Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0024 ATGAGGAAGAAACGTAATAACGAGAAAAAGAAGGTAACTCTACCGCCAGAGCTTCCACCGGAGGTCACCGAGGAGGAAATTGAGGTCTCCGATGAGGATTTGCAGTTTGTCAAGGAGAACCGAGACTATGCCGTCTCTGTTTCCCGTCTAGACACTGAATCCATTACCAAGCATGTTACGCGTGTTGCTGATGTTGAAGAAGATGCTTTGGAGGCTTTATACGAGAAGCGTTTGCGCAAGAAGTCACTGCAGAAACAGGAGGAGGAAACTAAGCCCCAGGTTGTTGATCGCGTGGATGCTCTTCCTGTCAAAACACTTGACGGGAAACTCTACTACCGGACCTCAAAAGCATCCGATGCACCTGAGAATGCTGCGAATGAAGAGGCAGAAGAAGACGACTCAGTAGATAATAGTATATTGAAGTTAACTAAAGCAGAAAGGAGGGCAAAACAAAAGAAAATTAAGAAGGTTGGCAAGAAACAAGAGGATGTAACCAAATTTCAAGAAGTTCAACCAACCCCACAAGCAGCAGTTGTGGCTGAAGTGATAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAACAGAAACTTGCAGAGATTGGAATTGCATTGCTGTCAGACCCAAATTCCAATATTAAATCTTTGAAGGAGATGCTACAGATCGCTAAGGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTCTTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTAGAAATGAAAGTATCCAAGGATGTTAAGAAAATGCGGTACTATGAGTCTACTCTTCTCACTGTTTATAAGGGATACCTGCAGAAGCTAATATCATTAGAAAAACTGAAGTCATTTCAGCACGTGGCTATTCGCTGTATCTGTACTTTGCTTGATGCAGTTCCCCACTTCAACTTTCGAGAGACATTGTTAGATATCGTTGTTAAAAACATAGGCTCCCCTGACAATGCTGTAAGAAAACTTTGTTGTGGTGCTATTAAATCTTTATTTATCAACGAGGGAAAGCATGGTGGTGAAGCGACTGTGGAGGCTGTCAAGTTGATTGCTATTCTTGTGAAATCTCATGACTGCCAATTGTATCCTGATTCCATCGAGGCTCTGGGGAAAGCAGTAAAGAAAGACGAGCATAGTAAAGCAAAGAACAAAAAACAAAGGAAAATGAAGAATCGTGAGGAACCGAGTCATTTGCAAGGGAATGATGGAAAACAAAGTATGAGGACAAAGTTTACTGAAGAGGTTGCTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGATGTAATTAAGCAACGAGAGATGCAGTCAGATACACTTTCTGCTGTATTTGAAACATATTTCCGGATCTTAAGGCATACAATGCAGTCATTAACTGCTAGGCCTGAAGCAAGTATTACTTTTACTACTGGCTCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGATTGGGGAAATTCTCGCATCTCATTGATTTAGATTTCATGGCTGATCTTATGAATTATCTAAAAAGGCTTGCTTCTGGTGGTGATAATTCTTCTGAGAAACTGTCACAATGTTTGACCGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTAAATGTTGATCTACAGGACTTTTTTGTCCAGCTATACAATATTGTACTTGAGTACAGGCCTGGGAGAGATAATGGTGATGTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTTAAGCATCTTCTTCAGAAAAATCTCAAGTGCCGCAACCTTTTGGAAAATGATGCTGGGGGAGGTTCAGTGTCTGGCACAATCGCGAAATATCAGCCATATGCTTGTGATCCAAATTTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAGCTGTCTCAACGATGGCTGCTAGCATATCAAGCATGAGTAGTACTCAAAACCAAGTATATATCGCCACTATTTCTCCCCAACAGGCATTCAAAGACTTGTCGCTGAAACAGGAGTCTTTTAACCCACAATTTAACGTCAAAAAAGTTAACAAGAGGAAAAAAGCTAGCGAATCTTCTCAGTCTACTCTCGATACGTGCAGCGCCATCGCCATTGACGAAAATGAGGTGAAGGAAAAGCTTTCAACAAGATTCACACTTCTCCGGGACATCAAGGACAATGAAAGATTAAGAGCTGAATTGGACCGTACCTCTTTGTCGTTGCAGCTATATGAAGAATACAAAAGGCAAAAGAAAAAATCTAAAAAGTCGAGGAATATTTGA 2463 41.37 MRKKRNNEKKKVTLPPELPPEVTEEEIEVSDEDLQFVKENRDYAVSVSRLDTESITKHVTRVADVEEDALEALYEKRLRKKSLQKQEEETKPQVVDRVDALPVKTLDGKLYYRTSKASDAPENAANEEAEEDDSVDNSILKLTKAERRAKQKKIKKVGKKQEDVTKFQEVQPTPQAAVVAEVIEDLTAEKTFESKKQKLAEIGIALLSDPNSNIKSLKEMLQIAKDNDQAIVKLGLLSFLAVFKDIIPGYRIRLPTEKELEMKVSKDVKKMRYYESTLLTVYKGYLQKLISLEKLKSFQHVAIRCICTLLDAVPHFNFRETLLDIVVKNIGSPDNAVRKLCCGAIKSLFINEGKHGGEATVEAVKLIAILVKSHDCQLYPDSIEALGKAVKKDEHSKAKNKKQRKMKNREEPSHLQGNDGKQSMRTKFTEEVAADYRAASLAPDVIKQREMQSDTLSAVFETYFRILRHTMQSLTARPEASITFTTGSSGSHPLLAPCLNGLGKFSHLIDLDFMADLMNYLKRLASGGDNSSEKLSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLEYRPGRDNGDVLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVKHLLQKNLKCRNLLENDAGGGSVSGTIAKYQPYACDPNLSGALASVLWELNLLWKHYHPAVSTMAASISSMSSTQNQVYIATISPQQAFKDLSLKQESFNPQFNVKKVNKRKKASESSQSTLDTCSAIAIDENEVKEKLSTRFTLLRDIKDNERLRAELDRTSLSLQLYEEYKRQKKKSKKSRNI 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 375842 383855 + Hsped.02g00240.1 Hepe02g0024 561525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0024 820 MobiDBLite consensus disorder prediction 1 27 - -
Hepe02g0024 820 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 4 755 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
Hepe02g0024 820 Pfam CBF/Mak21 family 545 700 IPR005612 -
Hepe02g0024 820 SUPERFAMILY ARM repeat 280 693 IPR016024 -
Hepe02g0024 820 MobiDBLite consensus disorder prediction 390 422 - -
Hepe02g0024 820 Pfam Nucleolar complex-associated protein 195 285 IPR011501 -
Hepe02g0024 820 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0024 Hepe-Chr2:375842 Hepe08g2041 Hepe-Chr8:57271235 0.0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0024 K14834 - csv:101213821 1246.88