Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2127 ATGGCGAAGGAGAGAGAGACGCTCATTTACTCTGCTAGATTAGCAGAGCAGGCTGAGAGATATGAAGAGATGGTTGAGGAAATGAAGAAAGTTGCGAAGTTAAATGTGGAATTGACAGTGGAAGAGAGAAATCTGCTGTCTGTTGGATATAAGAATGTGATAGGAGCTAGACGAGCTTCGTGGCGCATTTTGTCTTCAATTGAACAGAAGGAGAATACCAAACACAATGAGAAGAATGTGGATCGGATTATTCGGTACAGGCAACGGGTTGAAGATGAGCTCTCTGAAATATGCAGTGACATATTGTCAATTATTGACCAGCATCTCCTTCCAAGTTCCTCAGCTGGAGAGTCTACTGTCTTCTACCATAAGATGAAAGGAGATTATTGTCGGTATTTGGCGGAGTTTAAATCTGGTGATGAGCGTAAACAAGTTGCAGATCAATCATTAAAGGCTTATGAGGCTGCTTCTACGATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCTCTGAACTTCTCTGTTTTCTACTATGAGATTTTGAATTCCTCTGAAAGGGCTTGCCACCTTGCCAAGCAAGCCTTTGATGAGGCGATTGCAGAACTTGACAGTCTCAATGAAGACTCCTACAAGGACAGTACTCTCATTATGCAGCTTCTCAGGGACAATCTAACCCTGTGGACTTCCGATCTGCCAGACGAAGGCGGAGAGCAGTCCAATGCAGATGAACTTTAG 750 43.47 MAKERETLIYSARLAEQAERYEEMVEEMKKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKENTKHNEKNVDRIIRYRQRVEDELSEICSDILSIIDQHLLPSSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKAYEAASTIANSDLSPTHPIRLGLALNFSVFYYEILNSSERACHLAKQAFDEAIAELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSNADEL 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85900743 85906988 - Hsped.01g21270.1 Hepe01g2127 561237

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2127 249 Pfam 14-3-3 protein 12 233 IPR023410 -
Hepe01g2127 249 Gene3D - 1 246 IPR036815 -
Hepe01g2127 249 Coils Coil 11 34 - -
Hepe01g2127 249 FunFam 14-3-3 protein epsilon 1 246 - -
Hepe01g2127 249 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Hepe01g2127 249 SMART 1433_4 5 246 IPR023410 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Hepe01g2127 249 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Hepe01g2127 249 Coils Coil 193 213 - -
Hepe01g2127 249 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Hepe01g2127 249 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Hepe01g2127 249 PIRSF 2014/3/3 1 246 IPR000308 -
Hepe01g2127 249 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2127 K06630 - - csv:101213169 425.631
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2127 Hepe-Chr1:85900743 Hepe02g0098 Hepe-Chr2:1171079 4.95e-128 dispersed
Hepe01g2127 Hepe-Chr1:85900743 Hepe10g0497 Hepe-Chr10:5752248 1.96e-133 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe10g0481 . 1 245 14-3-3 family AT4G09000 90.6 2.8e-120 428.7
