Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2137 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCCAAGCTTGCCGAGCAAGCCGAGCGCTACGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCGCCGCCACTGACAACGACGAACTCACCGTCGAGGAGCGTAACCTTCTCTCTGTTGCTTACAAGAATGTTATTGGTGCTCGTAGAGCCTCCTGGAGGATCATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGTAACGATGATCATGTCTCCGTCATCCGTACTTACAGATCCAAGATCGAGACCGAGCTCTCTGACATCTGTGATGGCATCCTTAAGCTTCTTGACACTCGCCTCATTTCCTCCGCTGCTTCTGGTGATTCCAAGGTCTTTTATCTCAAAATGAAGGGCGATTATCATAGATATCTCGCTGAGTTCAAGACCGGAGCCGAGAGGAAGGAAGCCGCCGAAAGTACCCTCACTGCTTATAAATCTGCTCAGGATATTGCCAATTCTGAACTCGCTCCTACTCACCCCATACGACTTGGGCTGGCCTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGAGCTTGCAGCCTTGCCAAACAGGTTACTCGAATATATTGCGTGCTCTTCTTTCTTATCCCGAAGCTAGTGATATACAAAGCCACATTTCCTTATTCCCCTGATTGA 693 49.49 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAATDNDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRTYRSKIETELSDICDGILKLLDTRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQVTRIYCVLFFLIPKLVIYKATFPYSPD 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 86024202 86028445 + Hsped.01g21370.1 Hepe01g2137 561247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2137 230 PIRSF 2014/3/3 2 207 IPR000308 -
Hepe01g2137 230 Coils Coil 14 34 - -
Hepe01g2137 230 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Hepe01g2137 230 Gene3D - 1 208 IPR036815 -
Hepe01g2137 230 SUPERFAMILY 14-3-3 protein 7 205 IPR036815 -
Hepe01g2137 230 SMART 1433_4 8 230 IPR023410 -
Hepe01g2137 230 PANTHER 14-3-3 PROTEIN 8 204 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Hepe01g2137 230 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Hepe01g2137 230 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Hepe01g2137 230 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Hepe01g2137 230 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Hepe01g2137 230 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Hepe01g2137 230 Pfam 14-3-3 protein 14 204 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2137 Hepe-Chr1:86024202 Hepe02g0894 Hepe-Chr2:10714780 3.62e-116 dispersed
Hepe01g2137 Hepe-Chr1:86024202 Hepe10g0409 Hepe-Chr10:4563580 3.72e-96 wgd
Hepe01g2137 Hepe-Chr1:86024202 Hepe10g0481 Hepe-Chr10:5581578 4.57e-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2137 K06630 - csv:101210822 383.645