Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g2258 | ATGGGAACAATCCTTCTATATTTCTTCTTTTTCTACGCCCTTTACTTCTTGATTCATCATCTTCTCACCAAGATCCAGAACCGCCCACCGTCCCCCTTCCCAACCCTCCCCTTACTCGGCCATCTCCACCTCCTCAAGCCCCCACTCCACCGGACCTTAGCCAAAATTTCCGACAAATACGGCCCTATTCTCCTTCTCCGGTTCGGATCTCGTCCAGTCCTCCTCATCTCTTCCCCTTCCGCCGCCGAAGAATGCTTCTCAAAAAACGACATCGTTTTCGCCAACCGCCCCCGCCTCCTCGCCGGCAAGCATTTAGGCTACGACTTCACCGCCGTCGTTTGGGCTCCTTATGGAGATCACTGGCGCAATCTCCGCCGAATCTCATCCCTTCATCTCCTCTCCTCCGCTAACATCCAAGCTCTCTCCTCCGTACGCGCAGACGAGGTCCAATCCCTAATCCGAAGACTCTGTAACAACTCAAACCAGATCGTTGATGTTAGAACCGCTCTGTTCGAGTTCATGCTTAATGTAATGGTGAGGATGATCGGCGGAAAGCGTTACTTCGGCGAGAACGCGGCCGATGCAGAGGAATCTCGGAATTTCCAGGAGATCGTTACCGAAACGTTTAAATTGGCAGGGGCTAATTTCGTCGATTATCTTCCGATACTGAAATGGATCAGAATTAACGGGAAAACTGAGAAGAGATACATTAATCTGCGGAAAAGAAGGGATAATTGGATTCAGAATCTGATAGAAGAGCACAGAATTAGGAAGGAATCTCCATCGAAGAAGACGATGATCGAAGTAATGTTATCTCTTCAAGAATCGGATCCCGATTACTACACCGACGAAATCATCAAAGGCCTCATGATGGTTTTGTTATCGGCTGGGACCGACACGTCGGTTGGGACGATGGAATGGGCCATGTCGTTATTGCTAAACCATCCCAAAGTACTGGCAAAAGCACGATCCGAAATCGACGATCTAATCGGCGAAAACGAAAAACGACATGTCGAGGAATCAGATTTAGAAAGGCTACCGTATCTGCAGAGTGTGATCAAGGAGACGCTGAGGATGTACCCGGTGGGGCCGTTATTGGTACCCCACGAATCGTCCGCGGATTGTAGGGTAGGTGGGTACCACGTGCCGCGTGGCACGATGTTACTAGTGAACGCGTGGGCCATTCAAAACGATGCCAGAATTTGGGAGGATGCGGCTGCGTTCAAGCCGGAGAGATTCTTAGAGGCGGCCGTGGAAGGCGGAGATGGGTTGAGATATATGCCGTTTGGGACGGGTAGGAGGGGGTGCCCTGGGGAAGGGCTAGCCTTGAAAGTGGTGGGCTTGGTTTTGGGCTCGTTAATTCAGTGCTTTGAGTGGGAGAGAATTGGGGAAGAAATGGTAGACATGGCCGAAGGAGCAGGGCTGACTATGCCCAAGGCCAGCCCTTTGCAAGCCAAGTGTAGGCCGCGCCCAATTCTCCACTGTACCATGTAA | 1494 | 51.2 | MGTILLYFFFFYALYFLIHHLLTKIQNRPPSPFPTLPLLGHLHLLKPPLHRTLAKISDKYGPILLLRFGSRPVLLISSPSAAEECFSKNDIVFANRPRLLAGKHLGYDFTAVVWAPYGDHWRNLRRISSLHLLSSANIQALSSVRADEVQSLIRRLCNNSNQIVDVRTALFEFMLNVMVRMIGGKRYFGENAADAEESRNFQEIVTETFKLAGANFVDYLPILKWIRINGKTEKRYINLRKRRDNWIQNLIEEHRIRKESPSKKTMIEVMLSLQESDPDYYTDEIIKGLMMVLLSAGTDTSVGTMEWAMSLLLNHPKVLAKARSEIDDLIGENEKRHVEESDLERLPYLQSVIKETLRMYPVGPLLVPHESSADCRVGGYHVPRGTMLLVNAWAIQNDARIWEDAAAFKPERFLEAAVEGGDGLRYMPFGTGRRGCPGEGLALKVVGLVLGSLIQCFEWERIGEEMVDMAEGAGLTMPKASPLQAKCRPRPILHCTM | 497 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 87222851 | 87224412 | + | Hsped.01g22580.1 | Hepe01g2258 | 561368 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g2258 | 497 | SUPERFAMILY | Cytochrome P450 | 29 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 429 | 438 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe01g2258 | 497 | FunFam | Cytochrome P450 family protein | 21 | 493 | - | - | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 173 | 191 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 350 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 391 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 81 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 57 | 76 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PANTHER | CYTOCHROME P450 82C3-RELATED | 7 | 490 | IPR050651 | - | |
| Hepe01g2258 | 497 | CDD | CYP81 | 61 | 483 | - | - | |
| Hepe01g2258 | 497 | Gene3D | Cytochrome P450 | 23 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | PRINTS | P450 superfamily signature | 351 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe01g2258 | 497 | Pfam | Cytochrome P450 | 30 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g1809 | Hepe-Chr1:83093226 | Hepe01g2258 | Hepe-Chr1:87222851 | 7.75e-207 | dispersed | |
| Hepe01g1810 | Hepe-Chr1:83097673 | Hepe01g2258 | Hepe-Chr1:87222851 | 3.20e-194 | dispersed | |
| Hepe01g2258 | Hepe-Chr1:87222851 | Hepe04g1276 | Hepe-Chr4:68311447 | 1.27e-168 | dispersed | |
| Hepe01g2258 | Hepe-Chr1:87222851 | Hepe08g1316 | Hepe-Chr8:14983391 | 2.52e-199 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g2258 | - | - | - | 0.0 |