Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2198 ATGGCTCTCCTTTTCTACTTCTTCTTTCTTTTCTCCTTGATTTCTCTGGCCATCGGAAATGATGACCAATCTCAATTCTTCTCTCTGATTCAAAAGGGTGTCATCGGAAACTCTCTGCCGTCCGATTGGAGTGGAAATTCGGTCTGTAATTTCACCGGCGTCGCCTGTAATGAGAAGGGTTTGGTGGTCGGAATTGATCTCGCCGGTCGGGTGGTTTCCGGGAGGTTTCCGGCGGATGTGTGTTCTTATTTGCCGGACTTGAGACTGCTCCGTCTTGGCCGGACTGGCTTACGTGGAACCTTTCCACGTGGCGTAACCAATTGCTCTGTTTTGGAAGAGCTGGACATGAGTGCTCTGTCTCTGACTGGGACGCTGCCGGATTTCTCGCCGTTGAAGAATTTGAGGGTTCTCGATTTGTCGTACAACAACTTCACCGGCGACTTCCCGTTGTCGGTATTCAGTCTGACGAATCTCGAGAAGCTGAATTTCAACGAGGATAGCAATTTCAACACGTGGCAGTTGCCGGAGAGTATCTCCGGGCTGACGAAGCTGAAATCGATGGTGTTGACGACTTGTATGCTTGCAGGGAAAATTCCGGCGACGATTGGGAACATGACGGGGCTCGTCGACCTCGAATTAAGCGGTAATTTCCTCGCCGGAAAAATACCGAAGGAAATCGGGAATCTGAAGAATTTGAGAGAGCTGGAGCTTTATTACAATTCATTAGTAGGGGAAATTCCAGAAGAGCTTGGGAATTTGACTGAGCTCGTTGACTTGGACATGTCGGTCAACAAATTGACCGGGAAACTTCCAGAGTCGATTTGTCGTCTTCCTAAGCTCGAAGTTCTTCAGCTTTACAACAATTCACTAACAGGAGAGATTCCAATTTCGATTTCGAATTCAACCACGCTCACTATGTTATCCCTTTACGACAATTACATGACGGGACTAGTTCCAAGTAATTTGGGTCAATTCTCGCCGATGGTCGTTCTCGACTTGTCGGAAAATTATTTCTCCGGTCCGTTACCGACGGATGTCTGTGGAGAAGGTAAGTTGATGTACTTTCTCGTCTTGGAAAATAAATTCTCCGGTGAAATCCCGCCGTCGTACGGTAATTGCCTGTCGCTTTTACGGTTTCGTGTCAGTTCGAATGTTTTGGAAGGCCCGGTGCCGGCGGGGCTTCTGGGTCTTCCTCATGTTTCGATTATTGATTTCGGTAACAACAAATTGAGCGGCGAAATTCCGAATTCCTTTGTGAAAGCGAGGAATCTCTCGGAATTGTTCATGCAGGGGAATAAAATTTCCGGCACGTTGCCGCCGGAAATTTCCAAAGCGACGAATTTAGTGAAGATTGATCTCAGCAACAATCTGTTCACCGGTCCAATTCCTTCTGAAATTGGGAATCTCAAGAGGCTTAATCTGCTGCTTTTGCAAGGAAATCACCTGAATTCTTCAATACCCACTTCGCTTTCTGAGCTTAAATCTCTGAATGTTCTTGATTTATCCGAGAATAAATTAACCGGCAACATCCCAGAAAGCCTCTGCCAATTATTGCCGAATTCAATCAATTTCTCAAACAATCAACTCTCCGGTCCAATTCCCCTGTCTCTAATCAAAGGTGGGTTAGTGGAAAGCTTCTCCGGCAACCCGGGACTGTGCGTTTCGGTTTATTTAGATTCCTCCGATCAAAAATTCCCAATCTGTCCTCAAAACTACAACAAAAAACGGCTGAATTCCATCTGGGCAATCGGGGTATCGGCGTTCATAATCTTCATCGGAGCTGCTCTGTATCTAAAACGGCGATTGAGCAGAGAGAAATCATTAACAGAACACGAGGAGACATTATCGTCATCATTCTTCTCATACGACGTGAAAAGCTTCCACCGAATCAGCTTCGACCCGAGAGAGATAATCGAATCGATGGTGGACAAGAACATCGTGGGGCAGGGGGGGTCCGGCACGGTGTACAAAATCGAGTTAGGCAGCGGGGAGATGGTGGCGGTTAAGCGGCTGTGGAGTCGAAAAGGGAAGGATCCGACGTCGGATCAGGAGCAGTTGTATATGGACAAAGAGCTGAAAACGGAAGTGGAAACATTGGGGAGTATAAGGCATAAGAACATAGTGAAATTGTATTGCTATTTCTCGAGCTTGGATTGTAGCCTTTTGGTTTATGAGTATATGCCGAATGGGAATTTGTGGGACGCATTGCATAAGGGTTGGGTTCATTTGGATTGGCCAACCAGACATCAGATTGCCTTGGGTTTAGCCCAAGGATTGGCTTATCTTCATCATGATTTGTTGCCTTCTATTATTCATAGGGACATTAAGACTACTAATATTCTGCTGGATGTCAATTATCACCCTAAGGTTGCTGATTTTGGGATTGCTAAGGTTTTGCAAGCTAGAGCCGGGAAGGATTCTACCACCACCGTCATCGCCGGGACTTATGGCTATCTCGCTCCCGAGTATGCATATTCATCAAAAGCGACGACAAAGTGCGACGTATACAGCTTTGGGATCGTGTTAATGGAGTTGATAACGGGGAAGAAGCCGGTGGAGGCGGAGTTCGGGGAGAACAAGAACATCATATATTGGGTATCAAACAAAGTAGACACAAAGGAAGGAGCAATGGAAGTATTGGACAAAAGAGTTTCAGGGTCATTCAAAGATGAGATGATTGAAGTTCTAAGGATTGCAATTAGGTGTACGTACAAGAATCCAGCCCTTCGACCCACCATGAAGGAAGTGGTTCAGTTGTTGATTGAAGCTGACCCTTGCAAATTCGATTCTCATAACAAATGCCCCAAACAAACCACTACCAAAATCAAGAACAACAACCCATTTGAACTATGA 2853 45.92 MALLFYFFFLFSLISLAIGNDDQSQFFSLIQKGVIGNSLPSDWSGNSVCNFTGVACNEKGLVVGIDLAGRVVSGRFPADVCSYLPDLRLLRLGRTGLRGTFPRGVTNCSVLEELDMSALSLTGTLPDFSPLKNLRVLDLSYNNFTGDFPLSVFSLTNLEKLNFNEDSNFNTWQLPESISGLTKLKSMVLTTCMLAGKIPATIGNMTGLVDLELSGNFLAGKIPKEIGNLKNLRELELYYNSLVGEIPEELGNLTELVDLDMSVNKLTGKLPESICRLPKLEVLQLYNNSLTGEIPISISNSTTLTMLSLYDNYMTGLVPSNLGQFSPMVVLDLSENYFSGPLPTDVCGEGKLMYFLVLENKFSGEIPPSYGNCLSLLRFRVSSNVLEGPVPAGLLGLPHVSIIDFGNNKLSGEIPNSFVKARNLSELFMQGNKISGTLPPEISKATNLVKIDLSNNLFTGPIPSEIGNLKRLNLLLLQGNHLNSSIPTSLSELKSLNVLDLSENKLTGNIPESLCQLLPNSINFSNNQLSGPIPLSLIKGGLVESFSGNPGLCVSVYLDSSDQKFPICPQNYNKKRLNSIWAIGVSAFIIFIGAALYLKRRLSREKSLTEHEETLSSSFFSYDVKSFHRISFDPREIIESMVDKNIVGQGGSGTVYKIELGSGEMVAVKRLWSRKGKDPTSDQEQLYMDKELKTEVETLGSIRHKNIVKLYCYFSSLDCSLLVYEYMPNGNLWDALHKGWVHLDWPTRHQIALGLAQGLAYLHHDLLPSIIHRDIKTTNILLDVNYHPKVADFGIAKVLQARAGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGIVLMELITGKKPVEAEFGENKNIIYWVSNKVDTKEGAMEVLDKRVSGSFKDEMIEVLRIAIRCTYKNPALRPTMKEVVQLLIEADPCKFDSHNKCPKQTTTKIKNNNPFEL 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 86694398 86698944 + Hsped.01g21980.1 Hepe01g2198 561308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2198 950 Gene3D Ribonuclease Inhibitor 170 291 IPR032675 -
Hepe01g2198 950 FunFam Leucine-rich repeat receptor-like protein kinase 171 273 - -
Hepe01g2198 950 SMART serkin_6 641 927 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2198 950 ProSitePatterns Protein kinases ATP-binding region signature. 647 669 IPR017441 GO:0005524(InterPro)
