Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2174 ATGGCTCCAGAATTCCTTCGTGGAGAGCCTTCAAATGAAAAGTCTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGGGGACTTGGTCCGGCTCAGGTTGTGGGAGCAGTCGCTTTCCAGAATAGAAGACTTACTATCCCATCAAGCACTTCCCCGTTGTTATCTTCCCTTATTGAAGCTTGCTGGGCAGATGCTCCTGCTCAGCGTCCATCCTTTACAAGCATAGTCGAGTCGATAAAAAAATTGCTGAAATCTCCACAGCAGTTGATAGCAATGGGTGTAAAGTGA 315 46.67 MAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWRGLGPAQVVGAVAFQNRRLTIPSSTSPLLSSLIEACWADAPAQRPSFTSIVESIKKLLKSPQQLIAMGVK 104
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 86381103 86382038 - Hsped.01g21740.1 Hepe01g2174 561284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2174 104 PANTHER SERINE-THREONINE PROTEIN KINASE 1 92 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe01g2174 104 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Hepe01g2174 104 Pfam Protein tyrosine and serine/threonine kinase 1 87 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g2174 104 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2174 104 SUPERFAMILY Protein kinase-like (PK-like) 1 86 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2174 Hepe-Chr1:86381103 Hepe04g1005 Hepe-Chr4:64668992 7.36e-35 dispersed
Hepe01g2174 Hepe-Chr1:86381103 Hepe05g0338 Hepe-Chr5:4127975 5.74e-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72495 PF07714 PK_Tyr_Ser-Thr 4.40E-20 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2174 - - - 0.0