Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g2047 | ATGAGTAGGGAAAATGTTGATTTTCAAGTTGAAGAGTGCTCTGGCAGAATCACGAGGGCACGGGCGAAAGAGCTAAGCGAATCAGGAGGCATTCTATGCTCCTCAAAATCTTCTGGAGGTCAGAATCAGAAGCACACTGTACGAGCTAACTCAAAAAGAATGGCACCTGATGAGATTAAGACTTGTTCAGTTTCTTCCAATGGCCTTCCTAATAAAAGGAGAGCAGTGCTCAAGGATGTGACTAACATTTCCACCAAAGGTTCTGATAAGAATTGCAACAATGCTTCTAATATTCAGGGTGCCAAACAATCTAGAAGAGTTTCTGCAAAAGCTAAGGCAAATGTGCCTTTAAATGTTTCTGTAGAAATTCTAGGAGCAGAAGAAGATGCAAACACTAGACTAGCCGATGATTTATCTAAAATAAGGGTGGTAGAATCACGAGAGGCCTCTTTACGAGAAACTTTGGACGAAAAAGAGAAAACAATGCAAACTATGTGTCACACCAGCAGAGAATGTGGAGTTTCAGATATGATTCTCTCTGTATCTTCAGAAGAATCTATCCCTCGGCCAAATGAAAAATATATGGCACCTGAACAATCGGGAACATCAAATGATAGAGGTATTATAGACATTGATTCAAACTCAAAATGTCTTCAATCATGCAGCATATATGCTCCAGACATATATGACAGGATACGCGTGACAGAGCTTGATCAAAGGGCCTCAACTAACTATATGGAACAGTTGCAGCAAGATATCACTGCAAACATGCGAGGAATACTGGTTGATTGGCTTGTAGAGGTATCTGAAGAATATAAGTTGGTTCCAGATACACTTTATCTCACTGTAAATGTTATTGATCGGTTTCTCGCTCAAAATCATATGGAAAAAAAGCGTCTTCAACTCCTCGGCATTGCAAGCATGCTAATCGCATCAAAATATGAGGAGATCTGTGCACCGCGGGTGGAAGATTTCTGCTTCATTACAGATAATACTTACACAAAAGGAGAGGTAGTAGCAATGGAGAGTGAAGTTTTGAACTTACTGCACTTTCGGCTATCTGTGCCCACTACAAAGACATTTCTGAGGAGATTCATACAATCAGCTCATGCTTCTTACAAGGTTCCTTGCATTGAACTTGAGTTTTTGGCCAATTATTTAGCTGAGTTGACTCTTGTTGAATACAGCTTCCTAAAGTTCCTTCCTTCTCTGATAGCCGCATCAGCCGTATTTCTTGCGAAATGGACACTTGACCAATCGGATCATCCATGGAATCCAACTCTAGAGCACTATACCAGTTACAACGTTAAAGAGCTTAAAACTGCAGTGCTTGCCCTCCAAGACTTGCAACTTAACACAAGTGGTTCCTCGCTAAATTCCATACGTCAAAAGTATAGACAATCGAAGTTCAAAGGCGTAGCGACATTATCATCAACTCGATCGATTCTATCACTATTTTGA | 1461 | 40.52 | MSRENVDFQVEECSGRITRARAKELSESGGILCSSKSSGGQNQKHTVRANSKRMAPDEIKTCSVSSNGLPNKRRAVLKDVTNISTKGSDKNCNNASNIQGAKQSRRVSAKAKANVPLNVSVEILGAEEDANTRLADDLSKIRVVESREASLRETLDEKEKTMQTMCHTSRECGVSDMILSVSSEESIPRPNEKYMAPEQSGTSNDRGIIDIDSNSKCLQSCSIYAPDIYDRIRVTELDQRASTNYMEQLQQDITANMRGILVDWLVEVSEEYKLVPDTLYLTVNVIDRFLAQNHMEKKRLQLLGIASMLIASKYEEICAPRVEDFCFITDNTYTKGEVVAMESEVLNLLHFRLSVPTTKTFLRRFIQSAHASYKVPCIELEFLANYLAELTLVEYSFLKFLPSLIAASAVFLAKWTLDQSDHPWNPTLEHYTSYNVKELKTAVLALQDLQLNTSGSSLNSIRQKYRQSKFKGVATLSSTRSILSLF | 486 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 85134402 | 85141815 | + | Hsped.01g20470.1 | Hepe01g2047 | 561157 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g2047 | 486 | Gene3D | - | 227 | 475 | - | - | |
Hepe01g2047 | 486 | MobiDBLite | consensus disorder prediction | 185 | 207 | - | - | |
Hepe01g2047 | 486 | SUPERFAMILY | Cyclin-like | 219 | 353 | IPR036915 | - | |
Hepe01g2047 | 486 | ProSitePatterns | Cyclins signature. | 258 | 289 | IPR048258 | - | |
Hepe01g2047 | 486 | Pfam | Cyclin, N-terminal domain | 227 | 354 | IPR006671 | - | |
Hepe01g2047 | 486 | PIRSF | Cyclin_A_B_D_E | 33 | 485 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Hepe01g2047 | 486 | MobiDBLite | consensus disorder prediction | 30 | 49 | - | - | |
Hepe01g2047 | 486 | Pfam | Cyclin, C-terminal domain | 356 | 478 | IPR004367 | - | |
Hepe01g2047 | 486 | SMART | cyclin_7 | 360 | 448 | IPR013763 | - | |
Hepe01g2047 | 486 | SMART | cyclin_7 | 263 | 347 | IPR013763 | - | |
Hepe01g2047 | 486 | FunFam | Cyclin A1 | 343 | 475 | - | - | |
Hepe01g2047 | 486 | SUPERFAMILY | Cyclin-like | 355 | 478 | IPR036915 | - | |
Hepe01g2047 | 486 | SMART | Cyclin_C_2 | 356 | 479 | IPR004367 | - | |
Hepe01g2047 | 486 | FunFam | Mitotic cyclin 6 | 241 | 341 | - | - | |
Hepe01g2047 | 486 | Coils | Coil | 141 | 161 | - | - | |
Hepe01g2047 | 486 | Gene3D | - | 241 | 354 | - | - | |
Hepe01g2047 | 486 | CDD | CYCLIN_AtCycA-like_rpt2 | 356 | 470 | - | - | |
Hepe01g2047 | 486 | PANTHER | CYCLINS | 205 | 466 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Hepe01g2047 | 486 | MobiDBLite | consensus disorder prediction | 29 | 56 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2047 | Hepe-Chr1:85134402 | Hepe03g1583 | Hepe-Chr3:72721886 | 5.08e-135 | dispersed | |
Hepe01g2338 | Hepe-Chr1:87913705 | Hepe01g2047 | Hepe-Chr1:85134402 | 9.72e-52 | transposed | |
Hepe02g0012 | Hepe-Chr2:280260 | Hepe01g2047 | Hepe-Chr1:85134402 | 1.11e-42 | transposed | |
Hepe04g0519 | Hepe-Chr4:57680920 | Hepe01g2047 | Hepe-Chr1:85134402 | 1.63e-47 | transposed | |
Hepe04g1666 | Hepe-Chr4:71896627 | Hepe01g2047 | Hepe-Chr1:85134402 | 3.99e-49 | transposed | |
Hepe01g2047 | Hepe-Chr1:85134402 | Hepe10g0294 | Hepe-Chr10:3124022 | 2.14e-136 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g2047 | K06627 | - | csv:101204275 | 823.157 |