Hepe01g2198 950 FunFam receptor protein-tyrosine kinase CEPR1 624 726 - -
Hepe01g2198 950 Gene3D Phosphorylase Kinase; domain 1 624 726 - -
Hepe01g2198 950 Gene3D Transferase(Phosphotransferase) domain 1 727 943 - -
Hepe01g2198 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g2198 950 Pfam Leucine Rich Repeat 279 300 IPR001611 GO:0005515(InterPro)
Hepe01g2198 950 Pfam Leucine Rich Repeat 423 444 IPR001611 GO:0005515(InterPro)
Hepe01g2198 950 Pfam Leucine Rich Repeat 447 469 IPR001611 GO:0005515(InterPro)
Hepe01g2198 950 Pfam Leucine Rich Repeat 256 277 IPR001611 GO:0005515(InterPro)
Hepe01g2198 950 Pfam Leucine Rich Repeat 495 517 IPR001611 GO:0005515(InterPro)
Hepe01g2198 950 Pfam Leucine Rich Repeat 133 154 IPR001611 GO:0005515(InterPro)
Hepe01g2198 950 Pfam Leucine Rich Repeat 231 253 IPR001611 GO:0005515(InterPro)
Hepe01g2198 950 SUPERFAMILY Protein kinase-like (PK-like) 628 920 IPR011009 -
Hepe01g2198 950 Gene3D Ribonuclease Inhibitor 25 169 IPR032675 -
Hepe01g2198 950 ProSiteProfiles Protein kinase domain profile. 641 921 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2198 950 SUPERFAMILY L domain-like 246 558 - -
Hepe01g2198 950 Gene3D Ribonuclease Inhibitor 292 563 IPR032675 -
Hepe01g2198 950 FunFam leucine-rich repeat receptor-like protein kinase TDR 727 932 - -
Hepe01g2198 950 Pfam Protein kinase domain 644 918 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2198 950 PANTHER RECEPTOR-LIKE PROTEIN 55 267 919 - -
Hepe01g2198 950 SMART LRR_typ_2 277 301 IPR003591 -
Hepe01g2198 950 SMART LRR_typ_2 229 253 IPR003591 -
Hepe01g2198 950 SMART LRR_typ_2 131 155 IPR003591 -
Hepe01g2198 950 SMART LRR_typ_2 493 517 IPR003591 -
Hepe01g2198 950 SUPERFAMILY RNI-like 65 346 - -
Hepe01g2198 950 FunFam Receptor protein-tyrosine kinase CEPR1 277 562 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2198 Hepe-Chr1:86694398 Hepe10g0394 Hepe-Chr10:4328805 1.67e-143 dispersed
Hepe01g2197 Hepe-Chr1:86678875 Hepe01g2198 Hepe-Chr1:86694398 2.78e-103 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72498 PF00069 Pkinase 1.40E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2198 - - - 0.0