Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2243 ATGGGTAGCTCTAGAGATATAGCCATTGGTCCAGTTGCTGTTGTTTCTCTCTTGTTGGGGACGCTGCTTCAAGCGGAAATCGATTCCACTACGAATGCAGAAGATTATAGGCGACTGGCGTTTACAGCTACATTCTTTGCAGGGATCACACAAGCCACCCTTGGAGTTCTGAGGATGGGATTCCTAATTGACTTCTTGTCCCATGCTGCCATTGTTGGTTTCATGGGTGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATAAAGAATTTCACAAAGAAAGCAGATATTATCTCTGTTATGCAGTCCGTATTTGGCACAATGCGACACGGATGGAACTGGCAGACAATAGTCATTGCTGCAACCTTCCTTGGCTTTCTTCTATTTGCAAAATCCATTGGGAAGAAGAACAAGAGGCTCTTCTGGGTGCCTGCAATTGCTCCACTCATATCTGTTGTTCTGTCTACTCTTTTGGTTTTCATTACTCGTGCAGATAAGGAAGGGGTTGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCCCATCTGTGAAAGACTTGTATTTCTCAGGAAAATACCTTCTAAAAGGGCTTAAGATCGGTGTCGTGGCGGGTATGGTAGCATTGACGGAAGCCGTTGCGATTGGAAGAACGTTCGCTTCAATGAAAGACTATCAAATTGATGGGAACAAGGAAATGGTAGCAATGGGAGTCATGAATGTTGTTGGTTCGATGAGTTCCTGCTATGTAACAACAGGGTCATTCTCTCGATCCGCCGTAAATTACATGGCTGGCTGCCAAACTGCAGTCTCCAACATTGTGATGTCCATTGTAGTACTCCTAACTTTGGCATTCCTCACCCCACTTTTCAAATATACTCCAAACGCCATTCTGTCTGCTATCATTATATCCGCTGTGATCAACCTGATCGACTTACACGCAGCAAAGTTGATTTGGAAGATTGATAAATTTGATTTTGTTGCTTGTATGGGAGCCTTCCTCGGTGTCATCTTTATCTCTGTTGAGATAGGTTTACTAATTGCGGTATCCATTTCCTTCGCCAAAATCCTTCTACAAGTTACAAGACCAAGGACTGCAATTCTTGGAAATATCCCAAGGACAACTGTTTACCGAAACATACAGCAATATCCCGAAGCAACCAAAGTTCCCGGCATTCTGATTGTGAGAGTCGATTCGGCAATTTACTTTTCCAACTCTAATTACATCAAGGAAAGGATATTGAGATGGCTGGTTGATGAGGAAGAATTAACGAAAAAGTCATACCAGAACAAAATCCAATTTCTAATAGTTGAAATGTCACCTGTTACTGACATAGACACGAGTGGCATACATGCTTTGGAAGAGCTAAATAGGAGTCTCGAGAAAAGAGAAATTCAGCTCATTCTAGCAAATCCGGGACCCGTGGTGATCGACAAGCTTCACACATCGAAGTTAGCAGATTTGATAGGCCAAGACAATATCTTCCTCACAGTTGCAAATGCAGTCTCATCTTGTAATTCAAAGATAATGAGCGACGTTTGA 1557 42.77 MGSSRDIAIGPVAVVSLLLGTLLQAEIDSTTNAEDYRRLAFTATFFAGITQATLGVLRMGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKADIISVMQSVFGTMRHGWNWQTIVIAATFLGFLLFAKSIGKKNKRLFWVPAIAPLISVVLSTLLVFITRADKEGVAIVKHIEKGINPPSVKDLYFSGKYLLKGLKIGVVAGMVALTEAVAIGRTFASMKDYQIDGNKEMVAMGVMNVVGSMSSCYVTTGSFSRSAVNYMAGCQTAVSNIVMSIVVLLTLAFLTPLFKYTPNAILSAIIISAVINLIDLHAAKLIWKIDKFDFVACMGAFLGVIFISVEIGLLIAVSISFAKILLQVTRPRTAILGNIPRTTVYRNIQQYPEATKVPGILIVRVDSAIYFSNSNYIKERILRWLVDEEELTKKSYQNKIQFLIVEMSPVTDIDTSGIHALEELNRSLEKREIQLILANPGPVVIDKLHTSKLADLIGQDNIFLTVANAVSSCNSKIMSDV 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 87090554 87093801 + Hsped.01g22430.1 Hepe01g2243 561353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2243 518 Pfam Sulfate permease family 1 336 IPR011547 GO:0016020(InterPro)
Hepe01g2243 518 PANTHER SULFATE TRANSPORTER 1 511 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g2243 518 FunFam Sulfate transporter 31 367 513 - -
Hepe01g2243 518 Pfam STAS domain 388 506 IPR002645 -
Hepe01g2243 518 SUPERFAMILY SpoIIaa-like 389 511 IPR036513 -
Hepe01g2243 518 NCBIfam sulfate permease 1 506 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g2243 518 CDD STAS_SulP_like_sulfate_transporter 388 503 - -
Hepe01g2243 518 Gene3D STAS domain 367 514 IPR036513 -
Hepe01g2243 518 Coils Coil 423 443 - -
Hepe01g2243 518 ProSiteProfiles STAS domain profile. 387 510 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2243 Hepe-Chr1:87090554 Hepe02g0764 Hepe-Chr2:8401530 1.55e-246 dispersed
Hepe01g2243 Hepe-Chr1:87090554 Hepe02g2353 Hepe-Chr2:68163732 6.63e-296 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2243 K17470 - csv:101207370 910.983