Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2257 ATGAATGGGGAAGTTCAATTTTGCTTCACCTCCTACTTTAGTTGTCTTCTCCGGCATAGTTCCCTATATAAAGACGCTGCTTCTGCTTCTTCATTTATCTGCTCAGAAACCCATTTCTTGTTTGTGTATCACCGCTCAAATTGGAACTATAAAAGTGTTAGAGGGCCATTCACTCTCTCAATCCACCTTACCATGACTACTTCGGTCTCAAATCGCCGCTCTAATTCGCCCGTTCGTAGTTACAATTTCCCGTCTAATCAAGAAATTGCGATACGGAAGAATTCTGTACAAATGCACGACGACGAAGATTACTCCAGTGACGAAGACTGCGAGTCCGATTTCAGCGATTTGATTCATAAAGGGATGAGCGAATTGGAGCCCTCGATTCTGGACCCTAGGGATTTCGGAACGGCTGATAACTGGATCCAGCGAAACGAATCCATGGTCCGTCTTACAGGTAAACATCCCTTCAATTCTGAGCCTCCTTTAGCCCGTTTGATGCACCATGGGTTCATCACTCCGGTCCCGCTTCATTACGTCCGTAACCACGGTTCGGTGCCCATGGCCAAGTGGGAGGAATGGACTGTTGAGGTTTCCGGTCTAGTCAAAAGACCCACCCTGTTCACCATGGACCAACTTGTAAACGAATTCCCCAGCCGCGAGCTTCCAGTCACCCTCGTCTGCGCTGGAAACCGCCGCAAGGAGCAGAATATGGTGAAAAAAACCATCGGATTCAACTGGGGTGCCGCGGGGATCTCCACGTCCGTCTGGCGGGGAGTTTTACTGCGCGATGTTTTGAAGCGATGTGGCATATTCAGCAATAGTAAGGGAGCCCTCAATGTTTGTTTTGAAGGAGCAGAGTCCTTACCCGGAGGCGGTGGGTCCAAATACGGGACCAGCATCAGAAAGGAAATAGCCATGGACCCATCTAGAGATATAATGTTAGCATATATGCAAAACGGTCTCCTTCTAGAACCGGACCACGGCTTTCCGTTGCGCCTCATCACACCCGGATTCATCGGTGGACGGATGGTGAAATGGCTGAAACGCATCATAGTGACCACACAAGAATCAGATAGCTATTACCACTACCACGACAACAAAGTCCTCCCGTCCCATGTAGATGCAGAATTGGCAAACGCTGAAGCTTGGTGGTACAAGCCGGAGTATTTGATAACCGAGTTGAACTTAAACTCGGTGATAACGTCCCCATGTCACGAGGAAATATTACCGGTAAATTCATGGACTACACAGCGGCCATACACGTTGAGGGGATATGCATATACTGGAGGAGGAAAGAAAGTGACACGAGTGGAGGTGAGTCTGGATGACGGAAGGTCATGGCATGTGTGCAATCTGAACCACCCTGAGAAGGCAACCAAATACGGCAAATATTGGTGTTGGTGTTTTTGGTCACTCGACGTTGAACTGCTTAACATCCTTGCGGCTAACGGATTTGCCGTCCGCGCTTGGGATGACACCTTCAACACTCAACCCGACAAGCTCATATGGAATCTCATGGGAATGATGAACAATTGTTGGTTTCGGGTGAAAGCCAACATGTGCAAACCTCAGAAGGGAGAGATCGGAATCGTCTTCGAACACCCAACTTTGCCCGGCAACCAACCCAGCGGATGGATGGCCAAAGAGAGGCATCTCGAAATGTCAACCGAAACCAATCAAAGCATGAAGAAGAGTCTCTCGTCGCCGTTCATCAACACCACCTCAAAGATATACTCTATGTCCGATGTCAAAACACACAACTCACCCCAGTCCGCATGGATCGTGGTCCACAGCCATGTTTACGACTGCACCCGCTTCCTCAAGGACCATCCCGGTGGTACCGATAGCATTCTCCTGAACACCGGCACCGACTGCACCGAGGAATTCGACGCCATCCACTCGGACAAAGCCAAGAAAATGCTGGAGGAATATCGAATCGGCGAGTTGATGAGCACCGGTTACGCCTCGGATGCCTCCTCCTCCTCCTCCTCCTCCTCATCGCCTAACAACTCAATCCATGGGCTCTCCCAGTTACCTCCAATCACAGAGACGATTTCAGCAGCTAGGCGTGTAGCTCTAGTGGCGTGGGAAAAACTCCCCTGCAAATTAGTATCGAAAACGTCAATTTCACATGACGTTAGACAGTTTAGATTTGCATTGCCTTTAGAGGATCAAGTCCTTGGATTACCGGTGGGGAAGCATATATTCCTAAGCGCTAGGATAGACGGGAAGCTTTGTATGAGGGCGTACACGCCAACAAGCGGCATCGATGAAGTGGGCTATTTCGATCTAGTGGTCAAAATCTACTTCAAAAACACCAACCCAAAATTCCCCGAGGGGGGGCTCATGTCCCAGCATTTGGAGTCGCTCCCATTAGGATCTAACCTAGAAGTGAAAGGTCCATTGGGTCACATCGAATACACCGGGCGTGGTAACTTTGTGGTCGAAGGCAAGCCAAAGAAGGCTAAGAAGTTGGCGATGTTAGCCGGCGGAACGGGGATAACGCCGATATATCAAGTGGCGCAGGCGATTTTGAATGATCCCGAGGACGAAACCGAGATGTTTTTGGTGTATGCTAACAGAACTGAAAATGATATTTTGCTGAAGGAAGAGTTGGATGAATGGGCTAAGAGTGATGAGAGGTTTAAAGTGTGGTATGTTGTGGAAGAGAGTGTGAGGGAGGGCTGGGAATTCAGTGTGGGTGTGCTCACGGAGTGTATCATGAGGGAGCATCTTCCCGAAGCTTCGCCGGACACGTTTGCGTTGGCTTGTGGACCGCCGCCGATGGTTAAGTTTGCTGTGCAACCCAACTTGGAGAAGATGAACTACGACATTGCTAACTCGTTGTTGGTGTTTTAG 2862 49.34 