Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2079 ATGCCGGGGCTATCCTGTAATGCCTGTAACAAAGAATTTCTTGACAACGAGGAGCAAAAGCTTCACTACAAGTCCGAATGGCATCGATACAATCTTAAGCGCAAGGTAGCTAATGTTCCTGGGGTTACAGAGGCATTATTTTTAGCCAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAAAAGAGACCTCAATGTTATACTCTTGTGGTCTTTGTAGCAAAGCTTATAGGAGCGCCCAGGCTCATACCCAACATCTTAAATCTAGGAGCCACATCATCCGAGCTTCGCAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCTCCTTCCTCAGCGAATTTCAAATAAGGCACCCCAACAAAATGAGGAGGACGAGAGCGAGGAGGAAGAGAGTGAGGAGGAGTGGGAAGAAGTTGATCCTGATACAGATATGATCAATGAGGATGAGGATGACGATTCTGAAGCCATTGAGGTGGACTTGGATCCATCATGCTGCTTCATGTGTGATCGAGAGCATGATACCATTGATAGCTGCATGGTCCACATGCATAAGCAACATGGATTCTTTATTCCCGATGTTGAATATTTGAAGGATCCAAAAGGCTTTCTTACATACCTTGGCCTGAAGGTGACGAGGGATTTCAGGTGTCTGTACTGCAATGATAATTGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCGAAAAGCCACTGCAAAGTGCATTATGGTGATGGAGACGAGAATGAAGAAGTCGAATTGGAAGACTTTTATGATTACAGCAGCAGTTATGTGGATGGAAGTGGCAACCAGCTGGTTTCATCAGGGGATGGGACCGATTCTGTTGAACTTGGAAGTGGTGGAGCTGAGCTCATCTTAGTTCAAAGAACTAGCGAACGGTCTTCGACCAGAACACTTGGTTCCAGGCAATTTCTACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCGGCCATAACTGCTGTCTTGGCAGCAAGGTACAGGAGCATGGGATTGGCAACTGTCCAGTCAAGAGAAAAGATGATCAAGATGAAGGTGATGAAAGAAATGAATCGAACCGGGTTGTATGCCATGCGTACCCAAATCGGATTGAAGAACAACGTAATCCGAAACCTGCCTAAGAATTGTACATACTAG 1191 44.58 MPGLSCNACNKEFLDNEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENAKSKETSMLYSCGLCSKAYRSAQAHTQHLKSRSHIIRASQGTHDQEVEKPIIKLLPQRISNKAPQQNEEDESEEEESEEEWEEVDPDTDMINEDEDDDSEAIEVDLDPSCCFMCDREHDTIDSCMVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVTRDFRCLYCNDNCLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEDFYDYSSSYVDGSGNQLVSSGDGTDSVELGSGGAELILVQRTSERSSTRTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIKMKVMKEMNRTGLYAMRTQIGLKNNVIRNLPKNCTY 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85444408 85447274 - Hsped.01g20790.1 Hepe01g2079 561189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2079 396 SUPERFAMILY beta-beta-alpha zinc fingers 67 100 IPR036236 -
Hepe01g2079 396 ProSitePatterns Zinc finger C2H2 type domain signature. 71 93 IPR013087 -
Hepe01g2079 396 PANTHER ZINC FINGER PROTEIN 622 1 394 IPR040025 GO:0030687(PANTHER)|GO:0042273(PANTHER)
Hepe01g2079 396 MobiDBLite consensus disorder prediction 113 157 - -
Hepe01g2079 396 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Hepe01g2079 396 SMART c2h2final6 4 28 IPR013087 -
Hepe01g2079 396 SMART c2h2final6 69 93 IPR013087 -
Hepe01g2079 396 SMART c2h2final6 219 246 IPR013087 -
Hepe01g2079 396 SMART c2h2final6 168 191 IPR013087 -
Hepe01g2079 396 SUPERFAMILY beta-beta-alpha zinc fingers 153 206 IPR036236 -
Hepe01g2079 396 SUPERFAMILY beta-beta-alpha zinc fingers 4 36 IPR036236 -
Hepe01g2079 396 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Hepe01g2079 396 SMART ZnF_U1_5 66 100 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Hepe01g2079 396 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 93 IPR013087 -
Hepe01g2079 396 MobiDBLite consensus disorder prediction 127 157 - -
Hepe01g2079 396 Pfam C2H2 type zinc-finger (2 copies) 170 272 IPR041661 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2079 K14816 - csv:101219700 659.448