Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g2309 | ATGGCTATGGACGATACCGAGAGCTGTAGTAGTAGAGCGGTAGACGATTTTTCGTTTCAGACTTGGAGACAGAAGCAGAAGGTTGGTGTTTACGACGAAGTACTTCGTCGACTCAGGCTGTCGCACGAGGCGGAGACCAGCGTTCCTGGTTTTGAGGATGAACTTTGGGCTCATTTTCATCGCCTTCCTACTAGGTATGCTATGGACGTTAACGTAGAGAGGGCTGAAGATGTTCTCGTGCACAAAAATCTTCTCTATATGGCACATGATCCTGCTACTCGACCTGCGATTGATGTCCGTCTCGTACAGGTTCATTCATCTCCTGGTGCAAACTCTGGCAAGCCTGTTCATTCAAACTTGAAGGAAAAAGTGGACCAGCGGTTTTCTGATTATGACAGCAATCAGAGACACCACCCACCACCAGCATTTGGTTCATCAACGGAGGTCGAATATGGTTATGAGACCAGCCAATTACATGATATAGATCAGCCTGCCACTTTCTCCTGGCCAATGCATGAAATTACAATATCAACAATTGACAAGCCAAAATTACTCAGTCAGTTGACGTCCTTACTTTCTGAGATTGGGCTGAATATTCAAGAAGCGCATGCTTTTTCAACAACAGATGGCTTTTCCTTGGATGTTTTTGTAGTTGATGGTTGGGCAATTGAGGATACCAAGCAGCTAAAGGATATACTGGCTGAAGAAATATCAAAGATTCAGAAAAGGCATCCTCTTTTTACACCTTGGAGCATTTCCCCTACTGGGAAGAAAGACAAAATTGGAGTCAAGTTCATCACAACTTATGTCAACATTCCAAGGGACGAAGTTGATGTATGGGAAATTGATGCGAGCCTGTTAATCTATGAGAAGAAAATTGCGTCTGGATCTTTTAGTGACTTGTATAAAGGCACTTTCTATGGTCAAGATGTGGCTATTAAGCTTCTAAAAGATGAAAACTTGAATGAGACTGTACGGCGGGAATTTGCTCAAGAAATTCATATCATGAGAAAAATTCGGCATAAGAATGTTGTCCAATTTATTGGTGCATCTACCAGACCTCCAAGCTTTTTCATTGTTACAGAATACATGTCTGGTGGAAGCATGCACGACTTCTTACATCAACAAAAGAGAGTTCTTAGTTTTCCTTCCTTACTAAGAGTGGCAATTGACGTGTCCAAGGGAATGAACTATTTGCATCAAAAGAATATCATCCATAGAGATCTGAAAGCTGCAAATCTTTTGGTGGACGAAGATGGGGTTGTCAAGGTAGCTGATTTTGGTGTTGCCAGAGTGCAAGCTCAATCTGGTGTGATGACTGCAGAAACTGGAACATATCGTTGGATGGCTCCAGAGGTTATTGAGCACAAACCATATGATCATAAAGCTGATGTTTACAGCTTTGGGATAGTGTTGTGGGAGCTGCTTACAGGACAGCTTCCTTATGATAACCTAACTCCGTTACAAGCAGCAATAGGCGTGGTCCAGAAGGGTCTTCGGCCTAAGATCCCGAGGCATGCTCATCCAATGATGGTGAATTTGCTCGAGAAATGCTGGCGGCAGGATCCATCTTTGAGACCCGAATTTTCTGAAATTACCAAACTTCTACAGCAGATGGTCATCAAGGAGGAGCCATCGGGAAGATGA | 1647 | 43.29 | MAMDDTESCSSRAVDDFSFQTWRQKQKVGVYDEVLRRLRLSHEAETSVPGFEDELWAHFHRLPTRYAMDVNVERAEDVLVHKNLLYMAHDPATRPAIDVRLVQVHSSPGANSGKPVHSNLKEKVDQRFSDYDSNQRHHPPPAFGSSTEVEYGYETSQLHDIDQPATFSWPMHEITISTIDKPKLLSQLTSLLSEIGLNIQEAHAFSTTDGFSLDVFVVDGWAIEDTKQLKDILAEEISKIQKRHPLFTPWSISPTGKKDKIGVKFITTYVNIPRDEVDVWEIDASLLIYEKKIASGSFSDLYKGTFYGQDVAIKLLKDENLNETVRREFAQEIHIMRKIRHKNVVQFIGASTRPPSFFIVTEYMSGGSMHDFLHQQKRVLSFPSLLRVAIDVSKGMNYLHQKNIIHRDLKAANLLVDEDGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVYSFGIVLWELLTGQLPYDNLTPLQAAIGVVQKGLRPKIPRHAHPMMVNLLEKCWRQDPSLRPEFSEITKLLQQMVIKEEPSGR | 548 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 87687402 | 87693643 | + | Hsped.01g23090.1 | Hepe01g2309 | 561419 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g2309 | 548 | Coils | Coil | 223 | 243 | - | - | |
