Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2295 ATGCAGATAGCTATGTTAAAAAGTTCGTGTAAATTGGCACTTAAAGACCTCAGGCGTTGGATGACCCCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCGGCTGCAATTGTACCAGAACCTTTCGGTGTTGTCCTGATCATTTCTGCTTGGAATTATCCATTCTTGTTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAGCAACATCATCTTTAATGGCAAAACTTCTAGGGAAATATTTGGATACTTCTGCTGTAAAAGTTGTTGAGGGTGCTGTTTCCGAAACTAGTGCTTTGTTGGAGCAAAAGTGGGACAAGATATTTTACACAGGCAATGGAAGAGTGGGGCGAATAGTGATGGCAGCTGCTGCCAAGCACCTTACACCAGTTGTTCTAGAGCTTGGAGGAAAGTCTCCAGTAGTAGTTGATTCAGAAATCAATTTGCAGGTTGCGAGTAAGCGAATTGTTGTTGGTAAGTGGGGCTGTAACAATGGACAAGCGTGCATTGCTCCTGATTATATCATAACTACAAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTGAAAAAAGAACTGGAGAGATTTTACGGAAAGAATCCGTTGGAATCGAAAGATATATCTCGCGTTGTGAATGGCAACCACTTTGATCGCTTGACAAAGCTCTTAGATGATGACAAAGTTTCTGGCAAGATTGTGCATGGAGGTGAAAAGGACAAAACCAAATTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCCCTGATTATGACGGAGGAGATCTTTGGTCCCTTACTTCCCATTATCACGGTAGACAAAGTGGAGGATAGCTTCGACGTAGTGAACTCGGGCACAAAGCCGCTTGCAGCATATTTATTTACCAACAACAAAAGGCTCAAGGAACGGTTCGTGGCTCGTATCTCTGCAGGGGGTGTGGTTATCAATGACATCGCCTTACATCTGACAGTTAGCACACTACCATTTGGAGGAATTGGGGATAGTGGAATGGGAGCTTACCATGGGAAGTTCTCATTTGATGCATTCAGCCATAAGAAGGCTGTTCTTTATCGAAGCTTCGCAGGCGATGCGGCGATGAGATACCCGCCATACACGAAGGGAAAGCTGAGAATTCTCAAGGCTCTTCTTGGAGGTGGCATAATGGGAATCATTCGTGCTCTTCTTGGATGGTCGTAA 1248 43.99 MQIAMLKSSCKLALKDLRRWMTPEKVKTSITTFPSSAAIVPEPFGVVLIISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEISPATSSLMAKLLGKYLDTSAVKVVEGAVSETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASKRIVVGKWGCNNGQACIAPDYIITTKEFAPKLVESLKKELERFYGKNPLESKDISRVVNGNHFDRLTKLLDDDKVSGKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPIITVDKVEDSFDVVNSGTKPLAAYLFTNNKRLKERFVARISAGGVVINDIALHLTVSTLPFGGIGDSGMGAYHGKFSFDAFSHKKAVLYRSFAGDAAMRYPPYTKGKLRILKALLGGGIMGIIRALLGWS 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 87556561 87563137 + Hsped.01g22950.1 Hepe01g2295 561405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2295 415 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 370 IPR016162 GO:0016491(InterPro)
Hepe01g2295 415 PANTHER ALDEHYDE DEHYDROGENASE 2 414 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Hepe01g2295 415 Pfam Aldehyde dehydrogenase family 34 372 IPR015590 GO:0016491(InterPro)
Hepe01g2295 415 SUPERFAMILY ALDH-like 5 387 IPR016161 GO:0016491(InterPro)
Hepe01g2295 415 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 148 155 IPR029510 GO:0016491(InterPro)
Hepe01g2295 415 FunFam Aldehyde dehydrogenase 1 155 - -
Hepe01g2295 415 PIRSF ALDH 1 406 IPR012394 GO:0006081(InterPro)
Hepe01g2295 415 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 152 352 IPR016163 GO:0016620(InterPro)
Hepe01g2295 415 FunFam Aldehyde dehydrogenase 152 352 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2295 Hepe-Chr1:87556561 Hepe07g0686 Hepe-Chr7:8067223 3.74e-146 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2295 K00128 - csv:101219329 750.74