Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2167 ATGTTCCCAAAGCCCCACCACCAACCACCGCCCCATTCTCAACCTTTTCCCCGTTCCTTTTCCGTCGCCGCCGCCGATGACGAATCCGCCGCCGCCCCCTCCCTTCTCACTCACGCCATGCTCCCCAAAGAACCTACCTCCGTCGGCGACGGAGCTTCCATCGAGGTCGTCCGGCGCCCCCGCGGCCGCCCGCCGGGATCCAAGAACAAGCCGAAGCCAGCCACCGTCGTCGTCGCCGCCCGCGACGCCGAGCCGGCGATGAGTCCTTATGTACTCGAAGTCCCCGGCGGTAGCGACATCATCGATGCGATTTCCCGATTTTGCCGCCGCAGAAACACAGGGCTCTGTATTCTCAACGCTTACGGAACCATCGCTGACATCAGTCTCCGGCAGCCGTCTTCATCAACGGCGGCGACCGTCACTTTCCATGGACTATTCGATATCCTCTCCGTCTGCGCCACTTTTGTTCCTCATACGATTTCGTTTCCGGTTCCTAACGGATTCACCATCACGCTAGCGGGGCCGCAGGGCCAGATCTTCGGCGGATTGGTCGCCGGAGCTTTAACCAGCGGCGGAACCGTCTATGTAATAGCCGCTTCATTCAACAATCCGTCGTATCAGCGGCTACCGTCAGATGATGAAGTCAGAAAATTAGCCTTCAGCGACGTCGAAGAAGGTCAGTCTCCGCCGATCTCCGGCGGAAAAGATAGCGAAAACACAACCGCCGCAGAGACCTGCGGGCTGTTGCCGATGTACAGCAATCACTCGTCCTCCGACGTAATATGGGCTCCCGCCGCTAGACAACCGCCGCTGCCGCAGCCGCAGCAGCAGCAGCACCGCCAGTACTAA 849 60.07 MFPKPHHQPPPHSQPFPRSFSVAAADDESAAAPSLLTHAMLPKEPTSVGDGASIEVVRRPRGRPPGSKNKPKPATVVVAARDAEPAMSPYVLEVPGGSDIIDAISRFCRRRNTGLCILNAYGTIADISLRQPSSSTAATVTFHGLFDILSVCATFVPHTISFPVPNGFTITLAGPQGQIFGGLVAGALTSGGTVYVIAASFNNPSYQRLPSDDEVRKLAFSDVEEGQSPPISGGKDSENTTAAETCGLLPMYSNHSSSDVIWAPAARQPPLPQPQQQQHRQY 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 86318728 86320022 - Hsped.01g21670.1 Hepe01g2167 561277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2167 282 CDD DUF296 89 201 IPR005175 -
Hepe01g2167 282 FunFam AT-hook motif nuclear-localized protein 88 219 - -
Hepe01g2167 282 MobiDBLite consensus disorder prediction 1 74 - -
Hepe01g2167 282 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 202 IPR005175 -
Hepe01g2167 282 ProSiteProfiles PPC domain profile profile. 84 224 IPR005175 -
Hepe01g2167 282 MobiDBLite consensus disorder prediction 1 16 - -
Hepe01g2167 282 Gene3D - 88 223 - -
Hepe01g2167 282 MobiDBLite consensus disorder prediction 232 261 - -
Hepe01g2167 282 MobiDBLite consensus disorder prediction 222 282 - -
Hepe01g2167 282 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 213 - -
Hepe01g2167 282 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 43 249 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2167 Hepe-Chr1:86318728 Hepe03g0464 Hepe-Chr3:7115765 1.78e-44 dispersed
Hepe01g2167 Hepe-Chr1:86318728 Hepe10g0420 Hepe-Chr10:4705638 9.33e-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2167 - - - 0.0