Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0011 ATGTTAAAGATCTTGTTTGTTTTTGTTTTCTTGAATCTGACCCTGGTCCACGGCGGCGGCGGGCGGGAGTCATCATGTACTTGTGGTGACTCCGAGGCCGGCGCGGAGCAGAACGCGAAGGAAGCAATCAAATACAAGGTGGGTTCGATTGCTTCGGTGCTGGTGGCTGGAGCTGCGGGTGTGAGCCTTCCTTTGGCGGGGAAGAAGATTCCGTGTCTGAGGCCTGAAAATGACATATTTTTCATGATCAAGGCTTTTGCTGCTGGGGTTATTTTAGGCACTGGCTTCATCCACATACTGCCCGATGCCTTCCAAGACCTGACCTCACCTTGCCTCGGGCAGAGTCCTTGGGGCGATTTCCCCTTTGCCGGGTTCATTGCAATGGCATCCTCCATCGCCACCTTGATGGTCGACACGTTTGCAACCAGCTTTTACCAGAGGCGCCACTTCAGTAAAACCAAGCAGGTAATTGTAGACCAGGAAAGAGGGGAGGAGCATGCTGGTCACGTGCATGTCCACACTCATGCTACACATGGCCACGCTCACGGCTCCGGCTCCGGCTCCGGACCAGAATCGAGTCTGTCTGAGTTAATCCGGTACCGGATTATATCTCAGGTGTTGGAATTGGGAATTGTTGTTCATTCGGTAATAATAGGGATATCTCTTGGTGCCTCCCAGAGCCCTGCCACCATTAAGCCACTGCTCGTAGCTCTGTCTTTCCACCAGTTTTTTGAGGGCATGGGACTCGGTGGCTGCATTTCCCAAGCACAATTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTCTCACTGACAGCGCCTGTGGGAATTGCAGTGGGAATCGGAATCTCAGGAGTTTACAGAGACGACAGCCGGACGGCTCTGATCGTGGAAGGAAGCATGAACTCTGCATCGGCAGGGATATTGATATACATGGCGCTAGTGGACCTTCTTGCCGCGGATTTCATGAACCCAAGAATGCAAAACAATTTGGGCCTTCAATTAGGAGCTAATATCTCTCTTCTTCTTGGGGCTGCTTGCATGTCTGTATTGGCCAAATGGGCTTAA 1071 51.91 MLKILFVFVFLNLTLVHGGGGRESSCTCGDSEAGAEQNAKEAIKYKVGSIASVLVAGAAGVSLPLAGKKIPCLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCLGQSPWGDFPFAGFIAMASSIATLMVDTFATSFYQRRHFSKTKQVIVDQERGEEHAGHVHVHTHATHGHAHGSGSGSGPESSLSELIRYRIISQVLELGIVVHSVIIGISLGASQSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAAAMATFFSLTAPVGIAVGIGISGVYRDDSRTALIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGANISLLLGAACMSVLAKWA 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 276517 277885 - Hsped.02g00110.1 Hepe02g0011 561512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0011 356 PANTHER ZINC/IRON TRANSPORTER 40 355 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Hepe02g0011 356 NCBIfam ZIP zinc/iron transport family 30 356 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Hepe02g0011 356 Pfam ZIP Zinc transporter 44 353 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1506 Hepe-Chr1:80292630 Hepe02g0011 Hepe-Chr2:276517 7.00e-119 dispersed
Hepe02g0011 Hepe-Chr2:276517 Hepe07g1627 Hepe-Chr7:57031987 5.84e-107 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0011 K14709 - csv:101216720 507.679