430 - csv:101211842 529.25