Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0006 ATGTATGCCAAGTACCAAGAGACTGTTGATGCTTTGCGGCACGAGCAGATGGGAAGGAAAGAAGCTGAAGCAGTTCTGCAAAGGGTGCTATATGAATTAGAGGATAAAGCAGAAGTCATTTTAGAGGAAAGAGCGGAACATGAGAGAATGATAGAGTCATATTCACTATTAAACCAAAAATTGCAGAATTCTATTTCTGAACAGGCAATTTTGGAGAAAACTGTTCAAGAATTAAAGGCTGATTTGAAGAGACATGAGCGTGATTGCATGTTAATTCAGAGAGAGAATATTGACCTTTCAAGACAGGTTACAATTCTTCTAAAGGAATGTCGAGATGTGCAACTTCGCTGTGGATATACTGGACATGATGTTCTTGAGAATCTTTCGAATACTACATCCTTTGAGATCAATGTAGAATCTGATGCTGATAGAGTTATTTCCGAATACCTTTTAACCTTCAAGGACATAAATGGATTAGTTGAACAGAATGTCCAGCTTAGAAGCCTTGCACGTAAACTTTCTGTGCAGCTTCAAGATACAGAGCTTGATTTCAAGGAGAAATTGGAGGTTGAGCTGAAAAGGCAGACTCAAGAAGCTGCATCTAGAGTTGAAGCAGTGTTACAAAAAGTTGAAGAGCAGGGACAGATGATTGAGTCACTTCATGCCTCCGTTGCCATGTACAAAAGGCTATATGAAGAGGAGCATAAGCGTAATATGCCTCATCCCTTATCTGCTGGAGTTGTTCTAGATTTTGGTAGGAAGGAACTCGAGTTTGTTTCTGAAGATTCTCAGGAAGCCACAAAGGTTGCTCAGGAGCAGGCTGCTAAACGAGTAAGATATCTTGAAGAAGAGCTTGAAAAATCAAGAAGCGAGATAAATTTTGTACGAGCTGAACGTAACAAGTTTGAACTGGAGGCGGGTTTTGCTAAAGAAAAACTGGATAGTTTCATGAAGGAATGCGAACAACAGAGGGTAGAAATGAATGGTGTGTTAGCCCGGAATGTAGAGTTCTCGCAACTTATTGTAGACTACCAAAGAAAACTGCGGGAAGTTTCAGAATCCTTGCACAGTGCTGATGACCATTCCCGGAAATTGAGTATTGAGGTGTCTGTCCTAAAGTCTGAAAAGGAGTTGTTATCCAATGCTGAAAAGAGAGCACATGATGAAATTCGAAATCTATCTGAAAGATTTTTCCGTGTGCAGGCTTCTCTGGATACCATTCGAAGTGTTGAAGAAGTTCACGAGGAGGCTAGGGTTGTAGAAAGGAGAAAACTGGAGGAACGTGCTAAGCAACTTGAGAGGGAATGGGCTGAGGCAAAGAAAGAGTTGCAAGAAGAAAGGGACAATGTTCGAACTCTCACTCTTGATCGTGAGAAGACTTTGAAGAATGCAATGGGTCATGTTGAAGAGATGGGAAAGGAACTAGCAAATGCACTACACGCCACTGCTGCTGCTGAGGCAAGAGTTGGTGTTGCTGAGGCCAAAATGTCTGATCTGGAGAAGAGAATTAGTTCTTCAGACAATCAGGTCGTGGAGTTGGATGATAGGAGTGGACTTACGTCTCAGCCTTCAAATCAGGTTGGCACAGATTTGCGTAGGGCAGAGGCAGAGATTCAAAAATTTAAAGAAGAAGCACAAGCTTCTAAAGATCATATGCTACAGTACAAGAGCATTGCTCAGGTGAATGAAGAAGCTGTGAAACAGATGGAATGTGCTCATGAATCTTTCAAGATTGAGGCTGAGAAAATGAAGAAATCATTAGAAGTCGAACTTCTTCAGCTTCGAGAGAGGGTTGCTGAACTCGAAAATGTATCTATCTTAAAATCTCAAGAAATAGCTTCTGCTGCTAGTTTAAAGGAAGAGGCTATTGCATCTTCTCTGGCAGATGTTAGAAAGCTGAATGAAGAGAATGCTGCAAAAACGTCCAAGCTTCAGGAAATGGAAATTCAAATAGCTTATTTGAAGGAAGATTTGGAAAGGTTACAGCAAAAATGGCGTACTGCTCAAGCTAATTACGAAAGACAGGTTATTCTCCAGTCAGAGACGATTCAGGAGCTGACAAAAACATCACAAGCATTGGCTTCTGTACAAGAGGAAGCAATTGAGCTTCGTAAATTAGCCGATGCTTACAAAATAGACAATGATCAACTAAAGGCCAAGTGGGAAGGAGGGAAAGTAGCACTTGAGGATTTCAAGAATAAAGCGGACAAGGCATACACCGAACTCAATGAACAGAATAAAATTCTGCATGCTCAAGTTGAGGCTTTCCACATTCGATTGGCGGAGAAAGATCGAAAGTTGGCTGGAGTTTCTTCTGAAAGTAGTACAACCGAAATCGTTGCGGATGCTGGTATACAGAGTGTAGTTAGTTACCTCAGACGAACAAAAGAAATTGCTGAAGTAGAGATCTCCTTGCTAAAGAAGGACAAGTTGAGATTGCAGTCACAATTAGAAAATGCTCTTAAAGCCGCAGAGAGTGCACAAACTTCACTTAATGCTGAACGTCAAAGCTCAAAAGCATTGTTGTTAACCGAGGAGGAAATTAAGTCTTTACAACTTCAGGTCAGGGAGATGAACTTGCTTCGTGAAAGCAATATCCAACTGCGAGAAGAAAATAAGCACAATTTTGGGGAATGCCAGAAACTGCGTGAAGAATCTAAAAAGGCTAAAAGTGTGATAGAGAAGTTTGAGGGCATGCTGAAGATGAGACAAATGGAGGTGGAGTCCTGTAAAATTGAAATTGAATCGCAGAAAGTGGAGAAGGCTCATCTTGAAAGCAGAGTCTCTGAGTTGCTTGAAAAATCAAAGAATATAGATTATGAAGATTATAATCGTGTGAAGGATGATGTTCAAAGAATGCAGATGGAGCTGAATGAGAAAGATGTAGAAATTGCAAAAATCAAAATGTTAATCTCTGAAAGACAGGAATCAATATCTCAATTGGAGCAAGACCTTTCTAATTGCAGATTCGAACTAAAAGAAAGGGAAAAGAAGCTGAATGATATTCAACATATTGAGGCCAATCTGAGGGCAGATATGGAGAAACAGAAGAAGTTCTTTTCTCAGTTTAAGAGAAAGCTTGAAATTGTCTCAAAGGAGAAGGATGAATTAGGAAAAGAGAATCAAGCTCTTTTGAGGCAGTTGGAAGACATTAAACAAGTGACTGCCGGGAAAAGGTCTACTGGAGATTCAACTGGTGAACAGGCCATAGAAGAAAAGGATACTAAAATTCAGATTCTTGAGAAACATCTGGAGAGGCTGAGAGAAGAACTAAAAAGAGAGAAGGAAGATAGTCGTACAGAGAAAAGCAGGCGGTTGAAAATTGAGAAGGCAATAAAGGATTCTTATACTATAGTCGAGCAGGAAAAATCAAAGATTTTAAATGAGTTGGAGAAGCATAGGGGAAACTTGAAGCAGGTTTCTGATGAACTTGAGAAGCTTAGACAATCTAAAAGCAATCTGTCGGAGGATGCTTTAGTTCAGCCTCTTTCAGTGATTGGTTTGGACGATCTTGCTTCTACCTACGTTTTAGCTGCTGAAAATTTCGAGAAGACTGTGCAGTCAGTTTTGACTGATCTTGGAGCTCAAAATGTTCCTTCAGATGTTTCTCTGGTCACAGATGCTCTCGTACAAACTAGTACAGGTCCTGATGTTCCTCTCCAAATGCCTGATGTTGCATTGCCAGTGGCTCCTGTAACAACTAACTTTCCTGCCAAAGCCTTGGAAGAAAGGGAAAAGAAAGGTCATTTATCTAAGGCAAAAGTAGAAACGCGTAAAACAGGGCGGAAGTTGGTTCGACCTCGTCTTGGAAAACCAGAAGGAGGGCCTCAGGGTGATATAGACATGTCAGCTTCAGAATTACCAAACACTGAAAGCAAGCGTGCAACTTCTGGAAAATCAGAAACTGAAGGTGAATCAACGACATCAACCCATCAGCTGGCTCGCAAGCGTGTAGCTTCATCAACTTCTGAATTGCATGAACATTTTATCCATGGGGAGAGCAGTACTGAAATGGCAGCTCCTGTCATGAAGAAGGCTAAAGGGTCAGATACCTTGCCTGATGACGTTGGTGGACCATCCTCTACCTCTTTGGAAAGTCTCAAAACTCAGCCACCCTTTGAAGAAGTTTCTGATGTTTGTGAGTTTCCTCAGGGTTCAAATGAGGATGCAGCTGATGTTGAAAAAGAGGTTGAAATTGTAGGGGAGAAGGCTGATAGGCCAAAAGAACTATCATCACCGGATGGATCAATGAGCCATGATGAGATGCATACCGACAGAAAAGAAACGCTGGATGAGAATCTGGATAGGCAGATTGGAGCAGAGGTGTCAGATGATGGACTAAAAGATCAGGCTGAAGCAGACAACTGGATTCTAACTTCGGAGATTGGAACCGAGAGAGAGGAAGGTGAGCTGGCACCTGAAGTTATGGAACTCGAGGGTGGTAATAATATTGAAAGCGTTGAAATAGGGGAGGATCATACTGAACAGATTGCAACACCTGATGCTTCCCCATCTGGAGTTGATGATGATGCGTTGGCTGTCACAGGCACAGCCATGGAGATCGGAGAGATCAACTCTCCTGAGATCCAAAATGAAGAGAAGAATGATGACGGTGATATAGCTGATGAAACTTCCGAAATTTTAGATAAGTCAACTGATTGCAACCAGATTGATGTGGAGAGTGATCAGGCTGTTGAAACTACCTCAGTAGCTACAGAGAATATTCCAAGTACACCACCAGAAATAAATGATTCGAAACAAGGTAGTCCTACTGTTGCTAAAAGGTCTTCTCCTGTCAGTGGTAGCACGTCTACTACAATAAATTTGCAAGAGCGAGCCAAGGAAAGAGCTATGCTCAGACAGGCTGGAGTTGTTTCTTCATTGGATAGACGCCCTGTGAGAGGATTACGTGGTCGGGGTGGTCGGATAGAGCGTGGTGGCCGTGGTCAACGATCTGGGCGGGGACCACCTGGTGGTGAATCTAATAGAAGTTGA 4995 41.88 MYAKYQETVDALRHEQMGRKEAEAVLQRVLYELEDKAEVILEERAEHERMIESYSLLNQKLQNSISEQAILEKTVQELKADLKRHERDCMLIQRENIDLSRQVTILLKECRDVQLRCGYTGHDVLENLSNTTSFEINVESDADRVISEYLLTFKDINGLVEQNVQLRSLARKLSVQLQDTELDFKEKLEVELKRQTQEAASRVEAVLQKVEEQGQMIESLHASVAMYKRLYEEEHKRNMPHPLSAGVVLDFGRKELEFVSEDSQEATKVAQEQAAKRVRYLEEELEKSRSEINFVRAERNKFELEAGFAKEKLDSFMKECEQQRVEMNGVLARNVEFSQLIVDYQRKLREVSESLHSADDHSRKLSIEVSVLKSEKELLSNAEKRAHDEIRNLSERFFRVQASLDTIRSVEEVHEEARVVERRKLEERAKQLEREWAEAKKELQEERDNVRTLTLDREKTLKNAMGHVEEMGKELANALHATAAAEARVGVAEAKMSDLEKRISSSDNQVVELDDRSGLTSQPSNQVGTDLRRAEAEIQKFKEEAQASKDHMLQYKSIAQVNEEAVKQMECAHESFKIEAEKMKKSLEVELLQLRERVAELENVSILKSQEIASAASLKEEAIASSLADVRKLNEENAAKTSKLQEMEIQIAYLKEDLERLQQKWRTAQANYERQVILQSETIQELTKTSQALASVQEEAIELRKLADAYKIDNDQLKAKWEGGKVALEDFKNKADKAYTELNEQNKILHAQVEAFHIRLAEKDRKLAGVSSESSTTEIVADAGIQSVVSYLRRTKEIAEVEISLLKKDKLRLQSQLENALKAAESAQTSLNAERQSSKALLLTEEEIKSLQLQVREMNLLRESNIQLREENKHNFGECQKLREESKKAKSVIEKFEGMLKMRQMEVESCKIEIESQKVEKAHLESRVSELLEKSKNIDYEDYNRVKDDVQRMQMELNEKDVEIAKIKMLISERQESISQLEQDLSNCRFELKEREKKLNDIQHIEANLRADMEKQKKFFSQFKRKLEIVSKEKDELGKENQALLRQLEDIKQVTAGKRSTGDSTGEQAIEEKDTKIQILEKHLERLREELKREKEDSRTEKSRRLKIEKAIKDSYTIVEQEKSKILNELEKHRGNLKQVSDELEKLRQSKSNLSEDALVQPLSVIGLDDLASTYVLAAENFEKTVQSVLTDLGAQNVPSDVSLVTDALVQTSTGPDVPLQMPDVALPVAPVTTNFPAKALEEREKKGHLSKAKVETRKTGRKLVRPRLGKPEGGPQGDIDMSASELPNTESKRATSGKSETEGESTTSTHQLARKRVASSTSELHEHFIHGESSTEMAAPVMKKAKGSDTLPDDVGGPSSTSLESLKTQPPFEEVSDVCEFPQGSNEDAADVEKEVEIVGEKADRPKELSSPDGSMSHDEMHTDRKETLDENLDRQIGAEVSDDGLKDQAEADNWILTSEIGTEREEGELAPEVMELEGGNNIESVEIGEDHTEQIATPDASPSGVDDDALAVTGTAMEIGEINSPEIQNEEKNDDGDIADETSEILDKSTDCNQIDVESDQAVETTSVATENIPSTPPEINDSKQGSPTVAKRSSPVSGSTSTTINLQERAKERAMLRQAGVVSSLDRRPVRGLRGRGGRIERGGRGQRSGRGPPGGESNRS 1664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 151572 199906 - Hsped.02g00060.1 Hepe02g0006 561507

