Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2041 ATGTTGAAGAACAAGTCGTCCAAGAACAAGAAGATCGGATTATTAGGGAGATCATTGTCCGGTACCGAGCACGAGCGAGAGATTGAGAATTTAGCCAGAGACGACGGCAGCCAATACAGTCTCACCGGCGGAATCCTCCCGCCGCTCGGTATCAATGGCCGGAATAATCGCAGGGCCAAACTCAGCCCTCATATAATCTCGCCCTTCGATTACAATTACAGAGTTTGGGAGACGTTTCTGATATTTCTTGTATTCTACACGGCCTGGGTTTGCCCGTTTGAGTTCGGATTCATCCCTTCGCCCAGCGGACTTCTTGCTGCTATTGATAATGTTGTAAATGGAATTTTCGCCATTGATATAGTTTTGACATTCTTCGTCGCATATTTGGACAAATCTTCTTACCTGCTCGTCGATGACCGTAAGCTGATTGCTCTGCGTTATGCCAAAACCTGGTTGGTCCTCGACCTCATCTCCATTGTTCCATCGGAATTGGCTCGCAGACTTCTCCCTCCTCCTCTTCAGGCTTATGGCTACTTCAATATGCTTCGTCTTTGGCGTCTTCGCCGAGTCAGTGCCATGTTCGCCAGGTTGGAAAAGGACAGGAACTACAACTATTTCTGGGTTCGATCCGCAAAGCTTATATTTGTATGTATGTTTTCAGCTCATTTTGCTGGGTGCTGCTTCTATTTAATTGCTTCAAACTATAAGGACCCAACAAAGGTATGGTTGACCTTATACATGCAAGACTTTCATAAAGAAACTTTGTGGCAACGTTATGTAGCTTCCATTTACTGGTCAATTGTCACACTCACAACCACTGGCTATGGCGATTTGCATCCTGTAAATGATCAAGAGATGGTATTTGTCATCTTTTATCTCTTCTTTATTCTCGGCTTGCAAGCTTACCTCATTGGAAATATGACTAACTTGGTCGTCCATGGAACCAGTCGAACCAGAAAATTTAGGGACACCATACAAGCTGCTTCAAATTTCGCCCAAAGAAACCAACTACCTGTTCGACTGCAAGAACAGATGATTGCTCATCTGTGTTTGAAATTCAGGACTGATTCAGAGGGATTACAACAGCAAGAAACAGTTGAATCCCTTCCAAAAGCCATTAGATCTAGCATCTCCTACCATCTCTTCTATTCACTTGTTGATAGTGCTTATTTGTTTAATGGAGTCTCGAGCGACTTGATTTTTCAACTGGTAACAGAAATGAAGGCTGAGTACTTCCCTCCCAAAGAAGACATTATCTTGCAGAATGAAGCACCATCAGATTTCTATATAGTTGTCACCGGCGCTGCGGATCTTATTGTACAAAGAAACGGAATAGAAGAGATCGCTGGTGAAGCAAGGACAGGAGATGTCATTGGCGAGATAGGCGTGCTTTGTTATCAACCGCAATTGTTTACAGTTCGAACCAGCCGTTTGAGTCAATTGTTACGTTTGAATCGCACTTCGTTTTTTAACTTAGTACAATCAAGTGTTGGGGATGGGGCAATTATAATGAACAATCTCCTTAAGCACCTGAAGGAGATAAAAGACCCCATGATGGAGGAAATTCTGCAAGAAACAGAACAGACATTGACTCGGGCTGGAATGGAAATGCCTCCCAATATATACTGCGCAGCAGACAGTGGCGACGACTTATTGTTGCATCAGTTGCTAAAGCGGGGTTCGAATCCAAATGAGGCAGATGGAAGTAATGGGAAGACAGCACTCCATACTGCAGCAGCTAAAGGAAACGAACACTGCATAGTTCTACTCCTAGAGTATGGGGCAGACCCGAACCGAAGAGATTTTGAAGGAAACGTTCCCCTATGGCAAGCAATACAAGGGAAGCATGAGTCTATAGTTAAGCTTCTAGTGGACAACGGTGCCGTTATTGCTTCAGGCGACGTTGCCCAGTTTGCATGCACTGCTGCGGAGCAAAACAGCATAGATATGCTCAAATCCCTCATCCAATGTGGTGGAAACGTAACGCTGCCGAGAAGCAACGGGACTACGGCTCTTCACTTGGCAGTATGTGAAGCAAACAGTGAAATGGTTAAGTTCCTTATAGAGCAAGGGGCTGACATTGATAAGCCAGATGTTAATGGATGGACTCCTCGAGCATTGGCAGATCATCAAGGCCATGAAGAGATAAAAGAAATATTCTCTAAGCAAGATGTGAATAAATCATCTGTTATCCATATTCCACAAAATCCCGATTCAACTTACATACGGAAGTTCCAGAGCGAGTGTAACATGCCACGGTTTTCGCAAGACTCCTGCGTGACTCCTGTTCGAGAATCAAATTGTTCTGATATGCTTCCTAGAAGGAGAAGAAGCACTAATTATCAAAACTCGCTAGTTGGGTTCATGGCAACTATCAATGCCGGTGAAAGGGACGTTCCACAACCCGCATCACTCGGTTTGAGCACGAGAGTGGGTTACCAGGCAAGAATTATTCTCAGTTGCCCTGAAAAGGAAGAAATTGCTGGAAAGCTTGTGCTTTTACCCAAATCCATCCAAGAACTACTTGAAATTGGTGCCCAGAAGTTTGGGATTTCTGTAACAAAGATTTTAACTCAAGAACGAGCTGAAGTTGAGGATATAGACCTTATCAGAGACGGCGATCACCTCCTTCTTGTTGGCAATCCCCAGTAG 2652 44.27 MLKNKSSKNKKIGLLGRSLSGTEHEREIENLARDDGSQYSLTGGILPPLGINGRNNRRAKLSPHIISPFDYNYRVWETFLIFLVFYTAWVCPFEFGFIPSPSGLLAAIDNVVNGIFAIDIVLTFFVAYLDKSSYLLVDDRKLIALRYAKTWLVLDLISIVPSELARRLLPPPLQAYGYFNMLRLWRLRRVSAMFARLEKDRNYNYFWVRSAKLIFVCMFSAHFAGCCFYLIASNYKDPTKVWLTLYMQDFHKETLWQRYVASIYWSIVTLTTTGYGDLHPVNDQEMVFVIFYLFFILGLQAYLIGNMTNLVVHGTSRTRKFRDTIQAASNFAQRNQLPVRLQEQMIAHLCLKFRTDSEGLQQQETVESLPKAIRSSISYHLFYSLVDSAYLFNGVSSDLIFQLVTEMKAEYFPPKEDIILQNEAPSDFYIVVTGAADLIVQRNGIEEIAGEARTGDVIGEIGVLCYQPQLFTVRTSRLSQLLRLNRTSFFNLVQSSVGDGAIIMNNLLKHLKEIKDPMMEEILQETEQTLTRAGMEMPPNIYCAADSGDDLLLHQLLKRGSNPNEADGSNGKTALHTAAAKGNEHCIVLLLEYGADPNRRDFEGNVPLWQAIQGKHESIVKLLVDNGAVIASGDVAQFACTAAEQNSIDMLKSLIQCGGNVTLPRSNGTTALHLAVCEANSEMVKFLIEQGADIDKPDVNGWTPRALADHQGHEEIKEIFSKQDVNKSSVIHIPQNPDSTYIRKFQSECNMPRFSQDSCVTPVRESNCSDMLPRRRRSTNYQNSLVGFMATINAGERDVPQPASLGLSTRVGYQARIILSCPEKEEIAGKLVLLPKSIQELLEIGAQKFGISVTKILTQERAEVEDIDLIRDGDHLLLVGNPQ 883