Hepe02g0894 . 6 243 14-3-3 family AT4G09000 85.7 1.2e-112 403.3
Hepe01g2137 . 5 203 14-3-3 family AT4G09000 90.5 4.3e-97 351.7
Hepe10g0409 . 10 246 14-3-3 family AT4G09000 74.3 5.6e-97 351.3
Hepe02g0098 . 7 238 14-3-3 family AT4G09000 73.5 7.6e-94 340.9
Hepe10g0578 . 4 239 14-3-3 family AT4G09000 71.8 1.7e-90 329.7
Hepe10g1790 . 4 239 14-3-3 family AT4G09000 71.0 2.3e-90 329.3
Hepe01g2127 . 5 236 14-3-3 family AT4G09000 71.8 5.6e-89 324.7
Hepe10g0497 . 5 236 14-3-3 family AT4G09000 69.2 1.4e-87 320.1
Hepe10g0481 . 11 264 14-3-3 family AT1G78300 91.0 5.2e-125 444.1
Hepe02g0894 . 6 241 14-3-3 family AT1G78300 88.6 2.0e-113 405.6
Hepe10g0409 . 11 247 14-3-3 family AT1G78300 75.1 2.4e-98 355.5
Hepe01g2137 . 5 203 14-3-3 family AT1G78300 91.0 3.5e-97 351.7
Hepe02g0098 . 7 247 14-3-3 family AT1G78300 71.6 1.1e-93 340.1
Hepe10g0578 . 8 257 14-3-3 family AT1G78300 69.8 9.8e-92 333.6
Hepe10g1790 . 8 255 14-3-3 family AT1G78300 69.6 1.7e-91 332.8
Hepe10g0497 . 1 250 14-3-3 family AT1G78300 67.5 8.3e-91 330.5
Hepe01g2127 . 1 243 14-3-3 family AT1G78300 68.2 2.1e-89 325.9
Hepe02g0894 . 6 243 14-3-3 family AT5G38480 90.3 2.3e-117 418.7
Hepe10g0481 . 9 255 14-3-3 family AT5G38480 84.6 3.4e-113 404.8
Hepe10g0409 . 10 251 14-3-3 family AT5G38480 74.0 2.9e-96 348.6
Hepe10g1790 . 8 258 14-3-3 family AT5G38480 72.3 2.3e-93 339.0
Hepe02g0098 . 7 247 14-3-3 family AT5G38480 72.4 6.7e-93 337.4
Hepe10g0497 . 5 250 14-3-3 family AT5G38480 72.2 1.1e-92 336.7
Hepe10g0578 . 8 255 14-3-3 family AT5G38480 72.4 1.1e-92 336.7
Hepe01g2127 . 5 248 14-3-3 family AT5G38480 69.9 2.9e-88 322.0
Hepe01g2137 . 6 203 14-3-3 family AT5G38480 83.3 1.4e-87 319.7
Hepe10g0481 . 1 245 14-3-3 family AT1G35160 89.8 1.1e-120 429.9
Hepe02g0894 . 6 240 14-3-3 family AT1G35160 86.4 7.5e-112 400.6
Hepe10g0409 . 1 246 14-3-3 family AT1G35160 72.8 1.2e-96 350.1
Hepe01g2137 . 4 203 14-3-3 family AT1G35160 88.0 1.7e-95 346.3
Hepe02g0098 . 2 237 14-3-3 family AT1G35160 71.4 2.9e-92 335.5
Hepe10g0578 . 8 239 14-3-3 family AT1G35160 72.6 2.8e-90 328.9
Hepe10g1790 . 8 239 14-3-3 family AT1G35160 71.8 3.6e-90 328.6
Hepe10g0497 . 5 236 14-3-3 family AT1G35160 69.2 3.4e-88 322.0
Hepe01g2127 . 5 236 14-3-3 family AT1G35160 71.4 4.4e-88 321.6
Hepe02g0894 . 5 241 14-3-3 family AT5G16050 84.4 4.1e-109 391.3
Hepe10g0481 . 6 256 14-3-3 family AT5G16050 78.1 2.9e-107 385.2
Hepe10g0409 . 10 248 14-3-3 family AT5G16050 70.7 5.1e-91 331.3
