Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g2343 | ATGAGTTGCTTTTCTTGCATTCGTACTCGTTGTAAAGACGCCAGCAAGGTCGAAATTGACAATGGGAGTGGGAGGGGGAAATCGTATTCGACTGAAACTGGAAAGGGGAAGGAATTACAAACCAGAAGTGGAAACAACCGGAAATGTGGGGCTGCACGAAGCTTCCCGTTTCGCGAACTGGCAACAGCGACAAGAGGTTTCAATGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAATCAGGCCAGGTTGTTGCGATTAAACAACTCAATCACGACGGTCTTCAAGGATTTCAGGAATTCATTGTTGAAGTTCTCATGTTAAGCTTATTGCATCATTGTAATCTTGTCACATTGATCGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTACGAGTATATGTCGATGGGAAGCTTGGAAGACCATCTTTTTGGTTTGTCCCCCGAGCGACCGACATTGAGTTGGAACACTCGAATCAAGATTGCTCTTGGTGCAGCCCAGGGCCTTGAATATCTTCACTGCACAGCCAATCCACCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTGGATGATGACTTCAATCCAAAGCTCTCGGATTTCGGACTGGCAAAGTTAGGACCGGTCGGTGACAACACTCATGTTTCCACTAGAGTGATGGGAACATATGGTTATTGTGCTCCGGAATATGCCATGAGCGGGAAACTGACACTTAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCTATTGATTCCACCAAGAAACCTGGAGAGCAAAATCTGGTTGCTTGGTCTCGCCCTTTTCTAAAAGACCGGAGGAAATTCATTCAATTAGTCGACCCACTCATGGAAGGACGCTACCCTCTTCGTTGTCTACACCATGCAATTGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACATTCCGGCCAATTATCAGTGATATCGTCGTGGCTCTTGAGTACTTAGTTTCTCAGAGTTTCGCATCAGAACAACAGTGGGACGGGGTGCCTAGTCCCTCCAAACTATCTCCTCAGAAGGACAGGAGTACCAATGTGCAAGAATCAAGGTATGGAAAGAGTTCAACCTTCAAGTAA | 1158 | 45.16 | MSCFSCIRTRCKDASKVEIDNGSGRGKSYSTETGKGKELQTRSGNNRKCGAARSFPFRELATATRGFNEVNLIGEGGFGRVYKGRLESGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLEDHLFGLSPERPTLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFIQLVDPLMEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLVSQSFASEQQWDGVPSPSKLSPQKDRSTNVQESRYGKSSTFK | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 87975029 | 87977074 | - | Hsped.01g23430.1 | Hepe01g2343 | 561453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g2343 | 385 | MobiDBLite | consensus disorder prediction | 22 | 46 | - | - | |
Hepe01g2343 | 385 | FunFam | Serine/threonine-protein kinase PBS1 | 143 | 356 | - | - | |
Hepe01g2343 | 385 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 341 | IPR011009 | - | |
Hepe01g2343 | 385 | CDD | STKc_IRAK | 73 | 341 | - | - | |
Hepe01g2343 | 385 | MobiDBLite | consensus disorder prediction | 24 | 46 | - | - | |
Hepe01g2343 | 385 | PANTHER | OS07G0668900 PROTEIN | 36 | 364 | - | - | |
Hepe01g2343 | 385 | Pfam | Protein kinase domain | 68 | 336 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe01g2343 | 385 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe01g2343 | 385 | Gene3D | Phosphorylase Kinase; domain 1 | 37 | 142 | - | - | |
Hepe01g2343 | 385 | ProSiteProfiles | Protein kinase domain profile. | 67 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe01g2343 | 385 | MobiDBLite | consensus disorder prediction | 350 | 385 | - | - | |
Hepe01g2343 | 385 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 357 | - | - | |
Hepe01g2343 | 385 | SMART | serkin_6 | 67 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe01g2343 | 385 | FunFam | probable serine/threonine-protein kinase RLCKVII | 38 | 142 | - | - | |
Hepe01g2343 | 385 | ProSitePatterns | Protein kinases ATP-binding region signature. | 73 | 95 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g2343 | Hepe-Chr1:87975029 | Hepe08g1508 | Hepe-Chr8:18894900 | 2.91e-196 | dispersed | |
Hepe07g1580 | Hepe-Chr7:54699284 | Hepe01g2343 | Hepe-Chr1:87975029 | 2.20e-82 | dispersed | |
Hepe01g2343 | Hepe-Chr1:87975029 | Hepe02g0369 | Hepe-Chr2:3465567 | 3.06e-94 | wgd | |
Hepe01g2343 | Hepe-Chr1:87975029 | Hepe08g1507 | Hepe-Chr8:18875861 | 3.68e-88 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72505 | PF00069 | Pkinase | 1.00E-44 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g2343 | - | - | - | 0.0 |