Hepe01g2309 | 548 | ProSiteProfiles | ACT domain profile. | 173 | 250 | IPR002912 | - | |
Hepe01g2309 | 548 | SUPERFAMILY | ACT-like | 171 | 238 | IPR045865 | - | |
Hepe01g2309 | 548 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 138 | 539 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Hepe01g2309 | 548 | Gene3D | Phosphorylase Kinase; domain 1 | 280 | 365 | - | - | |
Hepe01g2309 | 548 | CDD | STKc_MAP3K-like | 293 | 536 | - | - | |
Hepe01g2309 | 548 | PRINTS | Tyrosine kinase catalytic domain signature | 398 | 416 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe01g2309 | 548 | PRINTS | Tyrosine kinase catalytic domain signature | 507 | 529 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe01g2309 | 548 | PRINTS | Tyrosine kinase catalytic domain signature | 463 | 485 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe01g2309 | 548 | PRINTS | Tyrosine kinase catalytic domain signature | 361 | 374 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe01g2309 | 548 | PRINTS | Tyrosine kinase catalytic domain signature | 444 | 454 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe01g2309 | 548 | FunFam | Serine/threonine-protein kinase isoform 1 | 276 | 365 | - | - | |
Hepe01g2309 | 548 | ProSiteProfiles | Protein kinase domain profile. | 287 | 540 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe01g2309 | 548 | SUPERFAMILY | Protein kinase-like (PK-like) | 266 | 535 | IPR011009 | - | |
Hepe01g2309 | 548 | SMART | serkin_6 | 287 | 540 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe01g2309 | 548 | Gene3D | - | 171 | 244 | - | - | |
Hepe01g2309 | 548 | Gene3D | Transferase(Phosphotransferase) domain 1 | 366 | 546 | - | - | |
Hepe01g2309 | 548 | Pfam | Protein tyrosine and serine/threonine kinase | 289 | 535 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe01g2309 | 548 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 404 | 416 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1912 | Hepe-Chr1:83912803 | Hepe01g2309 | Hepe-Chr1:87687402 | 2.01e-50 | dispersed | |
Hepe01g2309 | Hepe-Chr1:87687402 | Hepe06g0891 | Hepe-Chr6:56192594 | 1.37e-221 | dispersed | |
Hepe05g1592 | Hepe-Chr5:65543665 | Hepe01g2309 | Hepe-Chr1:87687402 | 2.45e-20 | transposed | |
Hepe06g1491 | Hepe-Chr6:65487371 | Hepe01g2309 | Hepe-Chr1:87687402 | 3.64e-22 | transposed | |
Hepe01g2309 | Hepe-Chr1:87687402 | Hepe02g0398 | Hepe-Chr2:3817020 | 9.00e-240 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72503 | PF07714 | PK_Tyr_Ser-Thr | 3.60E-74 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g2309 | - | - | - | 0.0 |