Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2084 ATGTGGAATCCCCTCTCTTGGGTCATGGAAGCAGCGGCTATAATGGCTATTGTCTTAGCAAACGGCGGGGGAAGGCCTCCAGATTGGCAGGATTTTGTTGGAATCATTACCTTACTTGTCATCAACTCAACCATCAGTTTTTTTGAAGAAAACAACGCTGGAAATGCAGCTGCAGCCCTTATGGCCGGTCTTGCTCCCAAAACTAAGGTTCTCAGAGATGGTCGTTGGAGTGAGCAAGATGCTTCTATTCTTGTTCCTGGAGATATAGTAAGTATCAAACTGGGAGACATTATCCCTGCTGATGCTCGTCTTCTTGAGGGTGACCCTTTAAAGATTGATCAATCTGCTTTAACTGGCGAGTCCCTCCCTGTTACCAAAAACCCTTCAGAAGGAGTTTTTTCGGGATCGACCTGTAAACAGGGAGAAATTGAAGCTGTAGTGATTGCCACTGGTGTGCATACCTTCTTTGGTAAAGCTGCTCATTTAGTGGACAGCACCAATCAAGTTGGGCATTTCCAAAAAGTTCTTACTGCCATTGGGAATTTCTGCATTTGCTCCATTGCTATTGGAATTGTTATCGAGATCATAGTCATGTACCCAATTCAACACCGTGCCTATAGGGATGGCATTGACAATTTGCTCGTGCTTTTGATTGGAGGAATTCCTATTGCCATGCCCACTGTTTTGTCTGTCACCATGGCCATTGGTTCCCACCGGCTTTCTAAGCAAGGCGCAATTACCAAGCGGATGACTGCCATTGAGGAGATGGCTGGCATGGATGTCCTCTGCAGTGACAAGACTGGAACATTAACCTTGAATAAGCTCACTGTTGACCGATCCTTGACTGAAGTCTTTGTGGGGGATGTCGATAAAGAACATGTCATCCTTCTTGCAGCTAGGGCTTCTAGAACAGAAAATCAGGATGCCATTGATGCTGCTATTGTTGGAATGTTGGCAGATCCAAAAGAGGCACGAAGTGGTATTAGAGAGGTTCATTTTTTTCCATTCAACCCTGTCGATAAGAGAACTGCTCTGACTTACATTGATTCTAATGATAACTGGCACCGTGCTAGCAAAGGTGCTCCAGAGCAGATCTTAAATCTTTGCAATTCCAGCGAAGTCATCAGGAAAAAAGTTCATGAAGCGATTGATAAGTTTGCTGAATGCGGACTCCGGTCCCTGGGCGTTGCTAGACAGGAAGTACCTGAGAAAACCAAAGAAAGTCCAGGAAAACCGTGGCAACTTGTTGGTTTGTTAGCTCTGTTTGATCCTCCCAGGCATGATAGTGCAGAAACCATCAGAAGGGCTCTGAACCTTGGAGTAAATGTCAAAATGATCACTGGTGACCAACTGGCCATTGCCAAGGAAACCGGCCGGAGACTCGGCATGGGATCAAATATGTACCCTTCTTCTGCATTACTTGGTCAAGACAGGGGTCCATCAGCAGATACCCTTCCTGTGGATGAGTTGATTGAAACAGCTGATGGATTTGCTGGTGTATTTCCAGAACACAAATATGAAATTGTGAGAAAGTTACAAGAGAAGAAACACATTTGTGGAATGACTGGAGATGGTGTAAATGATGCCCCTGCATTAAAGAAGGCAGATATTGGAATTGCTGTTGCTGATGCAACCGATGCAGCTAGAGGCGCTTCTGACATTGTCCTCACCGAACCAGGATTGAGCGTTATTATCAGTGCAGTACTGACTAGCAGGGCTATTTTCCAGAGGATGAAGAACTATACGATTTATGCCGTTTCCATCACCATTCGTATAGTGTTTGGTTTTATGTTGATTGCTTTGATTTGGAAGTTTGATTTTGCTCCATTCATGGTTTTAATTATAGCCATTCTAAACGATGGAACAATCATGACCATTTCGAAGGATCGAGTTAAGCCTTCTCCGCTGCCTGACAGCTGGAAGTTGAAGGAAATTTTCGCTACTGGCATCGTGTTAGGAGGATACATGGCACTGATGACCGTTATATTCTTCTGGATCGTGAGAGACACTGACTTTTTCCCGAATACCTTTCATGTAGAATCCCTGAGGATCGACGACCCAAGAATGATGGCAGCATTATATCTACAAGTTAGTATCGTGAGTCAGGCCCTTATTTTCGTCACAAGGTCTCGAAGTTGGTCCTTTGTCGAACGTCCTGGACTTCTGTTAGTGGGTGCTTTCATAGTTGCCCAGATGGTAGCAACTGTAATAGCAGTGTATGCAAACTGGGAATTTGCAAGGATAAAAGGCGTTGGCTGGGGGTGGGCTGGTGTGATCTGGCTATATAGTTTTATAACTTATATCCCTCTTGATATTCTCAAATTTGCCATCCGCTATGTTCACAGTGGAAGGGCTTGGAACAACCTTTTGCAAAATAAGACTGCTTTTACAACAAAGAAAGATTATGGAAAAGAAGAGAGAGAAGCACAGTGGGCTACCACACAAAGGACTATTCATGGTCTTCAACCACCTCAATCCAATGCCGCTCTTTCTGATAGGAACAGTTGCGGGGAGCTTTCTGAAATCGCCGAGCAAGCCAAGCGACGGGCCGAAATTGCAAGGCTGCGCGAGTTGCACACTCTAAAAGGTCGGGTCGAGTCGGTGGTGAAGTTGAAAGGACTAGACATCGATACAAACAATCAACATTACACAGTCTAA 2658 44.77 MWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGIITLLVINSTISFFEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDASILVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSEGVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGIVIEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSKQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLTEVFVGDVDKEHVILLAARASRTENQDAIDAAIVGMLADPKEARSGIREVHFFPFNPVDKRTALTYIDSNDNWHRASKGAPEQILNLCNSSEVIRKKVHEAIDKFAECGLRSLGVARQEVPEKTKESPGKPWQLVGLLALFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSALLGQDRGPSADTLPVDELIETADGFAGVFPEHKYEIVRKLQEKKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYMALMTVIFFWIVRDTDFFPNTFHVESLRIDDPRMMAALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVGAFIVAQMVATVIAVYANWEFARIKGVGWGWAGVIWLYSFITYIPLDILKFAIRYVHSGRAWNNLLQNKTAFTTKKDYGKEEREAQWATTQRTIHGLQPPQSNAALSDRNSCGELSEIAEQAKRRAEIARLRELHTLKGRVESVVKLKGLDIDTNNQHYTV 885
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 85476883 85481514 + Hsped.01g20840.1 Hepe01g2084 561194
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2084 885 Pfam E1-E2 ATPase 65 243 - -
Hepe01g2084 885 SUPERFAMILY HAD-like 259 569 IPR036412 -
Hepe01g2084 885 FunFam Plasma membrane ATPase 275 422 - -
Hepe01g2084 885 SFLD p-type atpase 245 573 IPR044492 -
Hepe01g2084 885 PRINTS H+-transporting ATPase (proton pump) signature 494 510 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe01g2084 885 PRINTS H+-transporting ATPase (proton pump) signature 379 397 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe01g2084 885 PRINTS H+-transporting ATPase (proton pump) signature 553 578 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe01g2084 885 PRINTS H+-transporting ATPase (proton pump) signature 522 538 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe01g2084 885 PRINTS H+-transporting ATPase (proton pump) signature 694 715 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe01g2084 885 SFLD Haloacid Dehalogenase 245 573 - -
Hepe01g2084 885 ProSitePatterns E1-E2 ATPases phosphorylation site. 265 271 IPR018303 -
Hepe01g2084 885 PRINTS P-type cation-transporting ATPase superfamily signature 545 557 - -
Hepe01g2084 885 PRINTS P-type cation-transporting ATPase superfamily signature 113 127 - -
Hepe01g2084 885 PRINTS P-type cation-transporting ATPase superfamily signature 439 449 - -
Hepe01g2084 885 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Hepe01g2084 885 PRINTS P-type cation-transporting ATPase superfamily signature 522 541 - -
Hepe01g2084 885 PRINTS P-type cation-transporting ATPase superfamily signature 417 428 - -
Hepe01g2084 885 Gene3D - 66 150 - -
Hepe01g2084 885 PANTHER CALCIUM-TRANSPORTING ATPASE 1 809 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Hepe01g2084 885 Gene3D - 260 559 IPR023214 -
Hepe01g2084 885 FunFam ATPase 4 plasma membrane-type 512 749 - -
Hepe01g2084 885 Gene3D - 835 885 - -
Hepe01g2084 885 FunFam Plasma membrane ATPase 66 150 - -
Hepe01g2084 885 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 781 IPR023298 -
Hepe01g2084 885 Gene3D - 275 422 IPR023299 GO:0000166(InterPro)
Hepe01g2084 885 FunFam Plasma membrane ATPase 414 570 - -
Hepe01g2084 885 Pfam haloacid dehalogenase-like hydrolase 259 536 - -
Hepe01g2084 885 NCBIfam HAD-IC family P-type ATPase 35 282 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe01g2084 885 NCBIfam HAD-IC family P-type ATPase 497 612 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe01g2084 885 Gene3D - 28 749 - -
Hepe01g2084 885 SUPERFAMILY Calcium ATPase, transduction domain A 66 163 IPR008250 -
Hepe01g2084 885 CDD P-type_ATPase_H 1 775 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Hepe01g2084 885 NCBIfam plasma-membrane proton-efflux P-type ATPase 1 740 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2084 Hepe-Chr1:85476883 Hepe08g2119 Hepe-Chr8:59969002 0.0 dispersed
Hepe01g2084 Hepe-Chr1:85476883 Hepe10g0315 Hepe-Chr10:3363824 0.0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2084 K01535 - csv:101219224 1539.63