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 85082695 85089059 + Hsped.01g20410.1 Hepe01g2041 561151
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2041 883 Gene3D Jelly Rolls 355 518 IPR014710 -
Hepe01g2041 883 PANTHER POTASSIUM CHANNEL AKT1 31 877 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Hepe01g2041 883 Gene3D - 538 722 IPR036770 -
Hepe01g2041 883 SUPERFAMILY Ankyrin repeat 541 723 IPR036770 -
Hepe01g2041 883 ProSiteProfiles Ankyrin repeat profile. 667 699 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 SUPERFAMILY Voltage-gated potassium channels 68 312 - -
Hepe01g2041 883 SUPERFAMILY cAMP-binding domain-like 316 511 IPR018490 -
Hepe01g2041 883 Gene3D - 73 312 - -
Hepe01g2041 883 ProSiteProfiles KHA domain profile. 816 883 IPR021789 -
Hepe01g2041 883 ProSiteProfiles Ankyrin repeat region circular profile. 603 628 - -
Hepe01g2041 883 PRINTS EAG/ELK/ERG potassium channel family signature 109 119 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe01g2041 883 PRINTS EAG/ELK/ERG potassium channel family signature 259 276 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe01g2041 883 PRINTS EAG/ELK/ERG potassium channel family signature 86 93 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe01g2041 883 PRINTS EAG/ELK/ERG potassium channel family signature 303 312 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe01g2041 883 PRINTS EAG/ELK/ERG potassium channel family signature 120 129 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe01g2041 883 Pfam KHA, dimerisation domain of potassium ion channel 816 878 IPR021789 -
Hepe01g2041 883 FunFam Potassium channel KAT2 379 515 - -
Hepe01g2041 883 Pfam Cyclic nucleotide-binding domain 410 495 IPR000595 -
Hepe01g2041 883 ProSiteProfiles Ankyrin repeat profile. 570 602 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 ProSiteProfiles Ankyrin repeat region circular profile. 667 698 - -
Hepe01g2041 883 Pfam Ankyrin repeats (3 copies) 543 630 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 Pfam Ankyrin repeats (3 copies) 641 726 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 ProSiteProfiles Ankyrin repeat profile. 603 635 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 ProSiteProfiles Ankyrin repeat region circular profile. 570 601 - -
Hepe01g2041 883 CDD CAP_ED 391 504 IPR000595 -
Hepe01g2041 883 SMART cnmp_10 391 508 IPR000595 -
Hepe01g2041 883 SMART ANK_2a 536 565 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 SMART ANK_2a 570 599 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 SMART ANK_2a 667 696 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 SMART ANK_2a 603 632 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 SMART ANK_2a 634 663 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 ProSiteProfiles cAMP/cGMP binding motif profile. 391 493 IPR000595 -
Hepe01g2041 883 Pfam Ion transport protein 73 318 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g2041 883 PRINTS Ankyrin repeat signature 683 697 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 PRINTS Ankyrin repeat signature 571 586 IPR002110 GO:0005515(InterPro)
Hepe01g2041 883 FunFam Potassium channel KAT3 75 313 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2041 Hepe-Chr1:85082695 Hepe07g1794 Hepe-Chr7:60604530 9.57e-180 dispersed
Hepe01g2041 Hepe-Chr1:85082695 Hepe09g0689 Hepe-Chr9:6524761 0.0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2041 K21867 - csv:101217334 1357.04