Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g2078 | ATGGGCTGGGACTCCGGCCCGAAACCGTCACAGGCCCATAAATTTATCCCTATGGGCCAGCCCAAATGTAAATGGGCCGTAACCCGTCAACAAAGTGGACTCTCGGAGCCTACCTCTATAAATCCTCTTCGCTCCGTTTCGCATTCGGCATCTGAGGAAGAAGAAAGTAGAACTGTAGAAGAAGAGGAACCTGAATTCGAAGCTCGAGCTCGAGCTCATACCTGTACCGATACACGAAGATTCTCCGATTGCTTGTCTTCCCCGCTTCGTCCAGGTGAAGAATGGAGAAATGTATATGCAGCTCATGATCAGAGTTGGAAGTGTTTGTACTTCTTGATTTTCATACATTTGGTTGGTTGCTTGAAGTTGCGAAGCCGAATAATGCCTCGTAAGGTGAACCATGGGTTAGATTACGATGAAGATTACGACGAGTACGACGATTATGATTATTACGAAAACGATTTCGACGTAGAAGAAAAAGAAAAAACACCTGTGGCTAAGGAAGAAACAAAGGGGCATAAGCTTTGGCGATGTCCGATTTGCACTTACGACAATGAAGACAGTTTTTCTGCTTGTGATATATGTGGCGTTCTGCGCAACCCTTTGGTCAACAAGAGCAATACTTTTGATGACAGAACAGTTGAGAACATCTGCAAAGACTCTGGAGTATCCATAATGGCCAAGTCTCTCTTTGCATCGTCGCCAAATCAAATACCCGAAAGGGCTGTAAAATTTCAAGAGCAGGGCGATAAATTTGAGAAGGAAAGAGAAGATAACATCCACAAGATTGGGAATATCCGGGGCCATTCGCATGAATTCCATAATGCTTCTAGTACCTGTAGTCATTTCTGTACAAATATAGTCCCTTTCGAGTTTGATATTCCATCCCCAGATGATGTCGTTTCTAATGGATTGCGTTCCTCCAAAGTTGGTTTAAAAGCAGTCAGCCACAACGATTTCAACTCTTCAGTATTATCTACAGACATCACTAAGAAAGGTGCAAATAATGCAGCATCTTCAAAAAGTGCATATAGCTCGTCTGCTGTATTGCCAACGGGCAAATTAGGCAGTATAGGAGGAACACAGTTTAGTACCAAAAGTTCAGACAGCTCAGGCACCTCAATTGGAAAAAGTACAGTGGTCATTCAAGAGCACAATAGGTCAATGAGTGTAACAACAAACTTACAATCACGTGATAACAGGTCATCAAGCACTTCCACATCAAAGTCAGGAGGCAAATTTGACAGCATGGATGAGAGCAGTAACTCTTCTGTGGATAGGGAAAAGCCCCAAAGTATTGCTGGTAGTTTGAACAAAATGGTTCTAAATGTCAATTCTGCCTATGCAAATTATATTAGTGGGCTAGGAAAAACATCAAATGTTCAGTATAAGCATGATAAATGGATGCTACCTGACAAAGCTGTAGATACTTTGACTCAGCTGAATCTTGCTATAGTTGGTCATGTTGATTCTGGAAAATCTACTCTCTCAGGAAGACTTTTGCACCTATTGGGACGTGTGTCCCAAAAAGAAATGCACAAATATGAAAAAGAAGCAAAGTCCTTGGGCAAGGGTTCCTTTGCTTATGCCTGGGCACTGGATGAGAGTGCAGAAGAAAGAGAGAGAGGAATAACTATGACTGTCGGTGTTGCTTATTTTGATTCTAAAAGGTATCATGTTGTTGTGCTCGATTCCCCAGGCCATAAAGATTTTGTTCCAAACATGATATCTGGGGCAACACAAGCTGATGCCGCAGTTCTAGTTATAGATGCATCTGTTGGTGCATTTGAAGCTGGTATGGACGGTTCGAAGGGGCAGACAAGGGAACATGTGCAATTAATCAGGAGCTTTGGTGTAGATCAGATTATTGTTGCAGTTAACAAAATGGATGTGGTGGAGTATTCCAAAGAGCGCTATGAATTTATTAAGCTGCAACTTGGAACATTTTTTCGTTCTTGTGGTTATAAAGATTCATCATTGTCTTGGATTCCATTGAGTGCCATGGCAAATCAAAATCTGGTGACTGCCCCGTCTGATGTTCAAATTTTGTCCTGGTATCGTGGACCTAATCTTTTGGAGGCAATCGATTCCCTACAATCACCCACTAGAGATTTCTCAAAGCCACTGCTTATGCCGATATGCGACGTTATTAGATCAATTTCACTTGGTCAAGTGTCTGCCTGTGGCAAACTGGAAGCTGGAGCTCTCCAGTCTGGATCCAAGGTTCTTGTCATGCCATCTGGAGAAAGAGGCACTGTGCGCAGTTTAGAACGCAATTCTAAGGCTTGCAAAATTGCAAGAGCAGGGGACAACGTGACTGTTAGTCTACAAGGAGTTGAAACAAGTAGCGTGCTGGCTGGGGGTGTCCTATGTCATCCTGATTTTCCTGTTGCTATTGCAAAACACTTGGAATTGAAGATTCTCACTTTGGAGCTTGCAACACCGATATTAATAGGATCTCAGGTTGAAATTCATATACACCATGTGAAGGAGGCTGCTAGAGTTTCAAGGATAGTGTCGTTGCTTGATGCGAAGACGGGAAAGGTTGCGAAGAAGGCACCGCGTTGTCTCAGTGCTAAACAAAGTGCAGTCATTGAGGTTGTTTTGCAAAGTCCAGTTTGTGTGGAAGCATTCTCGACTAGTCGAGCTCTCGGGCGGGTATTTCTGAGATCAATGGGCAGAACTATAGCCGTCGGCATCATCACCCAACTAATCGGAGTTCCTGAATAA | 2730 | 43.19 | MGWDSGPKPSQAHKFIPMGQPKCKWAVTRQQSGLSEPTSINPLRSVSHSASEEEESRTVEEEEPEFEARARAHTCTDTRRFSDCLSSPLRPGEEWRNVYAAHDQSWKCLYFLIFIHLVGCLKLRSRIMPRKVNHGLDYDEDYDEYDDYDYYENDFDVEEKEKTPVAKEETKGHKLWRCPICTYDNEDSFSACDICGVLRNPLVNKSNTFDDRTVENICKDSGVSIMAKSLFASSPNQIPERAVKFQEQGDKFEKEREDNIHKIGNIRGHSHEFHNASSTCSHFCTNIVPFEFDIPSPDDVVSNGLRSSKVGLKAVSHNDFNSSVLSTDITKKGANNAASSKSAYSSSAVLPTGKLGSIGGTQFSTKSSDSSGTSIGKSTVVIQEHNRSMSVTTNLQSRDNRSSSTSTSKSGGKFDSMDESSNSSVDREKPQSIAGSLNKMVLNVNSAYANYISGLGKTSNVQYKHDKWMLPDKAVDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRVSQKEMHKYEKEAKSLGKGSFAYAWALDESAEERERGITMTVGVAYFDSKRYHVVVLDSPGHKDFVPNMISGATQADAAVLVIDASVGAFEAGMDGSKGQTREHVQLIRSFGVDQIIVAVNKMDVVEYSKERYEFIKLQLGTFFRSCGYKDSSLSWIPLSAMANQNLVTAPSDVQILSWYRGPNLLEAIDSLQSPTRDFSKPLLMPICDVIRSISLGQVSACGKLEAGALQSGSKVLVMPSGERGTVRSLERNSKACKIARAGDNVTVSLQGVETSSVLAGGVLCHPDFPVAIAKHLELKILTLELATPILIGSQVEIHIHHVKEAARVSRIVSLLDAKTGKVAKKAPRCLSAKQSAVIEVVLQSPVCVEAFSTSRALGRVFLRSMGRTIAVGIITQLIGVPE | 909 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 85434778 | 85442430 | + | Hsped.01g20780.1 | Hepe01g2078 | 561188 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g2078 | 909 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 801 | 905 | IPR009001 | - | |
Hepe01g2078 | 909 | CDD | EF1_alpha | 482 | 701 | - | - | |
Hepe01g2078 | 909 | PANTHER | TRANSLATION FACTOR | 479 | 902 | IPR050100 | GO:0003924(PANTHER)|GO:0006412(PANTHER) | |
Hepe01g2078 | 909 | Gene3D | Translation factors | 706 | 795 | - | - | |
Hepe01g2078 | 909 | Pfam | GTP-eEF1A C-terminal domain-like | 803 | 902 | IPR054696 | - | |
Hepe01g2078 | 909 | Gene3D | - | 471 | 703 | IPR027417 | - | |
Hepe01g2078 | 909 | CDD | HBS1_C_III | 796 | 904 | - | - | |
Hepe01g2078 | 909 | MobiDBLite | consensus disorder prediction | 381 | 430 | - | - | |
Hepe01g2078 | 909 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 478 | 702 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe01g2078 | 909 | SUPERFAMILY | Translation proteins | 701 | 795 | IPR009000 | - | |
Hepe01g2078 | 909 | Gene3D | Translation factors | 799 | 906 | - | - | |
Hepe01g2078 | 909 | FunFam | elongation factor 1-alpha isoform X4 | 799 | 907 | - | - | |
Hepe01g2078 | 909 | MobiDBLite | consensus disorder prediction | 381 | 419 | - | - | |
Hepe01g2078 | 909 | Pfam | Elongation factor Tu domain 2 | 728 | 791 | IPR004161 | GO:0005525(InterPro) | |
Hepe01g2078 | 909 | PRINTS | GTP-binding elongation factor signature | 541 | 549 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe01g2078 | 909 | PRINTS | GTP-binding elongation factor signature | 577 | 588 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe01g2078 | 909 | PRINTS | GTP-binding elongation factor signature | 561 | 571 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe01g2078 | 909 | PRINTS | GTP-binding elongation factor signature | 482 | 495 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe01g2078 | 909 | PRINTS | GTP-binding elongation factor signature | 622 | 631 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe01g2078 | 909 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Hepe01g2078 | 909 | FunFam | Translation elongation factor EF-1 | 705 | 795 | - | - | |
Hepe01g2078 | 909 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 464 | 712 | IPR027417 | - | |
Hepe01g2078 | 909 | ProSitePatterns | Zinc finger RanBP2-type signature. | 176 | 195 | IPR001876 | - | |
Hepe01g2078 | 909 | SUPERFAMILY | Ran binding protein zinc finger-like | 172 | 199 | IPR036443 | - | |
Hepe01g2078 | 909 | FunFam | Elongation factor 1 alpha-like protein | 471 | 702 | - | - | |
Hepe01g2078 | 909 | Pfam | Elongation factor Tu GTP binding domain | 481 | 697 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Hepe01g2078 | 909 | MobiDBLite | consensus disorder prediction | 25 | 47 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2078 | Hepe-Chr1:85434778 | Hepe02g2977 | Hepe-Chr2:79016581 | 2.49e-85 | dispersed | |
Hepe01g2078 | Hepe-Chr1:85434778 | Hepe08g0870 | Hepe-Chr8:7899664 | 9.22e-86 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g2078 | K14416 | - | csv:101219939 | 1268.06 |