Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2195 ATGGCCGGAGTTCTCAGAGAGAGAGCACTGTCTCTCCTCGCCGCCGCTAACAACCACGGCGATTTAACGGTAAAAATTTCATCTTTGAAGCAGGTAAAAGATATCATACTGTCCATCGAGCCATCTTTTGCAGCAGAACTCTACTCCTACTTGGTCGAGCTTCAGTCCTCCCCCGAGAGCTTACTACGTAAATTGTTAATTGAGGTGATTGAAGACATTGGATTAAGAGCCATGGATCATTCTCCTCTGTTAATGTCGGTTTTGGTAGCATCTTTAAAGGACGAAGACTCTATTGTAGCTGGACAATCAATTATCAGCGGCCAAAAATTATTTTGTGGTACTTTAAGAGAGATGACATTTCAGTTCCATCGGCGAGGTAAAGTTGAAAGATGGCTTGAAGAACTGTGGATGAGAATGTTGAAGTTTAAAGATGATGTTTTTGCAATTGCTATAGAGCCTGGTTCTGTTGGGAAGAGGTTGCTGGCTTTGAAATTTTTGGAAACATATGTTCTACTTTTTACGTCCGATACAAATGATCCACAAAAAGCTGTCTCAGAAGGAAATGGGGATGTTTTTAACATTTCATGGCTAGCTGGTGGTTTTCCTATCTTGGATCCAGTTGGGCTAATGTCGGAAGCTAATAGGATGCTTGGTATTCTGTTGAATTTGTTGCAGACCAGTTCTGTTCCTGGTACATATACAGTAACAGTTGTCAGTAGTTTAGCAGCTATAGCAAGGAAGAGACCTGTTCATTATGGTAACATTCTATCAACGCTACTGGAATTTGTTCCAAGTTTTGAGATGGTAAAAGGGCGTCATGCTGCCAGCATTCAGTATTCTATAAGATCTGCCCTTTTGGGATTCTTAAGGTGTTTGCATCCAGCTTTTGTAGAGTCAAGAGATAGATTGCTAAAGGCTTTAAGAGCTGTAAATGCTGGAGATGCTGCAGATCAAGTAATCAGGCAAGTGGACAAAATGGTGAAAGCTGCAGATCGAGCTTCACGTGATGCTTGGCTGGGCAAGGATGATCAATCATCAAATCATCTTAATGCATCAGTGGATCTAACAAGAAAAAGACCTAGGCTTCTCGACGATGAAGAACTTTCCAATGGTCGTGAGGTTTCCAAGCAAATTCGCTTTGGTCCGGATGTTCACCTAATTTCCCCAGCTCAAAAAGATGGCTCTCTGCAGAATGCCATCTCTAATGGGACATCCCCTGATATTCCTCCGTTAGATGTTGAATTGACTCCTGCAGAACAGATGATTGCAATGATTGGTGCCTTACTTGCAGAAGGGGAGCGAGGTGCAGAATCACTTGAAATTCTGATTTCAAATATTCATCCTGACTTGTTGGCAGATATTGTCATAACTAACATGAAGAACTTGCCCAAAGCCTCCCCTCCTTTAAATTGGCATGGGGACTTGCCTGTAAGTCGTCAAGGAAGTAATCATGTGCAGGTTCCGGCTCCATCAGCCTCATTGAGTTCTGTGCAAACTTCAGTTGCTACTGCACAAGTTCCATTTTCTTTGGCCACCTCAGCTGGTTCAACTTTCGCTGAGTCTACTGTCAATAGTCTCCCTGTTGATTCCAAACGTGATCCAAGAAGGGATCCCCGTCGCCTTGATCCTCGCCGTGGAGTATCTTCTGCTTCTAGTGTGGAAGAGGCAACTTCAAATATATCTGATGTTGATGGCTCCATATCTTTGGGAAAATCTGCTTCGGTTCCTGTTTCTGTGACGATGGAGAATTCCTCGGTATCTTTTTTATCAAAAACAAAAGTCGAAGAAAAAATCATAGAGACTCCATTTGTGTTTGGAACAGACCCATCAACCCCCAAATCAAAATCTCCTGATAGAGCTGCGAAAATTGACACTATATTTGAGATTAATGCCCCTCTGGATCCCATGCCTTCTGCTGTTGGAAAAGCTGATGAGGGTTTGGTTGCAGTTAATTTGTTCGAGGACTCAGCAACAAAGAGGGATGATACATCATCTTCCATAGAATACAATCAGTATTCTCCATCAGTTACGAATGCAGCTCTATCTGAAGATACCTGTGAGGAGTTGCCTCTGCTTCCACCGTATGTTGACTTAACTCCAGAACAGCAAATAACTGTAAGAAATTTGGCAGCTGAAAAGATATTTGATTCATGCAAGAATTTAAATGGGGCAGAGTGCCATCAGATACGCTTGGCGATAATTGCTCGATTGGTTGCTCAGGTTGATGCAGATGATGATATTGTTGGAATGTTGGAAAAGCATGTTGCTATTGATTACCAACAGCAAAAGGGGCATGAGCTTGCTTTGCATGTCTTATATCACCTGCATTCACTTGATATTCTGGATTCAGTGGAAAGTTCTTCTTCCATTGCTGTGTACGAAAAGTTTCTTCTAGTCGTGGCTAAATCGTTGCTAGATTCTTTTCCAGCTTCAGACAAATCTTTTAGTAGACTTCTTGGTGAAGTTCCAGTTTTACCTGACTCTACATTGGAACTATTACATAACCTTTGCTATTGTGATTTTACTGACAACCATGGGAAGGATACTCCTGATATTGACCGTGTCACGCAAGGCCTTGGCACTGTTTGGAATTTGATTGTGAAGCGTCCATATAGTCGGCAAGCTTGCTTAGATATTGCTCTAAAGTGTGCTATGCATTCAGAAGTTAAGGTTCGAGCAACAGCTATTAGACTGGTGGCAAACAAACTCTACCGGTTAAGTTACATTTCAGATAGGATTGAGCAACATGCAACAAACATGTTCCTGTCTGCAGTAGACAAGGTAGATCAGACAGATGTTGAGCCTTCACCATGTGGATCATTTGAACAAAGAACTGGAGGAGAGGGTGAGAGTCAGGAAACATCCATTTGTGGTTCTCTCGTTTCAGATCCTGGAACATCAGAAAATGATTCCATGAGGAGTTCACAACCTACAGTTCATGGCAGTTCAACCTTGTCACTTTCAGAAGTCGAAAGACAGATTTCTCTGCTTTTTGCTCTATGCGTGAAGAAACCTTGTCTGCTTCAGCTTGTATTTGATGCTTATGGACGGGCCCCTAAAGCAGTGAAAGAGGCCGTTCATGAACATATCCCTAATCTTATTACGGCTCTAGGGTCATCTGATTCTGAATTGCTTAGAATAATATCAGATCCGCCTCAAGGAAGTGAACATCTTTTAGCGTTGGTATTACAGGTTCTAACTCAAGAGACAACGCCTTCTTCTGATCTGATCGCAACTGTTAAACATTTATATGAAACTAAATTGAAGGATGTGACAATTCTCATTCCAATGCTGCCTTCACTTTCCAAAAATGAGGTTTTACCTATTTTTCCTCGGCTGGTTGATCTTCCATTGGAGAAGTTTCAGAGGGCGTTGGCTCACATACTACAGGGTTCAGCACATACACGTCCAGCTTTAACACCAGTTGAAGTATTGATCGCCATCCACAACATAATTCCTGAAAAAGATGGCCTTGCATTAAAGAAGATAACGGATGCTTGTTCAGCTTGTTTTGAGCAACGTACAGTTTTTACTCAGCAGGTCTTGGCAAAAGCCTTGAGCCATATGGTTGAACAAACTCCACTCCCTCTTCTCTTCATGAGAACTGTGATTCAGGCAATTGATGCTTTTCCTACTTTAGTTGATTTTGTCATGGAGATACTTTCCAAACTTGTAAACAGACAGGTCTGGAGGATGCCAAAATTGTGGTTCGGTTTTTTGAAATGTGCATTTCAAACACAGCCTCATTCCTTTCGAGTACTATTACGGTTACCACCGCCACAACTTGAAAATGCTTTGAACAAATATGTTAACCTTAGAGGTCCTCTTGCTGCTTATGCCAGCCAGCCCACCACAAAATCTACTCTCTCTAGACCAACGCTCGTAGTTCTGGGTCTCGAAAACGAAAGGCATTTGTAG 3918 42.09 MAGVLRERALSLLAAANNHGDLTVKISSLKQVKDIILSIEPSFAAELYSYLVELQSSPESLLRKLLIEVIEDIGLRAMDHSPLLMSVLVASLKDEDSIVAGQSIISGQKLFCGTLREMTFQFHRRGKVERWLEELWMRMLKFKDDVFAIAIEPGSVGKRLLALKFLETYVLLFTSDTNDPQKAVSEGNGDVFNISWLAGGFPILDPVGLMSEANRMLGILLNLLQTSSVPGTYTVTVVSSLAAIARKRPVHYGNILSTLLEFVPSFEMVKGRHAASIQYSIRSALLGFLRCLHPAFVESRDRLLKALRAVNAGDAADQVIRQVDKMVKAADRASRDAWLGKDDQSSNHLNASVDLTRKRPRLLDDEELSNGREVSKQIRFGPDVHLISPAQKDGSLQNAISNGTSPDIPPLDVELTPAEQMIAMIGALLAEGERGAESLEILISNIHPDLLADIVITNMKNLPKASPPLNWHGDLPVSRQGSNHVQVPAPSASLSSVQTSVATAQVPFSLATSAGSTFAESTVNSLPVDSKRDPRRDPRRLDPRRGVSSASSVEEATSNISDVDGSISLGKSASVPVSVTMENSSVSFLSKTKVEEKIIETPFVFGTDPSTPKSKSPDRAAKIDTIFEINAPLDPMPSAVGKADEGLVAVNLFEDSATKRDDTSSSIEYNQYSPSVTNAALSEDTCEELPLLPPYVDLTPEQQITVRNLAAEKIFDSCKNLNGAECHQIRLAIIARLVAQVDADDDIVGMLEKHVAIDYQQQKGHELALHVLYHLHSLDILDSVESSSSIAVYEKFLLVVAKSLLDSFPASDKSFSRLLGEVPVLPDSTLELLHNLCYCDFTDNHGKDTPDIDRVTQGLGTVWNLIVKRPYSRQACLDIALKCAMHSEVKVRATAIRLVANKLYRLSYISDRIEQHATNMFLSAVDKVDQTDVEPSPCGSFEQRTGGEGESQETSICGSLVSDPGTSENDSMRSSQPTVHGSSTLSLSEVERQISLLFALCVKKPCLLQLVFDAYGRAPKAVKEAVHEHIPNLITALGSSDSELLRIISDPPQGSEHLLALVLQVLTQETTPSSDLIATVKHLYETKLKDVTILIPMLPSLSKNEVLPIFPRLVDLPLEKFQRALAHILQGSAHTRPALTPVEVLIAIHNIIPEKDGLALKKITDACSACFEQRTVFTQQVLAKALSHMVEQTPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVNRQVWRMPKLWFGFLKCAFQTQPHSFRVLLRLPPPQLENALNKYVNLRGPLAAYASQPTTKSTLSRPTLVVLGLENERHL 1305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 86635449 86659709 + Hsped.01g21950.1 Hepe01g2195 561305

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2195 1305 Gene3D - 2 338 IPR011989 -
Hepe01g2195 1305 MobiDBLite consensus disorder prediction 933 983 - -
Hepe01g2195 1305 Pfam Symplekin/PTA1 N-terminal 98 308 IPR032460 -
Hepe01g2195 1305 MobiDBLite consensus disorder prediction 945 983 - -
Hepe01g2195 1305 Pfam Symplekin tight junction protein C terminal 1090 1268 IPR022075 -
Hepe01g2195 1305 MobiDBLite consensus disorder prediction 550 567 - -
Hepe01g2195 1305 MobiDBLite consensus disorder prediction 521 567 - -
Hepe01g2195 1305 SUPERFAMILY ARM repeat 18 1224 IPR016024 -
Hepe01g2195 1305 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 4 1303 - -
Hepe01g2195 1305 MobiDBLite consensus disorder prediction 529 544 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2195 K06100 - - csv:101202828 2268.43
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2195 Hepe-Chr1:86635449 Hepe04g0751 Hepe-Chr4:61459271 5.21e-248 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g565 Blo01g01788 . . . Bpe02g00153 . . Bma01g02573 . . Cma01g01458 . . . . . . . . . . . . . . . . . . . . . . . . . . Chy04g00180 . . . Bda11g00813 . . . . . . Cmo01g01510 . . . . . . . Bhi09g02541 Tan01g3888 . . Hepe01g2195 Mch11g0740 . . . . . . . . . . . Cme04g00208
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004558 1 4 1 1 1 0 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 2 1 1 1 1 3 2 40