Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g2365 ATGGCCCTCAAAGTGCTTTCCGCTCTCGACACTGCCAAAACCCAATTGTACCATTTCAAAGCCATCGTCATCGCCGGCATGGGTCTCTTCACCGACGCCTACGATCTCTTCACCATCACTCCCATCATGACCCTCGTCGGACGTGTCTACTACCACGACCAACACTACGAAACTCCTGCCACCGTTAAATCCGCTATGTTGGCCGTCGCCCTTCTCGGGACGGCCATCGGTCAACTCGTCTTCGGCATACTCGGCGACCGAGTGGGACGCCGCCGCGTCTATGGACTCGCATTGGCCCTCATGATCCTCAGTTCAATCGGATGCGGATTCTCAATCTGCACCACGAGGTCCTGCGTCCTACTCAGCCTCGGCTTCTTCAGGTTCCTTCTCGGACTGGGAATTGGGGGAGATTACCCATTGTCGGCCACCATAATGTCCGAATTCGCCAACAAGAAGACACGTGGCGCCTTCATAGCCGCGGTGTTCTCGATGCAGGGATTGGGGATCTTAGCCAGCTCCACCGTCACCATGATCGTCTGTTCCATATTCGATCGGGCCTCAAATTACCCGCCAAATGATCGTACGCCGATGGGGGCCGATATTGCTTGGCGGTTGATTCTCATGCTCGGCGCCGTTCCGGCCGCGATGACTTATTACTGGCGAATGATGATGCCGGAAACTGCCAGATACACGGCCTTGGTAGAGCGCAATGTGGCACAAGCAGCAAAGGACATGGAGAAAGTGTTGGATGTATCATTGGTTGATATCACAGAAGACAGCCCTCTCTCCCCTTCACCCCCAAATTTCTCCTTATTCTCCAACCAATTCCTCCGTCGCCATGGCCGCGACCTCTTCTCCTGCGCCGCCGCTTGGTTTCTCGTCGACATCGTTTTCTACAGCAGCAACCTCTTCCAATCCAAAATCTACACCCAATTCCTCCGCCCCAAACAAAACGTCAACGTTTTCCGAGACGCCTTCAACGAAGCAAAACTCCAAGCCATCGTCGCCGTCTGCTCCACCATTCCCGGCTACTGGGCCTCCGTCTATTTCATCGACCGTCTCGGCCGAGTCAAAATCCAAATCATCGGATTCTTGTTCATGGCGATCGGCTACTTCTCCATCGCCATCCCCTACCACAAATATTGGTCCTCCGACCAACACAGATACGGATTCATGGTCATCTACTGCCTCACGTTCTTCTTCTCAAACTTCGGCCCCAACACCACCACTTTCATCCTCCCCGCGGAGCTGTTCCCGGCGAGATTCAGATCCACCTGCCATGGAATCTCCGGCGCGGCGGGGAAAGTCGGGGCCATAATCGGCGCGGTGGGGTTCCTCTGGGGTTCGCACGACGAGAAAGAGAACGGGTACCCGAAAGGAATTGGGATAAAAGCGTCGCTGATGATACTGGGTGGGGTGAGTCTGGTGGGAGTGGTGGTCACGTATTTGTTCACCAGAGAAACAAGGGGAAGGTCGTTGGAGGAGAATGAGAGCGAAGATGAATACGCTGGCGTTTGCTTTCTCAGATGCTTTCCCCACAATACGCCTTGCTGCCCTCGTCCGTCTAATATTCAGGAACATGATGACGTGTCGCAGCTTGACGGTGCCGATGATGGATTCTGCGATTTTTGCTTCTGCGGAAGGCGCAGCCGTAATGGTGCGAGTCTCCGCCTGTTCGGTTTCTTCTGGTTCCTCCTTCTGGAAATCGGAATGTGGAGCTTTCATTGCGGAATGCAAGGTTCTGAACACTCGATGGTGATTCTGATGGTGGTTGCTGTTCCAGGTATGATGACGAATACAATTATGCCTGAAATTGCTACGATGTTCTTGCGTATTTCTTGA 1842 53.75 MALKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFTITPIMTLVGRVYYHDQHYETPATVKSAMLAVALLGTAIGQLVFGILGDRVGRRRVYGLALALMILSSIGCGFSICTTRSCVLLSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGLGILASSTVTMIVCSIFDRASNYPPNDRTPMGADIAWRLILMLGAVPAAMTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVSLVDITEDSPLSPSPPNFSLFSNQFLRRHGRDLFSCAAAWFLVDIVFYSSNLFQSKIYTQFLRPKQNVNVFRDAFNEAKLQAIVAVCSTIPGYWASVYFIDRLGRVKIQIIGFLFMAIGYFSIAIPYHKYWSSDQHRYGFMVIYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKVGAIIGAVGFLWGSHDEKENGYPKGIGIKASLMILGGVSLVGVVVTYLFTRETRGRSLEENESEDEYAGVCFLRCFPHNTPCCPRPSNIQEHDDVSQLDGADDGFCDFCFCGRRSRNGASLRLFGFFWFLLLEIGMWSFHCGMQGSEHSMVILMVVAVPGMMTNTIMPEIATMFLRIS 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 88093289 88098167 - Hsped.01g23650.1 Hepe01g2365 561475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g2365 613 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe01g2365 613 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 496 - -
Hepe01g2365 613 SUPERFAMILY MFS general substrate transporter 9 499 IPR036259 -
Hepe01g2365 613 Pfam Sugar (and other) transporter 23 497 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe01g2365 613 Gene3D MFS general substrate transporter like domains 17 505 IPR036259 -
Hepe01g2365 613 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 489 IPR020846 GO:0022857(InterPro)
Hepe01g2365 613 CDD MFS_PhT 22 488 - -
Hepe01g2365 613 FunFam Inorganic phosphate transporter 1-6 17 504 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2365 Hepe-Chr1:88093289 Hepe05g1654 Hepe-Chr5:66419052 2.60e-178 dispersed
Hepe01g2365 Hepe-Chr1:88093289 Hepe06g1928 Hepe-Chr6:70496012 6.80e-184 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g2365 K08176 - csv:101218554 854.358