Hepe10g0578 . 3 246 14-3-3 family AT5G16050 66.3 5.4e-85 311.2
Hepe02g0098 . 1 247 14-3-3 family AT5G16050 64.7 7.1e-85 310.8
Hepe10g0497 . 2 247 14-3-3 family AT5G16050 66.1 7.1e-85 310.8
Hepe10g1790 . 3 246 14-3-3 family AT5G16050 64.2 1.0e-83 307.0
Hepe01g2127 . 5 242 14-3-3 family AT5G16050 65.8 4.3e-82 301.6
Hepe01g2137 . 4 203 14-3-3 family AT5G16050 76.5 1.8e-80 296.2
Hepe10g0409 . 9 246 14-3-3 family AT5G10450 87.4 2.8e-113 405.2
Hepe10g0481 . 6 254 14-3-3 family AT5G10450 76.4 8.2e-105 377.1
Hepe02g0894 . 7 241 14-3-3 family AT5G10450 78.4 1.7e-102 369.4
Hepe02g0098 . 1 238 14-3-3 family AT5G10450 67.2 9.1e-88 320.5
Hepe01g2127 . 5 236 14-3-3 family AT5G10450 67.7 4.2e-85 311.6
Hepe10g1790 . 3 239 14-3-3 family AT5G10450 65.4 6.1e-84 307.8
Hepe10g0497 . 5 236 14-3-3 family AT5G10450 66.0 1.0e-83 307.0
Hepe10g0578 . 3 239 14-3-3 family AT5G10450 65.4 5.2e-83 304.7
Hepe01g2137 . 1 203 14-3-3 family AT5G10450 74.5 1.1e-80 297.0
Hepe02g0894 . 4 241 14-3-3 family AT3G02520 91.6 2.3e-120 428.7
Hepe10g0481 . 9 262 14-3-3 family AT3G02520 85.1 1.4e-117 419.5
Hepe10g0409 . 10 248 14-3-3 family AT3G02520 74.9 7.2e-98 354.0
Hepe10g0578 . 8 257 14-3-3 family AT3G02520 69.4 7.0e-93 337.4
Hepe10g1790 . 8 256 14-3-3 family AT3G02520 68.5 2.0e-92 335.9
Hepe01g2137 . 5 203 14-3-3 family AT3G02520 86.4 2.6e-92 335.5
Hepe10g0497 . 1 249 14-3-3 family AT3G02520 69.4 4.5e-92 334.7
Hepe02g0098 . 4 238 14-3-3 family AT3G02520 72.2 1.3e-91 333.2
Hepe01g2127 . 1 241 14-3-3 family AT3G02520 70.0 2.7e-89 325.5
Hepe10g0409 . 9 246 14-3-3 family AT5G65430 87.4 1.6e-113 406.0
Hepe10g0481 . 11 245 14-3-3 family AT5G65430 80.5 1.0e-104 376.7
Hepe02g0894 . 7 243 14-3-3 family AT5G65430 79.0 8.6e-104 373.6
Hepe02g0098 . 1 238 14-3-3 family AT5G65430 69.3 1.2e-89 326.6
Hepe01g2127 . 5 236 14-3-3 family AT5G65430 69.4 2.1e-86 315.8
Hepe10g1790 . 8 239 14-3-3 family AT5G65430 68.9 3.6e-86 315.1
Hepe10g0497 . 5 236 14-3-3 family AT5G65430 67.7 2.4e-85 312.4
Hepe10g0578 . 8 239 14-3-3 family AT5G65430 68.5 2.0e-84 309.3
Hepe01g2137 . 1 203 14-3-3 family AT5G65430 76.0 9.3e-82 300.4
Hepe02g0098 . 1 261 14-3-3 family AT2G42590 81.7 2.2e-118 422.2
Hepe01g2127 . 3 245 14-3-3 family AT2G42590 76.1 4.5e-103 371.3
Hepe10g1790 . 6 257 14-3-3 family AT2G42590 73.9 1.7e-102 369.4
Hepe10g0578 . 6 253 14-3-3 family AT2G42590 75.0 2.3e-102 369.0
Hepe10g0497 . 4 242 14-3-3 family AT2G42590 75.7 2.1e-100 362.5
