Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g2079 | ATGCCGGGGCTATCCTGTAATGCCTGTAACAAAGAATTTCTTGACAACGAGGAGCAAAAGCTTCACTACAAGTCCGAATGGCATCGATACAATCTTAAGCGCAAGGTAGCTAATGTTCCTGGGGTTACAGAGGCATTATTTTTAGCCAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAAAAGAGACCTCAATGTTATACTCTTGTGGTCTTTGTAGCAAAGCTTATAGGAGCGCCCAGGCTCATACCCAACATCTTAAATCTAGGAGCCACATCATCCGAGCTTCGCAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCTCCTTCCTCAGCGAATTTCAAATAAGGCACCCCAACAAAATGAGGAGGACGAGAGCGAGGAGGAAGAGAGTGAGGAGGAGTGGGAAGAAGTTGATCCTGATACAGATATGATCAATGAGGATGAGGATGACGATTCTGAAGCCATTGAGGTGGACTTGGATCCATCATGCTGCTTCATGTGTGATCGAGAGCATGATACCATTGATAGCTGCATGGTCCACATGCATAAGCAACATGGATTCTTTATTCCCGATGTTGAATATTTGAAGGATCCAAAAGGCTTTCTTACATACCTTGGCCTGAAGGTGACGAGGGATTTCAGGTGTCTGTACTGCAATGATAATTGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCGAAAAGCCACTGCAAAGTGCATTATGGTGATGGAGACGAGAATGAAGAAGTCGAATTGGAAGACTTTTATGATTACAGCAGCAGTTATGTGGATGGAAGTGGCAACCAGCTGGTTTCATCAGGGGATGGGACCGATTCTGTTGAACTTGGAAGTGGTGGAGCTGAGCTCATCTTAGTTCAAAGAACTAGCGAACGGTCTTCGACCAGAACACTTGGTTCCAGGCAATTTCTACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCGGCCATAACTGCTGTCTTGGCAGCAAGGTACAGGAGCATGGGATTGGCAACTGTCCAGTCAAGAGAAAAGATGATCAAGATGAAGGTGATGAAAGAAATGAATCGAACCGGGTTGTATGCCATGCGTACCCAAATCGGATTGAAGAACAACGTAATCCGAAACCTGCCTAAGAATTGTACATACTAG | 1191 | 44.58 | MPGLSCNACNKEFLDNEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENAKSKETSMLYSCGLCSKAYRSAQAHTQHLKSRSHIIRASQGTHDQEVEKPIIKLLPQRISNKAPQQNEEDESEEEESEEEWEEVDPDTDMINEDEDDDSEAIEVDLDPSCCFMCDREHDTIDSCMVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVTRDFRCLYCNDNCLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEDFYDYSSSYVDGSGNQLVSSGDGTDSVELGSGGAELILVQRTSERSSTRTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIKMKVMKEMNRTGLYAMRTQIGLKNNVIRNLPKNCTY | 396 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 85444408 | 85447274 | - | Hsped.01g20790.1 | Hepe01g2079 | 561189 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g2079 | 396 | SUPERFAMILY | beta-beta-alpha zinc fingers | 67 | 100 | IPR036236 | - | |
Hepe01g2079 | 396 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 71 | 93 | IPR013087 | - | |
Hepe01g2079 | 396 | PANTHER | ZINC FINGER PROTEIN 622 | 1 | 394 | IPR040025 | GO:0030687(PANTHER)|GO:0042273(PANTHER) | |
Hepe01g2079 | 396 | MobiDBLite | consensus disorder prediction | 113 | 157 | - | - | |
Hepe01g2079 | 396 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 28 | IPR013087 | - | |
Hepe01g2079 | 396 | SMART | c2h2final6 | 4 | 28 | IPR013087 | - | |
Hepe01g2079 | 396 | SMART | c2h2final6 | 69 | 93 | IPR013087 | - | |
Hepe01g2079 | 396 | SMART | c2h2final6 | 219 | 246 | IPR013087 | - | |
Hepe01g2079 | 396 | SMART | c2h2final6 | 168 | 191 | IPR013087 | - | |
Hepe01g2079 | 396 | SUPERFAMILY | beta-beta-alpha zinc fingers | 153 | 206 | IPR036236 | - | |
Hepe01g2079 | 396 | SUPERFAMILY | beta-beta-alpha zinc fingers | 4 | 36 | IPR036236 | - | |
Hepe01g2079 | 396 | SMART | ZnF_U1_5 | 1 | 35 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Hepe01g2079 | 396 | SMART | ZnF_U1_5 | 66 | 100 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Hepe01g2079 | 396 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 69 | 93 | IPR013087 | - | |
Hepe01g2079 | 396 | MobiDBLite | consensus disorder prediction | 127 | 157 | - | - | |
Hepe01g2079 | 396 | Pfam | C2H2 type zinc-finger (2 copies) | 170 | 272 | IPR041661 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g2079 | K14816 | - | csv:101219700 | 659.448 |