Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2127 ATGGCGAAGGAGAGAGAGACGCTCATTTACTCTGCTAGATTAGCAGAGCAGGCTGAGAGATATGAAGAGATGGTTGAGGAAATGAAGAAAGTTGCGAAGTTAAATGTGGAATTGACAGTGGAAGAGAGAAATCTGCTGTCTGTTGGATATAAGAATGTGATAGGAGCTAGACGAGCTTCGTGGCGCATTTTGTCTTCAATTGAACAGAAGGAGAATACCAAACACAATGAGAAGAATGTGGATCGGATTATTCGGTACAGGCAACGGGTTGAAGATGAGCTCTCTGAAATATGCAGTGACATATTGTCAATTATTGACCAGCATCTCCTTCCAAGTTCCTCAGCTGGAGAGTCTACTGTCTTCTACCATAAGATGAAAGGAGATTATTGTCGGTATTTGGCGGAGTTTAAATCTGGTGATGAGCGTAAACAAGTTGCAGATCAATCATTAAAGGCTTATGAGGCTGCTTCTACGATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATTTTGAATTCCTCTGAAAGGGCTTGCCACCTTGCCAAGCAAGCCTTTGATGAGGCGATTGCAGAACTTGACAGTCTCAATGAAGACTCCTACAAGGACAGTACTCTCATTATGCAGCTTCTCAGGGACAATCTAACCCTGTGGACTTCCGATCTGCCAGACGAAGGCGGAGAGCAGTCCAATGCAGATGAACTTTAG 750 43.47 MAKERETLIYSARLAEQAERYEEMVEEMKKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKENTKHNEKNVDRIIRYRQRVEDELSEICSDILSIIDQHLLPSSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKAYEAASTIANSDLSPTHPIRLGLALNFSVFYYEILNSSERACHLAKQAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSNADEL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85900743 85906988 - Hsped.01g21270.1 Hepe01g2127 561237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2127 249 Pfam 14-3-3 protein 12 233 IPR023410 -
Hepe01g2127 249 Gene3D - 1 246 IPR036815 -
Hepe01g2127 249 Coils Coil 11 34 - -
Hepe01g2127 249 FunFam 14-3-3 protein epsilon 1 246 - -
Hepe01g2127 249 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Hepe01g2127 249 SMART 1433_4 5 246 IPR023410 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Hepe01g2127 249 Coils Coil 193 213 - -
Hepe01g2127 249 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Hepe01g2127 249 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Hepe01g2127 249 PIRSF 2014/3/3 1 246 IPR000308 -
Hepe01g2127 249 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2127 Hepe-Chr1:85900743 Hepe02g0098 Hepe-Chr2:1171079 4.95e-128 dispersed
Hepe01g2127 Hepe-Chr1:85900743 Hepe10g0497 Hepe-Chr10:5752248 1.96e-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2127 K06630 - csv:101213169 425.631