MNGEVQFCFTSYFSCLLRHSSLYKDAASASSFICSETHFLFVYHRSNWNYKSVRGPFTLSIHLTMTTSVSNRRSNSPVRSYNFPSNQEIAIRKNSVQMHDDEDYSSDEDCESDFSDLIHKGMSELEPSILDPRDFGTADNWIQRNESMVRLTGKHPFNSEPPLARLMHHGFITPVPLHYVRNHGSVPMAKWEEWTVEVSGLVKRPTLFTMDQLVNEFPSRELPVTLVCAGNRRKEQNMVKKTIGFNWGAAGISTSVWRGVLLRDVLKRCGIFSNSKGALNVCFEGAESLPGGGGSKYGTSIRKEIAMDPSRDIMLAYMQNGLLLEPDHGFPLRLITPGFIGGRMVKWLKRIIVTTQESDSYYHYHDNKVLPSHVDAELANAEAWWYKPEYLITELNLNSVITSPCHEEILPVNSWTTQRPYTLRGYAYTGGGKKVTRVEVSLDDGRSWHVCNLNHPEKATKYGKYWCWCFWSLDVELLNILAANGFAVRAWDDTFNTQPDKLIWNLMGMMNNCWFRVKANMCKPQKGEIGIVFEHPTLPGNQPSGWMAKERHLEMSTETNQSMKKSLSSPFINTTSKIYSMSDVKTHNSPQSAWIVVHSHVYDCTRFLKDHPGGTDSILLNTGTDCTEEFDAIHSDKAKKMLEEYRIGELMSTGYASDASSSSSSSSSPNNSIHGLSQLPPITETISAARRVALVAWEKLPCKLVSKTSISHDVRQFRFALPLEDQVLGLPVGKHIFLSARIDGKLCMRAYTPTSGIDEVGYFDLVVKIYFKNTNPKFPEGGLMSQHLESLPLGSNLEVKGPLGHIEYTGRGNFVVEGKPKKAKKLAMLAGGTGITPIYQVAQAILNDPEDETEMFLVYANRTENDILLKEELDEWAKSDERFKVWYVVEESVREGWEFSVGVLTECIMREHLPEASPDTFALACGPPPMVKFAVQPNLEKMNYDIANSLLVF 953
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 87210185 87213867 + Hsped.01g22570.1 Hepe01g2257 561367

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2257 953 Gene3D - 804 953 IPR039261 -
Hepe01g2257 953 PANTHER SULFITE REDUCTASE 94 524 - GO:0006790(PANTHER)|GO:0008482(PANTHER)|GO:0020037(PANTHER)|GO:0043546(PANTHER)
Hepe01g2257 953 Gene3D - 572 652 IPR036400 -
Hepe01g2257 953 FunFam Nitrate reductase 394 570 - -
Hepe01g2257 953 PIRSF Nitr_rd_NADH 61 952 IPR012137 GO:0006809(InterPro)|GO:0042128(InterPro)|GO:0050464(InterPro)
Hepe01g2257 953 Pfam Cytochrome b5-like Heme/Steroid binding domain 581 651 IPR001199 -
Hepe01g2257 953 SUPERFAMILY Riboflavin synthase domain-like 692 809 IPR017938 -
Hepe01g2257 953 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 697 809 IPR017927 GO:0016491(InterPro)
Hepe01g2257 953 Pfam Oxidoreductase FAD-binding domain 702 808 IPR008333 -
Hepe01g2257 953 FunFam Sulfite oxidase, mitochondrial 574 654 - -
Hepe01g2257 953 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 576 651 IPR001199 -
Hepe01g2257 953 SMART Cyt_b5_2 579 651 IPR001199 -
Hepe01g2257 953 PRINTS Cytochrome B5 signature 601 611 IPR001199 -
Hepe01g2257 953 PRINTS Cytochrome B5 signature 611 625 IPR001199 -
Hepe01g2257 953 PRINTS Cytochrome B5 signature 626 633 IPR001199 -
Hepe01g2257 953 PRINTS Cytochrome B5 signature 638 650 IPR001199 -
Hepe01g2257 953 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 131 392 IPR036374 -
Hepe01g2257 953 PRINTS Cytochrome B5 reductase signature 921 929 - -
Hepe01g2257 953 PRINTS Cytochrome B5 reductase signature 794 808 - -
Hepe01g2257 953 PRINTS Cytochrome B5 reductase signature 865 876 - -
Hepe01g2257 953 PRINTS Cytochrome B5 reductase signature 749 756 - -
Hepe01g2257 953 PRINTS Cytochrome B5 reductase signature 827 846 - -
Hepe01g2257 953 PRINTS Cytochrome B5 reductase signature 728 739 - -
Hepe01g2257 953 FunFam Nitrate reductase [NADH] 804 953 - -
Hepe01g2257 953 Pfam Oxidoreductase NAD-binding domain 828 935 IPR001433 GO:0016491(InterPro)
Hepe01g2257 953 SUPERFAMILY E set domains 394 520 IPR014756 -
Hepe01g2257 953 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 749 756 IPR001709 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 827 846 IPR001709 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 865 876 IPR001709 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 921 929 IPR001709 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 853 862 IPR001709 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 610 620 IPR001709 GO:0016491(InterPro)