Hepe10g0481 . 11 251 14-3-3 family AT2G42590 70.1 6.8e-91 330.9
Hepe02g0894 . 8 241 14-3-3 family AT2G42590 74.8 8.9e-91 330.5
Hepe10g0409 . 11 248 14-3-3 family AT2G42590 64.7 3.7e-81 298.5
Hepe01g2137 . 8 203 14-3-3 family AT2G42590 66.8 5.2e-67 251.5
Hepe10g0497 . 1 241 14-3-3 family AT1G22300 78.8 1.9e-103 372.5
Hepe02g0098 . 6 242 14-3-3 family AT1G22300 78.1 2.0e-102 369.0
Hepe10g1790 . 5 244 14-3-3 family AT1G22300 76.7 3.0e-101 365.2
Hepe10g0578 . 5 244 14-3-3 family AT1G22300 76.3 5.0e-101 364.4
Hepe01g2127 . 1 241 14-3-3 family AT1G22300 76.3 2.1e-99 359.0
Hepe02g0894 . 8 245 14-3-3 family AT1G22300 71.0 5.8e-89 324.3
Hepe10g0481 . 11 249 14-3-3 family AT1G22300 69.9 1.7e-88 322.8
Hepe10g0409 . 11 248 14-3-3 family AT1G22300 64.7 3.2e-79 292.0
Hepe01g2137 . 8 203 14-3-3 family AT1G22300 66.3 9.0e-66 247.3
Hepe02g0098 . 6 246 14-3-3 family AT1G34760 81.3 5.2e-106 380.9
Hepe10g0578 . 5 245 14-3-3 family AT1G34760 80.9 2.2e-104 375.6
Hepe10g1790 . 5 247 14-3-3 family AT1G34760 79.8 2.2e-104 375.6
Hepe10g0497 . 1 245 14-3-3 family AT1G34760 77.1 6.0e-102 367.5
Hepe01g2127 . 1 244 14-3-3 family AT1G34760 77.9 2.1e-99 359.0
Hepe10g0481 . 11 248 14-3-3 family AT1G34760 71.4 9.9e-89 323.6
Hepe02g0894 . 12 241 14-3-3 family AT1G34760 73.9 2.2e-88 322.4
Hepe10g0409 . 11 247 14-3-3 family AT1G34760 63.7 4.6e-78 288.1
Hepe01g2137 . 8 203 14-3-3 family AT1G34760 67.3 6.9e-66 247.7
Hepe10g1790 . 2 254 14-3-3 family AT1G26480 86.6 1.3e-118 422.9
Hepe10g0578 . 2 254 14-3-3 family AT1G26480 85.8 8.3e-118 420.2
Hepe02g0098 . 3 242 14-3-3 family AT1G26480 80.8 3.8e-107 384.8
Hepe01g2127 . 3 242 14-3-3 family AT1G26480 77.5 7.0e-101 364.0
Hepe10g0497 . 2 249 14-3-3 family AT1G26480 72.6 2.3e-99 359.0
Hepe10g0481 . 11 263 14-3-3 family AT1G26480 72.0 1.4e-93 339.7
Hepe02g0894 . 5 241 14-3-3 family AT1G26480 73.8 5.6e-90 327.8
Hepe10g0409 . 11 244 14-3-3 family AT1G26480 65.8 1.2e-79 293.5
Hepe01g2137 . 8 203 14-3-3 family AT1G26480 69.9 1.6e-68 256.5
Hepe10g1790 . 5 237 14-3-3 family AT1G78220 52.1 5.7e-65 244.6
Hepe02g0098 . 6 236 14-3-3 family AT1G78220 51.3 8.2e-64 240.7
Hepe10g0578 . 5 237 14-3-3 family AT1G78220 51.3 9.1e-63 237.3
Hepe01g2127 . 1 234 14-3-3 family AT1G78220 50.6 1.0e-61 233.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000281 3 7 3 4 1 5 6 5 5 3 5 5 6 5 5 5 5 6 6 5 5 5 5 4 4 5 4 9 8 4 148