Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0014 ATGGCCGCCACTGCTTCGCTCTTCAGATCTGCACCCGCCGCATCTTTTGTTCAACCGTCCCTTCCTCTCTCTTCTGCCGATCATTCTACGGCTTCGTGCGTTAATTTGAATTCTTCCAAGTTTCAATCCAGCATTTTCGGCGCCCACGTTTCAACCGGATCATCTTCCTTGCAGCTTCGTAGAACCCACAATATTCAACCTATTAAAGCTACAGCTACTGAAATACCTCCCACCCTTCACAAATCAAGGAGCGGCGGAAAGACGAAGGTCGGAATCAATGGTTTTGGACGTATTGGAAGGTTGGTACTGCGGATTGCAACCTCGAGGGATGATATTGATGTTGTTGCAGTTAATGACCCTTTTGTTGATGCAAAGTACATGGCATACATGCTCAAGTTTGATTCTACACACGGTAATTTTAAGGGCACGACTAACATTGTGGATGATTCAACTTTGGAAATCAATGGGAAACAAATAAAAGTTTTAAGTAAAAGGGATCCAGCAGAAATTCCTTGGGGCGAGTTTGGGGTTGAGTTTGTTGTTGAATCCTCCGGGGTTTTCACAACAACAAATAAGGCATCGGCACACTTGAAGGGTGGAGCCAGGAAAGTTGTCATATCAGCTCCATCAGCTGATGCACCTATGTTCGTTGTTGGAGTTAATGAGAAGACATATAAGCCAAGCATGGATATTGTTTCAAATGCAAGTTGTACCACAAATTGTCTTGCTCCTCTTGCGAAGGTTGTTCATGAGGTTTTTGGTATCGCAGAAGGTCTGATGACAACCGTGCATGCAACTACAGCTACTCAAAAAACTGTTGATGGCCCCTCAATGAAGGATTGGCGTGGGGGTCGTGGAGCTGCACAAAATATCATCCCGAGTTCTACCGGTGCTGCAAAGGCTGTGGGAAAAGTTCTTCCTGAGCTCAACGGAAAACTTACAGGGATGGCATTTCGTGTTCCAACACCTAATGTATCTGTTGTGGACTTGACTTGTAGACTAGAGAAGAGTGCTTCTTATGAAGATGTCAAAGCTGCAATCAAGTATGCCTCAGAAGGCCCACTCAAGGGTATCCTCGGTTACACGGACGAAGACGTTGTCTCCAATGATTTTGTTGGTGACTCAAGGTCAAGTATATTCGATGCAAAGGCCGGAATAGGTCTGAGCGACTCGTTCATGAAGCTTGTCTCCTGGTATGACAACGAGTGGGGATACAGCAACCGAGTGCTGGACCTCATAGAGCACATGGCGTTGGTGGCAGCCAACAAGTGA 1272 45.99 MAATASLFRSAPAASFVQPSLPLSSADHSTASCVNLNSSKFQSSIFGAHVSTGSSSLQLRRTHNIQPIKATATEIPPTLHKSRSGGKTKVGINGFGRIGRLVLRIATSRDDIDVVAVNDPFVDAKYMAYMLKFDSTHGNFKGTTNIVDDSTLEINGKQIKVLSKRDPAEIPWGEFGVEFVVESSGVFTTTNKASAHLKGGARKVVISAPSADAPMFVVGVNEKTYKPSMDIVSNASCTTNCLAPLAKVVHEVFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSDSFMKLVSWYDNEWGYSNRVLDLIEHMALVAANK 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 289718 294044 - Hsped.02g00140.1 Hepe02g0014 561515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0014 423 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 89 189 IPR020828 GO:0051287(InterPro)
Hepe02g0014 423 SMART gp_dh_n_7 88 237 IPR020828 GO:0051287(InterPro)
Hepe02g0014 423 Gene3D Dihydrodipicolinate Reductase; domain 2 237 403 - -
Hepe02g0014 423 Gene3D - 89 416 - -
Hepe02g0014 423 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 235 242 IPR020830 GO:0016620(InterPro)
Hepe02g0014 423 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 242 399 IPR020829 GO:0016620(InterPro)
Hepe02g0014 423 FunFam Glyceraldehyde-3-phosphate dehydrogenase 236 401 - -
Hepe02g0014 423 FunFam Glyceraldehyde-3-phosphate dehydrogenase 88 247 - -
Hepe02g0014 423 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 236 399 - -
Hepe02g0014 423 NCBIfam glyceraldehyde-3-phosphate dehydrogenase, type I 89 411 IPR006424 GO:0006006(InterPro)|GO:0016620(InterPro)|GO:0050661(InterPro)|GO:0051287(InterPro)
Hepe02g0014 423 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 87 253 IPR036291 -
Hepe02g0014 423 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 83 417 IPR020831 GO:0016620(InterPro)
Hepe02g0014 423 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 355 370 IPR020831 GO:0016620(InterPro)
Hepe02g0014 423 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 196 209 IPR020831 GO:0016620(InterPro)
Hepe02g0014 423 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 315 332 IPR020831 GO:0016620(InterPro)
Hepe02g0014 423 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 231 249 IPR020831 GO:0016620(InterPro)
Hepe02g0014 423 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 258 274 IPR020831 GO:0016620(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0014 Hepe-Chr2:289718 Hepe07g2148 Hepe-Chr7:65760514 8.84e-173 dispersed
Hepe01g2355 Hepe-Chr1:88056232 Hepe02g0014 Hepe-Chr2:289718 1.04e-107 transposed
Hepe02g1624 Hepe-Chr2:21708330 Hepe02g0014 Hepe-Chr2:289718 5.21e-100 transposed
Hepe02g3372 Hepe-Chr2:83247353 Hepe02g0014 Hepe-Chr2:289718 1.96e-150 transposed
Hepe02g0014 Hepe-Chr2:289718 Hepe08g0647 Hepe-Chr8:5772166 1.04e-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0014 K00134 - csv:101215988 773.852