Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g2191 | ATGGAGTTTAATGAAGACTATTTGTTAGATGAAGTTTTATGTTTGAGAAGAGAGATGAATTGGGAATTAGCAATGCCCACACCTACAGAAATGAATGGCTGGAATTTTGATTCCTCTGATTCTTCTTCTGCAGCATTCTCTTTACCAATTGAACAGCAGAATCTCAATTACCTTCTCACTGGGCATGCTCAGTATTCTTTGCCCGGCGACCACTTCACGCCGCCGCCGCCGTCGAGTAGTTTTGAGGTCATTTATAATCCGATTACGGAACTTGGGATTTTGGAGGATGAGATTCATAATCTTGAAGTTCAGGCTACTTGTAAAATTGAGCCTACTGTTCATTCTCCTCAAATTATCCCAATTTTCAACACCGCCGCCACCTGCGATTTTGCCCAAAAATTCGTCAATTCGAATAAGAAACTTTCGGTTCAGGGGAAGCCGTCCAAGAATCTCATGGCGGAGAGACGGCGGAGGAAGCGCCTCAACGATCGACTCTCCATGCTCAGATCTATTGTCCCCAAAATTAGCAAGATGGATAGAACTGCGATTTTGGCGGATGCAATTGATTACGTGAAGGAATTGGTGGAGAAAATCAACAATTTACAAAGGGAAATTGAAGTGGTGAATAATCCGATTTATAAGATGGAGTCCATGGGGATTTTGAGAGACGTGAAACCAAATGAATATTTCGTCAGAAATTCTCCTAAGTTTCATGTGGAAAGGAGAGAAATGGGCAGTGGGATTGAGATTTGCTGTGCGGCTAAACCAGGATTATTGTTGTCAACAGTGCAGACTCTTGAAGATTTGGGGCTTGATATTCAGCAGTGTGTCATTAGCTGTTTTAATGACTTTGCAATTCAAGCTTCTTGCTCTGAGGGAAGGGAGCACAGAACAATTATGAGCACAGGAGAAGTAAAGCAAGCATTGTTTGAAAATGCTGGATATGGAGGAAGATGCCTCTAA | 963 | 42.26 | MEFNEDYLLDEVLCLRREMNWELAMPTPTEMNGWNFDSSDSSSAAFSLPIEQQNLNYLLTGHAQYSLPGDHFTPPPPSSSFEVIYNPITELGILEDEIHNLEVQATCKIEPTVHSPQIIPIFNTAATCDFAQKFVNSNKKLSVQGKPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYVKELVEKINNLQREIEVVNNPIYKMESMGILRDVKPNEYFVRNSPKFHVERREMGSGIEICCAAKPGLLLSTVQTLEDLGLDIQQCVISCFNDFAIQASCSEGREHRTIMSTGEVKQALFENAGYGGRCL | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 86605085 | 86608114 | + | Hsped.01g21910.1 | Hepe01g2191 | 561301 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g2191 | 320 | Coils | Coil | 184 | 211 | - | - | |
Hepe01g2191 | 320 | CDD | ACT_UUR-ACR-like | 248 | 287 | - | - | |
Hepe01g2191 | 320 | Pfam | Helix-loop-helix DNA-binding domain | 152 | 194 | IPR011598 | GO:0046983(InterPro) | |
Hepe01g2191 | 320 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 138 | 315 | IPR051358 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER) | |
Hepe01g2191 | 320 | Gene3D | - | 138 | 210 | IPR036638 | GO:0046983(InterPro) | |
Hepe01g2191 | 320 | Pfam | Plant bHLH transcription factor, ACT-like domain | 242 | 309 | IPR054502 | - | |
Hepe01g2191 | 320 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 148 | 215 | IPR036638 | GO:0046983(InterPro) | |
Hepe01g2191 | 320 | SMART | finulus | 151 | 200 | IPR011598 | GO:0046983(InterPro) | |
Hepe01g2191 | 320 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 145 | 194 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2191 | Hepe-Chr1:86605085 | Hepe07g2082 | Hepe-Chr7:65083710 | 1.01e-38 | dispersed | |
Hepe01g2191 | Hepe-Chr1:86605085 | Hepe10g0404 | Hepe-Chr10:4507374 | 5.99e-97 | wgd | |
Hepe01g2191 | Hepe-Chr1:86605085 | Hepe04g1377 | Hepe-Chr4:69436800 | 3.72e-80 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54894 | PF00010 | HLH | 6.00E-10 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g2191 | - | - | - | 0.0 |