Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2175 ATGCCGCATAGAACGACTTACTTCTTCCCCAGGCAATTTCCGGATCGCAGATTTGACTCGGCGTCAACTTCCAAACAGATTTTGGATCACGAGAGGAAAATCAACAAAGAAACTTTTAGTACCGAAAGCGACGCGAAACCGACCCCGCAGGCTGCGCGCGGTTTTAATGTCAGGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGAACAAGGCTCAAAGCAATAAGAAACGGCCTGCTTTTTACCATTGGTTGGTGGACAAGAAAGCAACGCGATCGGCAACTTCTCACGTGAAAACTTGGCTTTCCAATTGCGATGAGGACCGCGAGCTTTTGCTTCCGCCACCTTCTTCGGAGCCGGACCACGATACAACGTCGGTTAATGATCGGAATGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCGAGCGGGAGTAGCTATGCCGGGAGTTTGTTTTCAGGCACGGGAACCGGGACGGTGGATGGAAATTTTTCCAGCGACGTTAAGGATTCATCGGCGTCAAAGATCTTGTCCTCGCACACGGCGAGGCGGGAAGAGATTGAAATTGGAGATTGTAAGGAAAGCCTAGCACAGAAAGCGACAGAGAGTTACTGCCTGCAGCTTGCTTTGGCTGCATCGCTTCGTTCCCATGCTAATCTCGCTGGCGAGCCTGTGCTCATGAAGGAAGGCAGGGTGGAAATTACGGACGCTGAAACTGTTTCGTATCGACTTTGGGTAAGTGGTTGCCTGTCTTACTCCGACAAAATATCAGATGGTTTCTACAATATTTTGGGTATGAATCCGTATCTCTGGGTTATGTGCAATGATTTTGAGGAAGGTAGACGGCTACCACCTCTGATGTCGCTTAGAACCATTGAACCAAGTGATTCGTCAATGGAGGTGGTTCTTGTCGATAGACGCGGCGATTCTCGACTGAAAGAGCTTGAAGACAAAGCACAAGAACTATTTTGTGCTTCAGAGAGCACCTTAGTGTTGGTGGAGAAACTAGGAAAACTTGTTGCAATCTACATGGGGGGCACATTTCCAGTGGAGCAGGGGGGGTTGCACCTTCACTGGAAAGTGGTGAGCAAAAGATTGAGGGAAGTTCAGAAATGCATTGTTCTTCCAATTGGTAGTCTTTCTATGGGACTATGCCGGCACCGTGCAATCCTTTTCAAGAAACTGGCAGATTATATAGGTTTGCCATGTCGGATAGCAAGAGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCACAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCAGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCTTCAATGCCTTCACCACTCCACATATCTCATTTAAAAGAGTTTCAAGAACCTTACGTGGAAAGTTATTTAAGCAGTCAAACTGTTGGGTCAAAGCAAGCCTATGGTTTTCCTGAAAATCATTTACATTCAGGTTTTGGAGAACACCAGATGAAAGGGGGGAGCACTTTGCATAAAAATTCAGGGGCTGAAACTGATAAATTGATTGATCAAATTCGTATGGGTATGAGATCATCTCAATTGTGTTTGGAAACAAAAGTGAGAAAGGAGTGTGTGCTTCAGACTCATATAATGCCATCGACTGACGCTGATGCCTCTGAGGTGTTAGGTTCTGTTGCTGGTGCATCTTTACATGAAAACAAAGTTGTCATTGAAGAAATACACCGAGAAAAGGCAGTTGTGGCGGGGATTTCACTGAATGAAACTAGCATTAATCTTTCCAAATTAAGCATATCAACTCAAACTGATTCAAAAGCGGTTTTGGGTAGGTCTCAAAATTTTTCAGCATCAGATTATCCAGAATATCTGGAACTTGAACCATCACTTGCAATGGATTGGCTGGAAATTTCATGGGATGAATTACATATAAAGGAGCGTGTTGGAGCTGGCTCATTTGGTACAGTGCACCGGGCTGAATGGCACGGATCGGATGTTGCTGTCAAGGTTCTAACCGTGCAGGATTTCCTTGATGATCAGTTGAGAGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTCCGCCATCCAAATGTGGTACTTTTCATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAATATCTGCCGAGGGGTAGTCTATACCGCCTAATTCATAGGCCATCTTCTGGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCGTTGGATGTGGCCAAGGGAATCAACTACCTACATTGTCTCAATCCTCCCATAGTACACTGGGACCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACAGTGAAGGTTTGTGATTTTGGGTTGTCCAGATTCAAAGCAAACACTTTCATATCATCGAAATCTGTAGCTGGAACAGTTAAAATTTTACTCGGCCGTGCATCAATCAGTAGCATGTAA 2496 44.99 MPHRTTYFFPRQFPDRRFDSASTSKQILDHERKINKETFSTESDAKPTPQAARGFNVRKSSAVSDLFTGNKAQSNKKRPAFYHWLVDKKATRSATSHVKTWLSNCDEDRELLLPPPSSEPDHDTTSVNDRNVDRNFDRQVSLPRVSSGSSYAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHTARREEIEIGDCKESLAQKATESYCLQLALAASLRSHANLAGEPVLMKEGRVEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNDFEEGRRLPPLMSLRTIEPSDSSMEVVLVDRRGDSRLKELEDKAQELFCASESTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREVQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVTIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGFQSSMPSPLHISHLKEFQEPYVESYLSSQTVGSKQAYGFPENHLHSGFGEHQMKGGSTLHKNSGAETDKLIDQIRMGMRSSQLCLETKVRKECVLQTHIMPSTDADASEVLGSVAGASLHENKVVIEEIHREKAVVAGISLNETSINLSKLSISTQTDSKAVLGRSQNFSASDYPEYLELEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFLDDQLREFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTVKILLGRASISSM 831
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 86382069 86388747 - Hsped.01g21750.1 Hepe01g2175 561285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2175 831 SMART serkin_6 655 831 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2175 831 Pfam Protein tyrosine and serine/threonine kinase 655 807 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g2175 831 PANTHER SERINE-THREONINE PROTEIN KINASE 217 819 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe01g2175 831 ProSiteProfiles Protein kinase domain profile. 655 831 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2175 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g2175 831 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524(InterPro)
Hepe01g2175 831 FunFam Serine/threonine-protein kinase isoform 1 645 733 - -
Hepe01g2175 831 SUPERFAMILY Protein kinase-like (PK-like) 631 819 IPR011009 -
Hepe01g2175 831 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Hepe01g2175 831 Gene3D Phosphorylase Kinase; domain 1 648 732 - -
Hepe01g2175 831 Gene3D Transferase(Phosphotransferase) domain 1 734 822 - -
Hepe01g2175 831 CDD STKc_MAP3K-like 661 819 - -
Hepe01g2175 831 MobiDBLite consensus disorder prediction 109 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2175 Hepe-Chr1:86382069 Hepe04g1005 Hepe-Chr4:64668992 1.07e-148 dispersed
Hepe01g2175 Hepe-Chr1:86382069 Hepe05g0338 Hepe-Chr5:4127975 6.77e-152 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72496 PF14381 EDR1 8.20E-76 CL0125 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2175 - - - 0.0