Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2343 ATGAGTTGCTTTTCTTGCATTCGTACTCGTTGTAAAGACGCCAGCAAGGTCGAAATTGACAATGGGAGTGGGAGGGGGAAATCGTATTCGACTGAAACTGGAAAGGGGAAGGAATTACAAACCAGAAGTGGAAACAACCGGAAATGTGGGGCTGCACGAAGCTTCCCGTTTCGCGAACTGGCAACAGCGACAAGAGGTTTCAATGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAATCAGGCCAGGTTGTTGCGATTAAACAACTCAATCACGACGGTCTTCAAGGATTTCAGGAATTCATTGTTGAAGTTCTCATGTTAAGCTTATTGCATCATTGTAATCTTGTCACATTGATCGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTACGAGTATATGTCGATGGGAAGCTTGGAAGACCATCTTTTTGGTTTGTCCCCCGAGCGACCGACATTGAGTTGGAACACTCGAATCAAGATTGCTCTTGGTGCAGCCCAGGGCCTTGAATATCTTCACTGCACAGCCAATCCACCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTGGATGATGACTTCAATCCAAAGCTCTCGGATTTCGGACTGGCAAAGTTAGGACCGGTCGGTGACAACACTCATGTTTCCACTAGAGTGATGGGAACATATGGTTATTGTGCTCCGGAATATGCCATGAGCGGGAAACTGACACTTAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCTATTGATTCCACCAAGAAACCTGGAGAGCAAAATCTGGTTGCTTGGTCTCGCCCTTTTCTAAAAGACCGGAGGAAATTCATTCAATTAGTCGACCCACTCATGGAAGGACGCTACCCTCTTCGTTGTCTACACCATGCAATTGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACATTCCGGCCAATTATCAGTGATATCGTCGTGGCTCTTGAGTACTTAGTTTCTCAGAGTTTCGCATCAGAACAACAGTGGGACGGGGTGCCTAGTCCCTCCAAACTATCTCCTCAGAAGGACAGGAGTACCAATGTGCAAGAATCAAGGTATGGAAAGAGTTCAACCTTCAAGTAA 1158 45.16 MSCFSCIRTRCKDASKVEIDNGSGRGKSYSTETGKGKELQTRSGNNRKCGAARSFPFRELATATRGFNEVNLIGEGGFGRVYKGRLESGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLEDHLFGLSPERPTLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFIQLVDPLMEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLVSQSFASEQQWDGVPSPSKLSPQKDRSTNVQESRYGKSSTFK 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 87975029 87977074 - Hsped.01g23430.1 Hepe01g2343 561453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2343 385 MobiDBLite consensus disorder prediction 22 46 - -
Hepe01g2343 385 FunFam Serine/threonine-protein kinase PBS1 143 356 - -
Hepe01g2343 385 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
Hepe01g2343 385 CDD STKc_IRAK 73 341 - -
Hepe01g2343 385 MobiDBLite consensus disorder prediction 24 46 - -
Hepe01g2343 385 PANTHER OS07G0668900 PROTEIN 36 364 - -
Hepe01g2343 385 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2343 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g2343 385 Gene3D Phosphorylase Kinase; domain 1 37 142 - -
Hepe01g2343 385 ProSiteProfiles Protein kinase domain profile. 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2343 385 MobiDBLite consensus disorder prediction 350 385 - -
Hepe01g2343 385 Gene3D Transferase(Phosphotransferase) domain 1 143 357 - -
Hepe01g2343 385 SMART serkin_6 67 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g2343 385 FunFam probable serine/threonine-protein kinase RLCKVII 38 142 - -
Hepe01g2343 385 ProSitePatterns Protein kinases ATP-binding region signature. 73 95 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2343 Hepe-Chr1:87975029 Hepe08g1508 Hepe-Chr8:18894900 2.91e-196 dispersed
Hepe07g1580 Hepe-Chr7:54699284 Hepe01g2343 Hepe-Chr1:87975029 2.20e-82 dispersed
Hepe01g2343 Hepe-Chr1:87975029 Hepe02g0369 Hepe-Chr2:3465567 3.06e-94 wgd
Hepe01g2343 Hepe-Chr1:87975029 Hepe08g1507 Hepe-Chr8:18875861 3.68e-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72505 PF00069 Pkinase 1.00E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2343 - - - 0.0