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0006 1664 Coils Coil 1070 1104 - -
Hepe02g0006 1664 Coils Coil 693 720 - -
Hepe02g0006 1664 MobiDBLite consensus disorder prediction 1238 1434 - -
Hepe02g0006 1664 Coils Coil 940 963 - -
Hepe02g0006 1664 Coils Coil 30 102 - -
Hepe02g0006 1664 Coils Coil 482 516 - -
Hepe02g0006 1664 Coils Coil 796 834 - -
Hepe02g0006 1664 Coils Coil 1123 1157 - -
Hepe02g0006 1664 Coils Coil 415 449 - -
Hepe02g0006 1664 MobiDBLite consensus disorder prediction 1490 1664 - -
Hepe02g0006 1664 PANTHER NUCLEOPROTEIN TPR-RELATED 1 1654 - GO:0005643(PANTHER)|GO:0006406(PANTHER)|GO:0017056(PANTHER)
Hepe02g0006 1664 Coils Coil 193 213 - -
Hepe02g0006 1664 Coils Coil 271 305 - -
Hepe02g0006 1664 MobiDBLite consensus disorder prediction 1632 1649 - -
Hepe02g0006 1664 MobiDBLite consensus disorder prediction 1355 1370 - -
Hepe02g0006 1664 Coils Coil 577 604 - -
Hepe02g0006 1664 Coils Coil 728 752 - -
Hepe02g0006 1664 Coils Coil 524 551 - -
Hepe02g0006 1664 Coils Coil 879 899 - -
Hepe02g0006 1664 MobiDBLite consensus disorder prediction 1283 1319 - -
Hepe02g0006 1664 Coils Coil 978 998 - -
Hepe02g0006 1664 Coils Coil 372 396 - -
Hepe02g0006 1664 MobiDBLite consensus disorder prediction 1239 1269 - -
Hepe02g0006 1664 Coils Coil 841 861 - -
Hepe02g0006 1664 Coils Coil 907 934 - -
Hepe02g0006 1664 MobiDBLite consensus disorder prediction 1388 1434 - -
Hepe02g0006 1664 Pfam TPR/MLP1/MLP2-like protein 630 755 IPR012929 GO:0006606(InterPro)
Hepe02g0006 1664 Coils Coil 1027 1054 - -
Hepe02g0006 1664 MobiDBLite consensus disorder prediction 1557 1611 - -
Hepe02g0006 1664 Coils Coil 630 675 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0006 K09291 - - csv:101216510 2672.89
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1185 . . . . . . . . . . . . . . . . . Bhi05g01976 . . Lac12g0024 Hepe02g0006 . . . . . . . . . . . . . . Csa07g01225 . . . . . . Bpe15g00929 . Bma03g00486 . . . . . . . . Cpe15g00913 . . . . . . . . . . . . . . . . . Chy01g00837 Cme01g01492
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004038 1 2 1 1 1 1 1 2 2 3 1 1 1 3 2 1 1 1 1 1 1 1 1 3 3 1 1 2 1 1 43