Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g2041 | ATGTTGAAGAACAAGTCGTCCAAGAACAAGAAGATCGGATTATTAGGGAGATCATTGTCCGGTACCGAGCACGAGCGAGAGATTGAGAATTTAGCCAGAGACGACGGCAGCCAATACAGTCTCACCGGCGGAATCCTCCCGCCGCTCGGTATCAATGGCCGGAATAATCGCAGGGCCAAACTCAGCCCTCATATAATCTCGCCCTTCGATTACAATTACAGAGTTTGGGAGACGTTTCTGATATTTCTTGTATTCTACACGGCCTGGGTTTGCCCGTTTGAGTTCGGATTCATCCCTTCGCCCAGCGGACTTCTTGCTGCTATTGATAATGTTGTAAATGGAATTTTCGCCATTGATATAGTTTTGACATTCTTCGTCGCATATTTGGACAAATCTTCTTACCTGCTCGTCGATGACCGTAAGCTGATTGCTCTGCGTTATGCCAAAACCTGGTTGGTCCTCGACCTCATCTCCATTGTTCCATCGGAATTGGCTCGCAGACTTCTCCCTCCTCCTCTTCAGGCTTATGGCTACTTCAATATGCTTCGTCTTTGGCGTCTTCGCCGAGTCAGTGCCATGTTCGCCAGGTTGGAAAAGGACAGGAACTACAACTATTTCTGGGTTCGATCCGCAAAGCTTATATTTGTATGTATGTTTTCAGCTCATTTTGCTGGGTGCTGCTTCTATTTAATTGCTTCAAACTATAAGGACCCAACAAAGGTATGGTTGACCTTATACATGCAAGACTTTCATAAAGAAACTTTGTGGCAACGTTATGTAGCTTCCATTTACTGGTCAATTGTCACACTCACAACCACTGGCTATGGCGATTTGCATCCTGTAAATGATCAAGAGATGGTATTTGTCATCTTTTATCTCTTCTTTATTCTCGGCTTGCAAGCTTACCTCATTGGAAATATGACTAACTTGGTCGTCCATGGAACCAGTCGAACCAGAAAATTTAGGGACACCATACAAGCTGCTTCAAATTTCGCCCAAAGAAACCAACTACCTGTTCGACTGCAAGAACAGATGATTGCTCATCTGTGTTTGAAATTCAGGACTGATTCAGAGGGATTACAACAGCAAGAAACAGTTGAATCCCTTCCAAAAGCCATTAGATCTAGCATCTCCTACCATCTCTTCTATTCACTTGTTGATAGTGCTTATTTGTTTAATGGAGTCTCGAGCGACTTGATTTTTCAACTGGTAACAGAAATGAAGGCTGAGTACTTCCCTCCCAAAGAAGACATTATCTTGCAGAATGAAGCACCATCAGATTTCTATATAGTTGTCACCGGCGCTGCGGATCTTATTGTACAAAGAAACGGAATAGAAGAGATCGCTGGTGAAGCAAGGACAGGAGATGTCATTGGCGAGATAGGCGTGCTTTGTTATCAACCGCAATTGTTTACAGTTCGAACCAGCCGTTTGAGTCAATTGTTACGTTTGAATCGCACTTCGTTTTTTAACTTAGTACAATCAAGTGTTGGGGATGGGGCAATTATAATGAACAATCTCCTTAAGCACCTGAAGGAGATAAAAGACCCCATGATGGAGGAAATTCTGCAAGAAACAGAACAGACATTGACTCGGGCTGGAATGGAAATGCCTCCCAATATATACTGCGCAGCAGACAGTGGCGACGACTTATTGTTGCATCAGTTGCTAAAGCGGGGTTCGAATCCAAATGAGGCAGATGGAAGTAATGGGAAGACAGCACTCCATACTGCAGCAGCTAAAGGAAACGAACACTGCATAGTTCTACTCCTAGAGTATGGGGCAGACCCGAACCGAAGAGATTTTGAAGGAAACGTTCCCCTATGGCAAGCAATACAAGGGAAGCATGAGTCTATAGTTAAGCTTCTAGTGGACAACGGTGCCGTTATTGCTTCAGGCGACGTTGCCCAGTTTGCATGCACTGCTGCGGAGCAAAACAGCATAGATATGCTCAAATCCCTCATCCAATGTGGTGGAAACGTAACGCTGCCGAGAAGCAACGGGACTACGGCTCTTCACTTGGCAGTATGTGAAGCAAACAGTGAAATGGTTAAGTTCCTTATAGAGCAAGGGGCTGACATTGATAAGCCAGATGTTAATGGATGGACTCCTCGAGCATTGGCAGATCATCAAGGCCATGAAGAGATAAAAGAAATATTCTCTAAGCAAGATGTGAATAAATCATCTGTTATCCATATTCCACAAAATCCCGATTCAACTTACATACGGAAGTTCCAGAGCGAGTGTAACATGCCACGGTTTTCGCAAGACTCCTGCGTGACTCCTGTTCGAGAATCAAATTGTTCTGATATGCTTCCTAGAAGGAGAAGAAGCACTAATTATCAAAACTCGCTAGTTGGGTTCATGGCAACTATCAATGCCGGTGAAAGGGACGTTCCACAACCCGCATCACTCGGTTTGAGCACGAGAGTGGGTTACCAGGCAAGAATTATTCTCAGTTGCCCTGAAAAGGAAGAAATTGCTGGAAAGCTTGTGCTTTTACCCAAATCCATCCAAGAACTACTTGAAATTGGTGCCCAGAAGTTTGGGATTTCTGTAACAAAGATTTTAACTCAAGAACGAGCTGAAGTTGAGGATATAGACCTTATCAGAGACGGCGATCACCTCCTTCTTGTTGGCAATCCCCAGTAG | 2652 | 44.27 | MLKNKSSKNKKIGLLGRSLSGTEHEREIENLARDDGSQYSLTGGILPPLGINGRNNRRAKLSPHIISPFDYNYRVWETFLIFLVFYTAWVCPFEFGFIPSPSGLLAAIDNVVNGIFAIDIVLTFFVAYLDKSSYLLVDDRKLIALRYAKTWLVLDLISIVPSELARRLLPPPLQAYGYFNMLRLWRLRRVSAMFARLEKDRNYNYFWVRSAKLIFVCMFSAHFAGCCFYLIASNYKDPTKVWLTLYMQDFHKETLWQRYVASIYWSIVTLTTTGYGDLHPVNDQEMVFVIFYLFFILGLQAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAQRNQLPVRLQEQMIAHLCLKFRTDSEGLQQQETVESLPKAIRSSISYHLFYSLVDSAYLFNGVSSDLIFQLVTEMKAEYFPPKEDIILQNEAPSDFYIVVTGAADLIVQRNGIEEIAGEARTGDVIGEIGVLCYQPQLFTVRTSRLSQLLRLNRTSFFNLVQSSVGDGAIIMNNLLKHLKEIKDPMMEEILQETEQTLTRAGMEMPPNIYCAADSGDDLLLHQLLKRGSNPNEADGSNGKTALHTAAAKGNEHCIVLLLEYGADPNRRDFEGNVPLWQAIQGKHESIVKLLVDNGAVIASGDVAQFACTAAEQNSIDMLKSLIQCGGNVTLPRSNGTTALHLAVCEANSEMVKFLIEQGADIDKPDVNGWTPRALADHQGHEEIKEIFSKQDVNKSSVIHIPQNPDSTYIRKFQSECNMPRFSQDSCVTPVRESNCSDMLPRRRRSTNYQNSLVGFMATINAGERDVPQPASLGLSTRVGYQARIILSCPEKEEIAGKLVLLPKSIQELLEIGAQKFGISVTKILTQERAEVEDIDLIRDGDHLLLVGNPQ | 883 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 85082695 | 85089059 | + | Hsped.01g20410.1 | Hepe01g2041 | 561151 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g2041 | 883 | Gene3D | Jelly Rolls | 355 | 518 | IPR014710 | - | |
| Hepe01g2041 | 883 | PANTHER | POTASSIUM CHANNEL AKT1 | 31 | 877 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) | |
| Hepe01g2041 | 883 | Gene3D | - | 538 | 722 | IPR036770 | - | |
| Hepe01g2041 | 883 | SUPERFAMILY | Ankyrin repeat | 541 | 723 | IPR036770 | - | |
| Hepe01g2041 | 883 | ProSiteProfiles | Ankyrin repeat profile. | 667 | 699 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | SUPERFAMILY | Voltage-gated potassium channels | 68 | 312 | - | - | |
| Hepe01g2041 | 883 | SUPERFAMILY | cAMP-binding domain-like | 316 | 511 | IPR018490 | - | |
| Hepe01g2041 | 883 | Gene3D | - | 73 | 312 | - | - | |
| Hepe01g2041 | 883 | ProSiteProfiles | KHA domain profile. | 816 | 883 | IPR021789 | - | |
| Hepe01g2041 | 883 | ProSiteProfiles | Ankyrin repeat region circular profile. | 603 | 628 | - | - | |