Hepe01g2257 953 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 607 614 IPR018506 GO:0020037(InterPro)
Hepe01g2257 953 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 200 235 IPR022407 GO:0043546(InterPro)
Hepe01g2257 953 FunFam NADH-cytochrome b5 reductase 688 803 - -
Hepe01g2257 953 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 574 654 IPR036400 -
Hepe01g2257 953 Gene3D Translation factors 691 803 - -
Hepe01g2257 953 FunFam Nitrate reductase 135 384 - -
Hepe01g2257 953 Gene3D - 133 384 IPR036374 -
Hepe01g2257 953 CDD eukary_NR_Moco 134 518 - -
Hepe01g2257 953 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 797 946 IPR039261 -
Hepe01g2257 953 Gene3D - 394 570 - -
Hepe01g2257 953 Pfam Mo-co oxidoreductase dimerisation domain 390 520 IPR005066 GO:0016491(InterPro)|GO:0030151(InterPro)
Hepe01g2257 953 Pfam Oxidoreductase molybdopterin binding domain 183 362 IPR000572 -
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 235 247 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 250 265 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 171 187 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 325 338 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 437 449 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 464 474 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 392 404 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 308 324 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 423 437 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 149 163 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 341 354 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 224 235 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 502 515 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 PRINTS Eukaryotic molybdopterin domain signature 489 501 IPR008335 GO:0016491(InterPro)
Hepe01g2257 953 CDD cyt_b5_reduct_like 702 948 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2257 K10534 - - csv:101216001 1456.43
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2257 Hepe-Chr1:87210185 Hepe02g2328 Hepe-Chr2:67528315 0.0 dispersed
Hepe02g3397 Hepe-Chr2:83444552 Hepe01g2257 Hepe-Chr1:87210185 6.82e-55 transposed
Hepe01g2257 Hepe-Chr1:87210185 Hepe02g2327 Hepe-Chr2:67451581 0.0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g325 . . . . . . . . Cmo04g02441 Cmo15g00727 . Cma09g00664 . . . Cpe06g00519 . . . . . . . . . . . . . . . . . . Cone20ag0466 Lsi04g02366 Csa04g01830 . . Blo17g00195 Blo18g00197 . Bda13g01500 Bpe02g01621 Bpe14g00366 Bma01g00839 Bma02g00239 Sed04g0506 . Cmo09g00648 . . Car04g02252 Car09g00590 Cpe01g02024 . Bhi09g02640 Tan01g3984 Cmetu09g0993 . Hepe01g2257 Mch11g0805 . Cla11g01515 Cam11g1575 Cec11g1604 Cco11g1602 Clacu11g1730 Cmu11g1548 Cre11g1965 . . Chy07g00682 Cme07g00892
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000829 1 3 2 3 2 2 4 3 3 3 3 3 4 2 3 6 3 1 4 3 5 4 3 3 3 4 3 3 3 1 90