Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2197 ATGTCGTCTCTACATTTTCTCTGTCTTCTCTCTCTTTTCACCTTTCTCACTCGAATCAAATCTGACGACCAGCTTCAAATTCTAACCAAACTCAAATCCAATCTCCAAAACTCAAACACCAACGTCTTCAACAATTGGGGACTCCAAAATCCCATCTGCAATTTCACTGGAATCACCTGTAATTCCAATGGCTTCGTCAAGGAAATTGACCTCTCCAAAAGGGCTTTATCTGGGCTTCTTCCTTTTCATTCCATTTGTCAATTGCAGTCATTGGAGAAGCTGGCTTTTGGGTTCAACTCCTTGCACGGTGAAGCAACCCTGGATTTGAACAATTGTGTTAAGTTGAAGTATTTGGATCTTGGTAACAATTTGTTCTCTGGATCCTTCCCTGACATACATTCTTTGAGCGAATTGGAGTATTTGTATTTGAATGTAAGTGGGTTTTCCGGGAAGTTTCCATGGAAATCAGTGGGGAATTTGACTGGTTTGATTGAGTTGAGCGTTGGGGATAACGCTTTTGACAACACTACTTTTCCTGTGGAGATCACTAATTTGAAGAAACTCAATTTGCTTTATTTGTCCAACTGCAGCTTAACAGGGGAAATTCCAAGGTCTATAGGTAATCTCACACAGCTTCTTAATTTGGAATTTGCAGACAATTATATCACCGGAAGTATCCCGGCGGAGATTGGGAACCTGCAGAATCTATGGCAGTTGGAATTCTACAACAATCAATTAACGGGGACTTTTCCAGTGGGATTAAGAAACCTAACCGGGCTTAAGAATTTCGATGCTTCCATGAATTTCATCAGTGGGGATCTATCAGAGTTGAGGTTTTTGACGAACCTCGTTACGCTGCAAATCTTTCACAACGAAATCTCCGGCGAAGTTCCGGTGGAGTTTGGTGAGTTCAAGTCGCTTGTGAATCTCTCCCTTTACACCAACAGGCTTACCGGTCCTCTTCCGCAATCGCTTGGTTCTTGGGCGGAGTTTGATTTCATTGATGCATCTGAAAATTTCTTGACGGGCTCGATTCCTCCTCATATGTGCAAGAAGGGGACGATGAAGAAGCTTCTCATTCTTCAGAACAATTTCACCGGCGAAATTCCGGCGACCTACGCTAATTGCTCCACTTTGACAAGATTCAGAGTCAGTCAGAACTCGCTCACCGGCGTCGTTCCGTCTGGAATTTGGGGATTACCGAACGTGAATATAATCGATCTTGCGTCGAATCAATTGGAAGGTTCGATCACTTCCGATATTGGAAAGGCTGCGGCTCTCTCAGAATTATACATCGGAAATAATCGATTATCAGGTCGATTGCCATTGGAGATTTCGCAAGCGAAATCTCTCGCGTCGGTCGATTTCAGCAATAATCAATTCTCCGATGAACTTCCGACGACTCTAGGCGACCTGAAGAATCTCGATAGCTTCGATTTGCAGAGCAATAAGTTCACCGGTTCGATTCCAGAGACGATCGGCTCGTGTAATTCCCTCAGTATCGTTAATCTCGCGAGAAATTTCTTCTCTGGAAAAATCCCTTCGTCTCTAGGGTTTCTTCCTGTTCTAAATTCTCTCAATCTCTCCAATAACGATCTATCCGGTGAAATCCCCTCGACATTTTCGCATCTGAAATTGAGTCTTCTCGATCTTTCCAACAATCAATTAACCGGTACGGTACCTCAATCGCTCTCGAACGGAGCTTACAAAGAAAGCTTCGCCGGAAACCCTGGCCTCTGCGGTGAGTTCGACGGCTTTTTACGGCGATGTTCACAGAGATCCGGTGCATCCAAGGACATCCGTACACTCCTCATTTGTTTCGCCGTCGGATTACTTCTTCTCACCGTGACGCTCTGGTGCTACATAACCTTGAAAAAGAGCGAAAAAGATCGAAATCGGTCGCTTAAAGAGGAATCATGGGATCTAAAATCCTTCCACGTAATGACGTTCACAGAGGACGAGATCCTCGATTCCATTAAAGACGAGAATCTCATCGGAAAAGGAGGTTCCGGCAATGTTTACAAAGTGAGCGTCGGAAACGGGAAAGAGTTCGCCGTGAAGCATATTTGGAACACCGGTCCGTACGAAGACAAGAAGAATGATAATCGGAGCTCATCGCCGATTCTGACGAAACAGAGAACGAAGTCGTCGGAATTCGACTCGGAGGTGAAGACTCTGAGCTCGATCCGCCATGTGAACGTGGTGAAGCTCTACTGCAGCATTACGAGCGAGGTTTCGAGCCTGTTGGTTTACGAATATATGCCTAATGGAAGCTTATGGGACAGACTTCACACCTCTAGAAAAATGGAGTTGGATTGGGATACAAGATACGAAATCGCCGTCGGATCAGCGAAGGGATTGGAGTATCTTCACCACGGCTGCGATCGGCCGGTGATCCACCGGGATGTTAAGTCTAGTAACATACTTTTGGATGAATTTCTCAAGCCTAGAATCGCGGATTTTGGGCTTGCCAAAATTCTCCACACGAGCGGGTTCAACGAAACCACCCAGGTCATTGCAGGCACCATCGGCTACATCGCCCCAGAGTATGGATACACATATAAAGTCGACGAGAAGAGCGACGTGTATAGTTTTGGAGTGGTGTTATTGGAGTTGGTGAGCGGGAAAAAAGCGATCGAGGCGGAGTTTGGAGAGAACAAGGACATCGTGCAATGGGTATCGAACAATTTGAAGACGAGGGAGAGTGTGTTAAGCATAGTAGATTCAAGAATTCCTGATGGGTTTAAAGAAGATGCTATAAAGGTATTGAGAATTGCAATTTTGTGCACAGCCAGGCTTCCAACGTTGAGACCCACAATGAGAAGTGTGGTTCAAATGCTTGAAGAAGCCCAACCATGTCGGCTAGTTGGAATTGTGATTAGGAAAGATGGTGGGAGTGTTAAAAAGGAATTATCTCTGGATATCAACAAGATTAGTCTCTGA 2943 44.99 MSSLHFLCLLSLFTFLTRIKSDDQLQILTKLKSNLQNSNTNVFNNWGLQNPICNFTGITCNSNGFVKEIDLSKRALSGLLPFHSICQLQSLEKLAFGFNSLHGEATLDLNNCVKLKYLDLGNNLFSGSFPDIHSLSELEYLYLNVSGFSGKFPWKSVGNLTGLIELSVGDNAFDNTTFPVEITNLKKLNLLYLSNCSLTGEIPRSIGNLTQLLNLEFADNYITGSIPAEIGNLQNLWQLEFYNNQLTGTFPVGLRNLTGLKNFDASMNFISGDLSELRFLTNLVTLQIFHNEISGEVPVEFGEFKSLVNLSLYTNRLTGPLPQSLGSWAEFDFIDASENFLTGSIPPHMCKKGTMKKLLILQNNFTGEIPATYANCSTLTRFRVSQNSLTGVVPSGIWGLPNVNIIDLASNQLEGSITSDIGKAAALSELYIGNNRLSGRLPLEISQAKSLASVDFSNNQFSDELPTTLGDLKNLDSFDLQSNKFTGSIPETIGSCNSLSIVNLARNFFSGKIPSSLGFLPVLNSLNLSNNDLSGEIPSTFSHLKLSLLDLSNNQLTGTVPQSLSNGAYKESFAGNPGLCGEFDGFLRRCSQRSGASKDIRTLLICFAVGLLLLTVTLWCYITLKKSEKDRNRSLKEESWDLKSFHVMTFTEDEILDSIKDENLIGKGGSGNVYKVSVGNGKEFAVKHIWNTGPYEDKKNDNRSSSPILTKQRTKSSEFDSEVKTLSSIRHVNVVKLYCSITSEVSSLLVYEYMPNGSLWDRLHTSRKMELDWDTRYEIAVGSAKGLEYLHHGCDRPVIHRDVKSSNILLDEFLKPRIADFGLAKILHTSGFNETTQVIAGTIGYIAPEYGYTYKVDEKSDVYSFGVVLLELVSGKKAIEAEFGENKDIVQWVSNNLKTRESVLSIVDSRIPDGFKEDAIKVLRIAILCTARLPTLRPTMRSVVQMLEEAQPCRLVGIVIRKDGGSVKKELSLDINKISL 980
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 86678875 86682233 + Hsped.01g21970.1 Hepe01g2197 561307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2197 980 Gene3D Phosphorylase Kinase; domain 1 642 753 - -
Hepe01g2197 980 FunFam Receptor-like protein kinase HAIKU2 642 753 - -
Hepe01g2197 980 SUPERFAMILY L domain-like 398 566 - -
Hepe01g2197 980 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Hepe01g2197 980 Gene3D Ribonuclease Inhibitor 21 177 IPR032675 -
