Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g2106 | ATGGATTCAAAGAAGTCCAACAAGATCAGAGACATCGTAAGGCTTCAACAGATCATCAAGAAATGGCGAAAGCTAGCGAACTCATCAAAGACGGCGAACAGATCAGTCTCCGGCACGGCGGCGACGGGACCAGCCGGAAAGAGCATAAAGTTTCTGAAGCGGACTCTCTCCGGCGGCGGGGAGAGCTCCGGCGTGCCGAAAGGGTATTTGGCGGTGAGCGTCGGGGAGGAGCAGAAGAGAATTGTGATTCCGACGGCTTACTTGGGGCATCCGGCGTTTGAGATTCTGCTGAGGGAGGCGGAGGAGGAATTTGGGTTTCAACAAACGGGGGTATTGAGGCTGCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGACGAAGAAGGGAGATTTGTTTGGTGGTGGAGATGAGATTTTGAGTTTTTGTTCATTGGAATCGGTGCATCTTACGCCGTCGCACCGTCCGCCGAGTCCAATGTGCAGATAG | 498 | 52.61 | MDSKKSNKIRDIVRLQQIIKKWRKLANSSKTANRSVSGTAATGPAGKSIKFLKRTLSGGGESSGVPKGYLAVSVGEEQKRIVIPTAYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVETKKGDLFGGGDEILSFCSLESVHLTPSHRPPSPMCR | 165 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 85682686 | 85683438 | - | Hsped.01g21060.1 | Hepe01g2106 | 561216 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g2106 | 165 | Pfam | Auxin responsive protein | 14 | 127 | IPR003676 | GO:0009733(InterPro) | |
| Hepe01g2106 | 165 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 15 | 127 | IPR003676 | GO:0009733(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g2106 | Hepe-Chr1:85682686 | Hepe02g0456 | Hepe-Chr2:4472477 | 4.24e-20 | dispersed | |
| Hepe01g2106 | Hepe-Chr1:85682686 | Hepe07g1374 | Hepe-Chr7:44929917 | 3.84e-21 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g2106 | K14488 | - | csv:101216710 | 256.914 |