| Hepe01g2041 | 883 | PRINTS | EAG/ELK/ERG potassium channel family signature | 109 | 119 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe01g2041 | 883 | PRINTS | EAG/ELK/ERG potassium channel family signature | 259 | 276 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe01g2041 | 883 | PRINTS | EAG/ELK/ERG potassium channel family signature | 86 | 93 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe01g2041 | 883 | PRINTS | EAG/ELK/ERG potassium channel family signature | 303 | 312 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe01g2041 | 883 | PRINTS | EAG/ELK/ERG potassium channel family signature | 120 | 129 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Hepe01g2041 | 883 | Pfam | KHA, dimerisation domain of potassium ion channel | 816 | 878 | IPR021789 | - | |
| Hepe01g2041 | 883 | FunFam | Potassium channel KAT2 | 379 | 515 | - | - | |
| Hepe01g2041 | 883 | Pfam | Cyclic nucleotide-binding domain | 410 | 495 | IPR000595 | - | |
| Hepe01g2041 | 883 | ProSiteProfiles | Ankyrin repeat profile. | 570 | 602 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | ProSiteProfiles | Ankyrin repeat region circular profile. | 667 | 698 | - | - | |
| Hepe01g2041 | 883 | Pfam | Ankyrin repeats (3 copies) | 543 | 630 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | Pfam | Ankyrin repeats (3 copies) | 641 | 726 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | ProSiteProfiles | Ankyrin repeat profile. | 603 | 635 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | ProSiteProfiles | Ankyrin repeat region circular profile. | 570 | 601 | - | - | |
| Hepe01g2041 | 883 | CDD | CAP_ED | 391 | 504 | IPR000595 | - | |
| Hepe01g2041 | 883 | SMART | cnmp_10 | 391 | 508 | IPR000595 | - | |
| Hepe01g2041 | 883 | SMART | ANK_2a | 536 | 565 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | SMART | ANK_2a | 570 | 599 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | SMART | ANK_2a | 667 | 696 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | SMART | ANK_2a | 603 | 632 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | SMART | ANK_2a | 634 | 663 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 391 | 493 | IPR000595 | - | |
| Hepe01g2041 | 883 | Pfam | Ion transport protein | 73 | 318 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe01g2041 | 883 | PRINTS | Ankyrin repeat signature | 683 | 697 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | PRINTS | Ankyrin repeat signature | 571 | 586 | IPR002110 | GO:0005515(InterPro) | |
| Hepe01g2041 | 883 | FunFam | Potassium channel KAT3 | 75 | 313 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g2041 | Hepe-Chr1:85082695 | Hepe07g1794 | Hepe-Chr7:60604530 | 9.57e-180 | dispersed | |
| Hepe01g2041 | Hepe-Chr1:85082695 | Hepe09g0689 | Hepe-Chr9:6524761 | 0.0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g2041 | K21867 | - | csv:101217334 | 1357.04 |