Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2126 ATGGATAGGCTCTGCTGTTTTAATGCTTCATACTCTCGGATTAGATCTGCATCAAACTACGGTAAAGGAAGAAACCATGAGGGGCTAATCAAGTATGGGTTCTGCTTGGTAAAAGGGAAAGCTAATCATCCCATGGAAGATTACCATGTTGCAAAGTTTGTTGAGATTCAAGAACATGAGTTGGGGCTCTTTGCTATTTATGATGGCCATTTAGGAGAAAGTGTGCCTGCCTATTTACAAAAGCATTTGTTTTCTAATATCCTGAAAGAGGAAGAGTTTTGGGTTGACCCCAACAGCTCCATCTCGAAAGCCTATGAGAAGACGGACCAGGCAATTCTATCCCACAGCTCTGACTTGGGTCGTGGCGGATCAACTGCTGTTACTGCTATTCTGATAAATGGTCAACGACTATGGCTGGCCAATGTTGGAGATTCACGGGCAGTTCTTTCGAGAGGGGGTGAAGCGGTACAGATGACCATCGATCATGAGCCGAATACAGAACGCGGCATCATTGAGAATAAAGGTGGTTTTGTTTCGAACATGCCAGGAGACGTACCTCGAGTGAACGGCCAGCTAGCAGTTTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACCTGCGATCAGATCCTGACATACGTGATATTAATATAGACGCCAACATGGACATATTAATTCTCGCCAGCGACGGTCTTTGGAAGGTAATGGCCAATCAAGAAGCAGTTGATATTGCAAGAAGAATTAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAAGCTTTGCAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTGA 840 43.69 MDRLCCFNASYSRIRSASNYGKGRNHEGLIKYGFCLVKGKANHPMEDYHVAKFVEIQEHELGLFAIYDGHLGESVPAYLQKHLFSNILKEEEFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWLANVGDSRAVLSRGGEAVQMTIDHEPNTERGIIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDINIDANMDILILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALQKESKDDISCIVVRFR 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85895053 85898970 + Hsped.01g21260.1 Hepe01g2126 561236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2126 279 PANTHER PROTEIN PHOSPHATASE 27 276 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe01g2126 279 FunFam Probable protein phosphatase 2C 39 22 279 - -
Hepe01g2126 279 SUPERFAMILY PP2C-like 29 278 IPR036457 -
Hepe01g2126 279 Gene3D - 26 279 IPR036457 -
Hepe01g2126 279 ProSiteProfiles PPM-type phosphatase domain profile. 31 278 IPR001932 -
Hepe01g2126 279 CDD PP2Cc 30 278 IPR001932 -
Hepe01g2126 279 SMART PP2C_SIG_2 42 278 IPR001932 -
Hepe01g2126 279 Pfam Protein phosphatase 2C 40 271 IPR001932 -
Hepe01g2126 279 SMART PP2C_4 23 276 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1396 Hepe-Chr1:79193775 Hepe01g2126 Hepe-Chr1:85895053 9.75e-107 dispersed
Hepe01g2126 Hepe-Chr1:85895053 Hepe07g0339 Hepe-Chr7:3402805 3.00e-155 dispersed
Hepe01g2126 Hepe-Chr1:85895053 Hepe02g0124 Hepe-Chr2:1422576 6.38e-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2126 K17506 - csv:101213414 535.413