Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2096 ATGACCACTGATTTCAATTTGGGAATTGTTGTGACTGTTTTTCGCACTTTTGCCGATGTGTTCTATCTGTTGCATATGGTTTTGAAGTTCCGGATGGCTTATGTATCTCCCACTTCAAGAGTTTTTGGCAAAGGGGAACTTGTCACTGATCCAGAGAAGATTGCCAAACGCTATTTAACGTCTGATTTCTGTATAGATCTCATTGCTTCTCTGCCTCTTCCTCAGATTATGATATGGTTTATCATGCCAGCAATTAGAAGCTCTCATGCAGACCATACAAACAATACTCTTGTGTTAATAGTCCTGCTTCAGTATATTCCAAGATTTTATCTGATTTTCCCATTAAGTTCCCACATTATCAAAACTACTGGTGTTGTCACAAAGACTGCTTGGGCAGGGGCTGCTTATAACCTTGTATTGTATATGCTAGCTAGTCATATCTTAGGAGCAGCTTGGTATTTACTGTCTGTGGAGCGCCATGCCATGTGCTGGAAGTTCACCTGCAAGAAGGAATTCAGTCCTATGAAATGCCTTCTTGACTACCTGGATTGTGGTACCTTAAATGATGTAGACCGTAGGATATGGGAAGTAAATACTACTGTATTTAGCCAATGTTCTCCAGAAGAAGACGTCGTTTTCAATTACGGGATATTTGCGGGTGCGATCGCGAAAAATGTCATCTCCTCTGGGTTCCTTCAGAAGTACTTCTATTGTCTATGGTGGGGCTTACAGAACTTGAGTTCCTATGGTCAGGGTTTGCAGACAAGTACCTTCATAGGAGAGACTTCATTTGCTATCCTCATTGCTATAGTGGGTTTGGTCTTATTTGCGCATTTGATCGGAAATATGCAGACCTATTTGCAATCCATCACTGTGAGACTGGAGGAGTGTAGGATCAAGCGTCGAGACACTGAGGAATGGATGAAACATCGACAACTCCCTCGAGATTTACAAGAACGTGTGAGGAGATTTGTTCAGTATAAATGGCTTGCAACACGAGGAGTCGACGAAGAGTCAATCTTACAAGGCCTTCCAACAGATCTCCGTCGGGATATTCAACGTCACTTGTGCCTCGACCTTGTTCGACGTGTTCCTTTTTTCGCGCAGATGGATGATCAGCTACTTGACGCGATTTGCGAGCGATTGGCATCCTCTTTATGTACACAAGGTACTAACATTGTTCGTGAAGGAGATCCAGTAACTGAGATGCTCTTTATCATCCGAGGGATGCTCGAGAGTTCCACAACAGATGGAGGGCGGTCGGGTTTCTTCAATTCGATAACCTTAAGACCCGGTGATTTTTGTGGGGAAGAGCTTCTTGCTTGGGCATTGCTTCCAAACTCATCCATCAGCTTGCCATCTTCTACTAGAACAGTTAAAGCAATCACTGAAGTGGAAGCCTTTGCTCTGCGAGCAGAGGATCTCAAATTCGTGGCTAACCAGTTTCGACGTCTTCATAGCAAGAAGCTTCAACACACCTTCCGATTTTACTCTCATCACTGGAGAACCTGGGCAGCCTGCTTCATTCAGGCAGCATGGCGTCGCTTCAAAAGGAGAATCATAGCAAAGTCCCTCAGCATGCAGGAGTCTTTCTCGTTGACTCCCAAGAAGCCAGTGGCTGAAGAAGCCGAACAAGAAGAGGAAGAACATAATACACCGCGCTCCAATTACTCTCAAGCAAAACAACACCTTGGCATCACGATATTGGCTTCGAGGTTCGCTGCAAACACACGTAGAGGAGCACAAAAGCTGAAGGAGGTCAACTTATCGAAGCTTCGAAAGCCTGATGAGCCAGACTTTTCAGAAGAACCAGATGATTAA 1821 44.43 MTTDFNLGIVVTVFRTFADVFYLLHMVLKFRMAYVSPTSRVFGKGELVTDPEKIAKRYLTSDFCIDLIASLPLPQIMIWFIMPAIRSSHADHTNNTLVLIVLLQYIPRFYLIFPLSSHIIKTTGVVTKTAWAGAAYNLVLYMLASHILGAAWYLLSVERHAMCWKFTCKKEFSPMKCLLDYLDCGTLNDVDRRIWEVNTTVFSQCSPEEDVVFNYGIFAGAIAKNVISSGFLQKYFYCLWWGLQNLSSYGQGLQTSTFIGETSFAILIAIVGLVLFAHLIGNMQTYLQSITVRLEECRIKRRDTEEWMKHRQLPRDLQERVRRFVQYKWLATRGVDEESILQGLPTDLRRDIQRHLCLDLVRRVPFFAQMDDQLLDAICERLASSLCTQGTNIVREGDPVTEMLFIIRGMLESSTTDGGRSGFFNSITLRPGDFCGEELLAWALLPNSSISLPSSTRTVKAITEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRFKRRIIAKSLSMQESFSLTPKKPVAEEAEQEEEEHNTPRSNYSQAKQHLGITILASRFAANTRRGAQKLKEVNLSKLRKPDEPDFSEEPDD 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85570136 85578054 + Hsped.01g20960.1 Hepe01g2096 561206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2096 606 MobiDBLite consensus disorder prediction 584 599 - -
Hepe01g2096 606 SUPERFAMILY Voltage-gated potassium channels 4 288 - -
Hepe01g2096 606 CDD CAP_ED 366 497 IPR000595 -
Hepe01g2096 606 ProSiteProfiles cAMP/cGMP binding motif profile. 366 496 IPR000595 -
Hepe01g2096 606 Gene3D Helix hairpin bin 294 357 - -
Hepe01g2096 606 MobiDBLite consensus disorder prediction 584 606 - -
Hepe01g2096 606 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 584 - -
Hepe01g2096 606 SMART cnmp_10 366 497 IPR000595 -
Hepe01g2096 606 FunFam Cyclic nucleotide-gated ion channel 1 293 357 - -
Hepe01g2096 606 MobiDBLite consensus disorder prediction 534 559 - -
Hepe01g2096 606 Gene3D Jelly Rolls 364 484 IPR014710 -
Hepe01g2096 606 FunFam Cyclic nucleotide-gated ion channel 1 364 482 - -
Hepe01g2096 606 Gene3D - 2 292 - -
Hepe01g2096 606 Pfam Cyclic nucleotide-binding domain 389 478 IPR000595 -
Hepe01g2096 606 SUPERFAMILY cAMP-binding domain-like 297 488 IPR018490 -
Hepe01g2096 606 Pfam Ion transport protein 9 293 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g2096 606 MobiDBLite consensus disorder prediction 539 554 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2096 Hepe-Chr1:85570136 Hepe09g0522 Hepe-Chr9:4885919 0.0 dispersed
Hepe01g2096 Hepe-Chr1:85570136 Hepe02g1860 Hepe-Chr2:28925007 8.99e-273 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2096 K05391 - csv:101211072 1109.75