Hepe01g2197 980 SMART serkin_6 659 947 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2197 980 SUPERFAMILY L domain-like 182 442 - -
Hepe01g2197 980 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 467 588 - -
Hepe01g2197 980 FunFam Receptor-like protein kinase 7 105 354 - -
Hepe01g2197 980 FunFam Inactive leucine-rich repeat receptor-like protein kinase 372 466 - -
Hepe01g2197 980 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 754 958 - -
Hepe01g2197 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 950 IPR050647 -
Hepe01g2197 980 ProSitePatterns Protein kinases ATP-binding region signature. 665 687 IPR017441 GO:0005524(InterPro)
Hepe01g2197 980 ProSiteProfiles Protein kinase domain profile. 659 954 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2197 980 Pfam Leucine Rich Repeat 523 544 IPR001611 GO:0005515(InterPro)
Hepe01g2197 980 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515(InterPro)
Hepe01g2197 980 Pfam Leucine Rich Repeat 114 131 IPR001611 GO:0005515(InterPro)
Hepe01g2197 980 Pfam Leucine Rich Repeat 546 566 IPR001611 GO:0005515(InterPro)
Hepe01g2197 980 Pfam Leucine Rich Repeat 474 496 IPR001611 GO:0005515(InterPro)
Hepe01g2197 980 Pfam Leucine Rich Repeat 450 472 IPR001611 GO:0005515(InterPro)
Hepe01g2197 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g2197 980 Pfam Protein kinase domain 661 945 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2197 980 Gene3D Transferase(Phosphotransferase) domain 1 754 955 - -
Hepe01g2197 980 SUPERFAMILY Protein kinase-like (PK-like) 646 948 IPR011009 -
Hepe01g2197 980 Gene3D Ribonuclease Inhibitor 178 276 IPR032675 -
Hepe01g2197 980 Gene3D Ribonuclease Inhibitor 277 598 IPR032675 -
Hepe01g2197 980 SUPERFAMILY L domain-like 53 227 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2197 Hepe-Chr1:86678875 Hepe02g0674 Hepe-Chr2:7414087 1.58e-186 dispersed
Hepe01g2197 Hepe-Chr1:86678875 Hepe01g2198 Hepe-Chr1:86694398 2.78e-103 tandem
Hepe01g2197 Hepe-Chr1:86678875 Hepe10g0394 Hepe-Chr10:4328805 6.35e-53 wgd
Hepe01g2197 Hepe-Chr1:86678875 Hepe04g1361 Hepe-Chr4:69236277 4.22e-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72497 PF00069 Pkinase 2.40E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2197 - - - 0.0